RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 GAGE2AQ6NT46 116 aa7.02□□□□□ -1.29
SOX2-OT-247ENST00000628347 Q9BRP9 147 aa7.02□□□□□ -1.29
SOX2-OT-247ENST00000628347 SERF1AO75920 110 aa7.01□□□□□ -1.29
SOX2-OT-247ENST00000628347 DPM2O94777 84 aa7.01□□□□□ -1.29
SOX2-OT-247ENST00000628347 IGLV6-57P01721 117 aa7.01□□□□□ -1.29
SOX2-OT-247ENST00000628347 HERVK_113P61574 105 aa7.01□□□□□ -1.29
SOX2-OT-247ENST00000628347 ASB16-AS1Q495Z4 193 aa7.01□□□□□ -1.29
SOX2-OT-247ENST00000628347 Q6ZRX8 168 aa7.01□□□□□ -1.29
SOX2-OT-247ENST00000628347 HSPB8Q9UJY1 196 aa7.01□□□□□ -1.29
SOX2-OT-247ENST00000628347 MOBPQ13875 183 aa7□□□□□ -1.29
SOX2-OT-247ENST00000628347 MIEN1Q9BRT3 115 aa7□□□□□ -1.29
SOX2-OT-247ENST00000628347 IGLV9-49A0A0B4J1Y8 123 aa6.99□□□□□ -1.29
SOX2-OT-247ENST00000628347 IGKCP01834 107 aa6.99□□□□□ -1.29
SOX2-OT-247ENST00000628347 LGALS3P17931 250 aaKnown RBP6.99□□□□□ -1.29
SOX2-OT-247ENST00000628347 Q8N377 158 aa6.99□□□□□ -1.29
SOX2-OT-247ENST00000628347 KRTAP4-9Q9BYQ8 210 aa6.99□□□□□ -1.29
SOX2-OT-247ENST00000628347 JOSD1Q15040 202 aaPredicted RBP6.98□□□□□ -1.29
SOX2-OT-247ENST00000628347 TRAV23DV6A0A075B6W5 121 aa6.97□□□□□ -1.29
SOX2-OT-247ENST00000628347 S100A7L2Q5SY68 101 aa6.97□□□□□ -1.29
SOX2-OT-247ENST00000628347 C5orf52A6NGY3 159 aa6.96□□□□□ -1.3
SOX2-OT-247ENST00000628347 SLC25A20O43772 301 aa6.96□□□□□ -1.3
SOX2-OT-247ENST00000628347 FABP4P15090 132 aa6.96□□□□□ -1.3
SOX2-OT-247ENST00000628347 SOSTDC1Q6X4U4 206 aa6.96□□□□□ -1.3
SOX2-OT-247ENST00000628347 PMCHL2Q9BQD1 86 aa6.96□□□□□ -1.3
SOX2-OT-247ENST00000628347 A0A0J9YXY3 114 aa6.95□□□□□ -1.3
SOX2-OT-247ENST00000628347 ZNF73O43830 326 aaPredicted RBP6.95□□□□□ -1.3
SOX2-OT-247ENST00000628347 SEC61BP60468 96 aaKnown RBP6.95□□□□□ -1.3
SOX2-OT-247ENST00000628347 KRTAP4-2Q9BYR5 136 aa6.95□□□□□ -1.3
SOX2-OT-247ENST00000628347 CBY1Q9Y3M2 126 aa6.95□□□□□ -1.3
SOX2-OT-247ENST00000628347 E9PLD3 99 aa6.94□□□□□ -1.3
SOX2-OT-247ENST00000628347 EIF4EBP3O60516 100 aaPredicted RBP6.94□□□□□ -1.3
SOX2-OT-247ENST00000628347 ADAMTSL4-AS1Q5T5F5 129 aa6.94□□□□□ -1.3
SOX2-OT-247ENST00000628347 KRTAP4-1Q9BYQ7 146 aa6.93□□□□□ -1.3
SOX2-OT-247ENST00000628347 COLCA2A8K830 154 aa6.92□□□□□ -1.3
SOX2-OT-247ENST00000628347 NPC2P61916 151 aa6.92□□□□□ -1.3
SOX2-OT-247ENST00000628347 C9orf153Q5TBE3 101 aa6.92□□□□□ -1.3
SOX2-OT-247ENST00000628347 SPRR1BP22528 89 aa6.91□□□□□ -1.3
SOX2-OT-247ENST00000628347 HINT1P49773 126 aaPredicted RBP6.91□□□□□ -1.3
SOX2-OT-247ENST00000628347 ST20-AS1Q8NBB2 130 aa6.91□□□□□ -1.3
SOX2-OT-247ENST00000628347 LITAFQ99732 161 aa6.91□□□□□ -1.3
SOX2-OT-247ENST00000628347 SPANXCQ9NY87 97 aa6.91□□□□□ -1.3
SOX2-OT-247ENST00000628347 TIMM17BO60830 172 aa6.9□□□□□ -1.3
SOX2-OT-247ENST00000628347 LINC00308Q8TCZ7 52 aa6.9□□□□□ -1.3
SOX2-OT-247ENST00000628347 LINC01547P58512 204 aaPredicted RBP6.89□□□□□ -1.31
SOX2-OT-247ENST00000628347 SYS1-DBNDD2H3BUS1 97 aa6.88□□□□□ -1.31
SOX2-OT-247ENST00000628347 SLC25A34Q6PIV7 304 aa6.88□□□□□ -1.31
SOX2-OT-247ENST00000628347 DHRS4-AS1Q9P1J3 65 aa6.88□□□□□ -1.31
SOX2-OT-247ENST00000628347 LINC01545Q5VT33 79 aa6.87□□□□□ -1.31
SOX2-OT-247ENST00000628347 SPANXDQ9BXN6 97 aa6.87□□□□□ -1.31
SOX2-OT-247ENST00000628347 OR13C6PQ8NH95 151 aa6.86□□□□□ -1.31
SOX2-OT-247ENST00000628347 LIMD2Q9BT23 127 aa6.86□□□□□ -1.31
SOX2-OT-247ENST00000628347 ELOF1P60002 83 aaKnown RBP6.85□□□□□ -1.31
SOX2-OT-247ENST00000628347 PET117Q6UWS5 81 aa6.85□□□□□ -1.31
SOX2-OT-247ENST00000628347 LINC00518Q8N0U6 118 aa6.85□□□□□ -1.31
SOX2-OT-247ENST00000628347 ZNF815PA8K554 130 aa6.84□□□□□ -1.31
SOX2-OT-247ENST00000628347 HIST1H2BKO60814 126 aa6.84□□□□□ -1.31
SOX2-OT-247ENST00000628347 HIST1H2BJP06899 126 aa6.84□□□□□ -1.31
SOX2-OT-247ENST00000628347 HIST1H2BOP23527 126 aa6.84□□□□□ -1.31
SOX2-OT-247ENST00000628347 HIST1H2BBP33778 126 aa6.84□□□□□ -1.31
SOX2-OT-247ENST00000628347 HIST1H2BDP58876 126 aa6.84□□□□□ -1.31
SOX2-OT-247ENST00000628347 HIST1H2BCP62807 126 aa6.84□□□□□ -1.31
SOX2-OT-247ENST00000628347 HIST2H2BEQ16778 126 aa6.84□□□□□ -1.31
SOX2-OT-247ENST00000628347 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.84□□□□□ -1.31
SOX2-OT-247ENST00000628347 SLC7A5P1Q8MH63 180 aa6.84□□□□□ -1.31
SOX2-OT-247ENST00000628347 HIST1H2BHQ93079 126 aa6.84□□□□□ -1.31
SOX2-OT-247ENST00000628347 HIST1H2BNQ99877 126 aa6.84□□□□□ -1.31
SOX2-OT-247ENST00000628347 HIST1H2BMQ99879 126 aa6.84□□□□□ -1.31
SOX2-OT-247ENST00000628347 LAMTOR3Q9UHA4 124 aa6.84□□□□□ -1.31
SOX2-OT-247ENST00000628347 COX7BP24311 80 aa6.83□□□□□ -1.32
SOX2-OT-247ENST00000628347 CD164Q04900 197 aa6.82□□□□□ -1.32
SOX2-OT-247ENST00000628347 TRBV7-6A0A0J9YX20 115 aa6.81□□□□□ -1.32
SOX2-OT-247ENST00000628347 C6orf99Q4VX62 202 aa6.81□□□□□ -1.32
SOX2-OT-247ENST00000628347 HRCT1Q6UXD1 115 aa6.8□□□□□ -1.32
SOX2-OT-247ENST00000628347 TTTY13Q9BZ97 58 aa6.8□□□□□ -1.32
SOX2-OT-247ENST00000628347 TEX49A0A1B0GTD5 131 aa6.79□□□□□ -1.32
SOX2-OT-247ENST00000628347 C3orf79P0CE67 100 aa6.79□□□□□ -1.32
SOX2-OT-247ENST00000628347 Q5XG85 94 aa6.79□□□□□ -1.32
SOX2-OT-247ENST00000628347 PRO1933Q9H354 126 aa6.79□□□□□ -1.32
SOX2-OT-247ENST00000628347 TAL2Q16559 108 aa6.78□□□□□ -1.32
SOX2-OT-247ENST00000628347 KRTAP19-2Q3LHN2 52 aa6.78□□□□□ -1.32
SOX2-OT-247ENST00000628347 COPS9Q8WXC6 57 aa6.78□□□□□ -1.32
SOX2-OT-247ENST00000628347 A0A1B0GWB2 263 aa6.77□□□□□ -1.33
SOX2-OT-247ENST00000628347 IFITM1P13164 125 aa6.77□□□□□ -1.33
SOX2-OT-247ENST00000628347 COA6Q5JTJ3 125 aaKnown RBP6.77□□□□□ -1.33
SOX2-OT-247ENST00000628347 SMIM29Q86T20 159 aa6.77□□□□□ -1.33
SOX2-OT-247ENST00000628347 IGLV5-48A0A075B6I7 105 aa6.76□□□□□ -1.33
SOX2-OT-247ENST00000628347 Q1RN00 199 aa6.76□□□□□ -1.33
SOX2-OT-247ENST00000628347 PCOTHQ58A44 107 aa6.76□□□□□ -1.33
SOX2-OT-247ENST00000628347 Q6ZVH6 145 aa6.76□□□□□ -1.33
SOX2-OT-247ENST00000628347 DEFB105AQ8NG35 78 aa6.76□□□□□ -1.33
SOX2-OT-247ENST00000628347 C9orf92A6NGG3 77 aa6.75□□□□□ -1.33
SOX2-OT-247ENST00000628347 H7C2G1 150 aa6.75□□□□□ -1.33
SOX2-OT-247ENST00000628347 SCGB1D4Q6XE38 83 aa6.75□□□□□ -1.33
SOX2-OT-247ENST00000628347 AKR1D1P51857 326 aa6.74□□□□□ -1.33
SOX2-OT-247ENST00000628347 IGLV8-61A0A075B6I0 122 aa6.73□□□□□ -1.33
SOX2-OT-247ENST00000628347 C20orf202A1L168 122 aa6.73□□□□□ -1.33
SOX2-OT-247ENST00000628347 A4D1N5 150 aa6.73□□□□□ -1.33
SOX2-OT-247ENST00000628347 KRTDAPP60985 99 aa6.73□□□□□ -1.33
SOX2-OT-247ENST00000628347 ANKRD39Q53RE8 183 aa6.73□□□□□ -1.33
SOX2-OT-247ENST00000628347 C1orf195Q5TG92 126 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms