RNA–Protein interactions for RNA: ENST00000629088.1

PNKP-222, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-222ENST00000629088 LINC01545Q5VT33 79 aa9.02□□□□□ -0.97
PNKP-222ENST00000629088 NDUFA12Q9UI09 145 aa9.02□□□□□ -0.97
PNKP-222ENST00000629088 LOC107984156A0A0G2JMH3 177 aa9.01□□□□□ -0.97
PNKP-222ENST00000629088 ETDCA0A1B0GVM5 59 aa9.01□□□□□ -0.97
PNKP-222ENST00000629088 LINC00483Q53H64 154 aa9.01□□□□□ -0.97
PNKP-222ENST00000629088 ARL17AQ8IVW1 177 aa9.01□□□□□ -0.97
PNKP-222ENST00000629088 TRBV10-3A0A0K0K1G6 114 aa9□□□□□ -0.97
PNKP-222ENST00000629088 NCR3O14931 201 aa9□□□□□ -0.97
PNKP-222ENST00000629088 SPINK1P00995 79 aa9□□□□□ -0.97
PNKP-222ENST00000629088 Q8NBF4 154 aa9□□□□□ -0.97
PNKP-222ENST00000629088 SMCR5Q8TEV8 140 aa9□□□□□ -0.97
PNKP-222ENST00000629088 SNHG12Q9BXW3 62 aa8.99□□□□□ -0.97
PNKP-222ENST00000629088 TRBV10-2A0A0K0K1G8 114 aa8.98□□□□□ -0.97
PNKP-222ENST00000629088 HSBP1L1C9JCN9 74 aa8.98□□□□□ -0.97
PNKP-222ENST00000629088 DPM2O94777 84 aa8.98□□□□□ -0.97
PNKP-222ENST00000629088 PLNP26678 52 aa8.98□□□□□ -0.97
PNKP-222ENST00000629088 SPATA45Q537H7 98 aa8.98□□□□□ -0.97
PNKP-222ENST00000629088 PAM16Q9Y3D7 125 aa8.98□□□□□ -0.97
PNKP-222ENST00000629088 M0R143 59 aa8.97□□□□□ -0.97
PNKP-222ENST00000629088 PMCHL2Q9BQD1 86 aa8.97□□□□□ -0.97
PNKP-222ENST00000629088 MIEN1Q9BRT3 115 aa8.97□□□□□ -0.97
PNKP-222ENST00000629088 IGKCP01834 107 aa8.96□□□□□ -0.98
PNKP-222ENST00000629088 RPS29P62273 56 aaKnown RBP8.96□□□□□ -0.98
PNKP-222ENST00000629088 KRTAP13-3Q3SY46 172 aa8.96□□□□□ -0.98
PNKP-222ENST00000629088 ATOH7Q8N100 152 aa8.96□□□□□ -0.98
PNKP-222ENST00000629088 DAND5Q8N907 189 aa8.96□□□□□ -0.98
PNKP-222ENST00000629088 B5MCH6 92 aa8.95□□□□□ -0.98
PNKP-222ENST00000629088 LEPROTO15243 131 aa8.95□□□□□ -0.98
PNKP-222ENST00000629088 NMUP48645 174 aa8.94□□□□□ -0.98
PNKP-222ENST00000629088 SSBP3-AS1Q7Z2R9 100 aa8.94□□□□□ -0.98
PNKP-222ENST00000629088 SPANXB1Q9NS25 103 aaPredicted RBP8.94□□□□□ -0.98
PNKP-222ENST00000629088 TSPEAR-AS2P59090 65 aa8.93□□□□□ -0.98
PNKP-222ENST00000629088 GAGE2AQ6NT46 116 aa8.93□□□□□ -0.98
PNKP-222ENST00000629088 Q6ZRX8 168 aa8.93□□□□□ -0.98
PNKP-222ENST00000629088 J3QQQ9 107 aa8.92□□□□□ -0.98
PNKP-222ENST00000629088 NDUFC2O95298 119 aa8.92□□□□□ -0.98
PNKP-222ENST00000629088 HERVK_113P61574 105 aa8.92□□□□□ -0.98
PNKP-222ENST00000629088 UQCR10Q9UDW1 63 aa8.92□□□□□ -0.98
PNKP-222ENST00000629088 ASB16-AS1Q495Z4 193 aa8.91□□□□□ -0.98
PNKP-222ENST00000629088 IGLV6-57P01721 117 aa8.9□□□□□ -0.98
PNKP-222ENST00000629088 MOBPQ13875 183 aa8.9□□□□□ -0.98
PNKP-222ENST00000629088 Q9BRP9 147 aa8.9□□□□□ -0.98
PNKP-222ENST00000629088 FSIP2Q5CZC0 6907 aa8.89□□□□□ -0.99
PNKP-222ENST00000629088 ERC2-IT1O76042 136 aa8.89□□□□□ -0.99
PNKP-222ENST00000629088 Q8N377 158 aa8.89□□□□□ -0.99
PNKP-222ENST00000629088 IGLV9-49A0A0B4J1Y8 123 aa8.88□□□□□ -0.99
PNKP-222ENST00000629088 LGALS3P17931 250 aaKnown RBP8.88□□□□□ -0.99
PNKP-222ENST00000629088 S100A7L2Q5SY68 101 aa8.88□□□□□ -0.99
PNKP-222ENST00000629088 SLC25A20O43772 301 aa8.87□□□□□ -0.99
PNKP-222ENST00000629088 COX8AP10176 69 aa8.86□□□□□ -0.99
PNKP-222ENST00000629088 SEC61BP60468 96 aaKnown RBP8.86□□□□□ -0.99
PNKP-222ENST00000629088 LCE2DQ5TA82 110 aaPredicted RBP8.86□□□□□ -0.99
PNKP-222ENST00000629088 SLC25A34Q6PIV7 304 aa8.86□□□□□ -0.99
PNKP-222ENST00000629088 CBY1Q9Y3M2 126 aa8.86□□□□□ -0.99
PNKP-222ENST00000629088 TRAV23DV6A0A075B6W5 121 aa8.85□□□□□ -0.99
PNKP-222ENST00000629088 E9PLD3 99 aa8.85□□□□□ -0.99
PNKP-222ENST00000629088 LINC01547P58512 204 aaPredicted RBP8.85□□□□□ -0.99
PNKP-222ENST00000629088 KRTAP4-1Q9BYQ7 146 aa8.85□□□□□ -0.99
PNKP-222ENST00000629088 ZNF73O43830 326 aaPredicted RBP8.84□□□□□ -0.99
PNKP-222ENST00000629088 ANKRD39Q53RE8 183 aa8.84□□□□□ -0.99
PNKP-222ENST00000629088 DLEU1O43261 78 aa8.83□□□□□ -1
PNKP-222ENST00000629088 A0A0J9YXY3 114 aa8.82□□□□□ -1
PNKP-222ENST00000629088 COL5A1-AS1Q5SY13 56 aa8.82□□□□□ -1
PNKP-222ENST00000629088 SOSTDC1Q6X4U4 206 aa8.82□□□□□ -1
PNKP-222ENST00000629088 HINT1P49773 126 aaPredicted RBP8.81□□□□□ -1
PNKP-222ENST00000629088 BATFQ16520 125 aa8.81□□□□□ -1
PNKP-222ENST00000629088 ADAMTSL4-AS1Q5T5F5 129 aa8.8□□□□□ -1
PNKP-222ENST00000629088 C9orf153Q5TBE3 101 aa8.8□□□□□ -1
PNKP-222ENST00000629088 XP32Q5T750 250 aa8.79□□□□□ -1
PNKP-222ENST00000629088 EIF4EBP3O60516 100 aaPredicted RBP8.78□□□□□ -1
PNKP-222ENST00000629088 SPANXCQ9NY87 97 aa8.78□□□□□ -1
PNKP-222ENST00000629088 CRCT1Q9UGL9 99 aa8.78□□□□□ -1
PNKP-222ENST00000629088 SPRR1BP22528 89 aa8.77□□□□□ -1.01
PNKP-222ENST00000629088 NPC2P61916 151 aa8.77□□□□□ -1.01
PNKP-222ENST00000629088 ZNF815PA8K554 130 aa8.76□□□□□ -1.01
PNKP-222ENST00000629088 TIMM17BO60830 172 aa8.76□□□□□ -1.01
PNKP-222ENST00000629088 ST20-AS1Q8NBB2 130 aa8.76□□□□□ -1.01
PNKP-222ENST00000629088 DHRS4-AS1Q9P1J3 65 aa8.76□□□□□ -1.01
PNKP-222ENST00000629088 PCP2Q8IVA1 136 aa8.75□□□□□ -1.01
PNKP-222ENST00000629088 LINC00308Q8TCZ7 52 aa8.75□□□□□ -1.01
PNKP-222ENST00000629088 LITAFQ99732 161 aa8.75□□□□□ -1.01
PNKP-222ENST00000629088 HIGD1BQ9P298 99 aa8.75□□□□□ -1.01
PNKP-222ENST00000629088 C2orf91Q6ZV80 131 aa8.74□□□□□ -1.01
PNKP-222ENST00000629088 LIMD2Q9BT23 127 aa8.74□□□□□ -1.01
PNKP-222ENST00000629088 TTTY13Q9BZ97 58 aa8.74□□□□□ -1.01
PNKP-222ENST00000629088 SPANXDQ9BXN6 97 aa8.73□□□□□ -1.01
PNKP-222ENST00000629088 HSD52Q0P140 79 aa8.71□□□□□ -1.02
PNKP-222ENST00000629088 SCGB1D4Q6XE38 83 aa8.71□□□□□ -1.02
PNKP-222ENST00000629088 OR13C6PQ8NH95 151 aa8.71□□□□□ -1.02
PNKP-222ENST00000629088 LAMTOR3Q9UHA4 124 aa8.7□□□□□ -1.02
PNKP-222ENST00000629088 ELOF1P60002 83 aaKnown RBP8.69□□□□□ -1.02
PNKP-222ENST00000629088 TAL2Q16559 108 aa8.69□□□□□ -1.02
PNKP-222ENST00000629088 LCE2CQ5TA81 110 aa8.69□□□□□ -1.02
PNKP-222ENST00000629088 BVES-AS1Q5T3Y7 98 aa8.68□□□□□ -1.02
PNKP-222ENST00000629088 COX7BP24311 80 aa8.67□□□□□ -1.02
PNKP-222ENST00000629088 CD164Q04900 197 aa8.67□□□□□ -1.02
PNKP-222ENST00000629088 TRBV7-6A0A0J9YX20 115 aa8.66□□□□□ -1.02
PNKP-222ENST00000629088 Q6ZVH6 145 aa8.66□□□□□ -1.02
PNKP-222ENST00000629088 TAX1BP3O14907 124 aa8.65□□□□□ -1.02
PNKP-222ENST00000629088 C6orf99Q4VX62 202 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms