RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 RPL28P46779 137 aaKnown RBP0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 CKS1BP61024 79 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 HERVK_113P63121 156 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 UBE2BP63146 152 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 SEC11AP67812 179 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 HBBP68871 147 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 MRPS36P82909 103 aaKnown RBP0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 TPRXLQ17RH7 258 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 RGS21Q2M5E4 152 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 FAM229BQ4G0N7 80 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 Q5BKY6 102 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 C9orf116Q5BN46 136 aaPredicted RBP0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 CENPWQ5EE01 88 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 SPAG11AQ6PDA7 123 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 SFTA2Q6UW10 78 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 PHF5AQ7RTV0 110 aaKnown RBP0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 C5orf38Q86SI9 138 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 SLC51BQ86UW2 128 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 Q8IZM0 81 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 LINC00337Q8N6G1 96 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 NUP35Q8NFH5 326 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 RPL39LQ96EH5 51 aaKnown RBP0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 TMEM141Q96I45 108 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 SMIM7Q9BQ49 75 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 NAA38Q9BRA0 125 aaKnown RBP0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 C2orf88Q9BSF0 95 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 GNB1LQ9BYB4 327 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 EIF5A2Q9GZV4 153 aaKnown RBP0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 RNASE7Q9H1E1 156 aaKnown RBP0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 SMDT1Q9H4I9 107 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 OSTCQ9NRP0 149 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 SPANXA1Q9NS26 97 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 TMEM242Q9NWH2 141 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 GNG13Q9P2W3 67 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 TP73-AS1Q9UF72 201 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 NAT8BQ9UHF3 227 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 NDUFA12Q9UI09 145 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 UBE2D4Q9Y2X8 147 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 PKHD1L1Q86WI1 4243 aa0.44□□□□□ -2.34
PTP4A2-220ENST00000627328 DNAH8Q96JB1 4490 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 UBR4Q5T4S7 5183 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 LRP2P98164 4655 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 TINCRA0A1B0GVN0 87 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 SMIM27A0A1W2PRY6 76 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 LINC00587B1AMM8 73 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 D6R8Y8 96 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 F8VRH5 84 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 SMLR1H3BR10 107 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 H3BRM9 83 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 K7EN84 100 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 SPINK1P00995 79 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 CEBPGP53567 150 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 RAB5BP61020 215 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 RPS29P62273 56 aaKnown RBP0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 RPL39P62891 51 aaKnown RBP0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 S100A12P80511 92 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 SPAG11BQ08648 103 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 COX17Q14061 63 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 PEA15Q15121 130 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 ADIRFQ15847 76 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 MRPL51Q4U2R6 128 aaKnown RBP0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 C2orf82Q6UX34 121 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 ALKAL2Q6UX46 152 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 UNQ6190/PRO20217Q6UXQ8 127 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 FP248Q71RG6 208 aaPredicted RBP0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 ATP5L2Q7Z4Y8 100 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 FAM19A5Q7Z5A7 132 aaPredicted RBP0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 FAM19A3Q7Z5A8 133 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 TCTE3Q8IZS6 198 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 FAM19A2Q8N3H0 131 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 Q8N8P6 123 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 DAND5Q8N907 189 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 PRELID3AQ96N28 172 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 SCGB3A1Q96QR1 104 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 AMELXQ99217 191 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 RETNLBQ9BQ08 111 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 SMIM2Q9BVW6 85 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 MAP1LC3AQ9H492 121 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 GEMIN7Q9H840 131 aaKnown RBP0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 XAGE1AQ9HD64 81 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 NXT2Q9NPJ8 142 aaKnown RBP0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 TOMM7Q9P0U1 55 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 C6orf48Q9UBA6 75 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 NAT8Q9UHE5 227 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 CYSLTR1Q9Y271 337 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 LAMTOR2Q9Y2Q5 125 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 C22orf24Q9Y442 160 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 ZNF706Q9Y5V0 76 aaPredicted RBP0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 V9GYV3 84 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 TNXBP22105 4242 aa0.43□□□□□ -2.34
PTP4A2-220ENST00000627328 TRAV9-1A0A075B6T8 112 aa0.42□□□□□ -2.34
PTP4A2-220ENST00000627328 LOC389332A0A1B0GUA5 103 aa0.42□□□□□ -2.34
PTP4A2-220ENST00000627328 ETDCA0A1B0GVM5 59 aa0.42□□□□□ -2.34
PTP4A2-220ENST00000627328 A0A1B0GXF2 115 aa0.42□□□□□ -2.34
PTP4A2-220ENST00000627328 IGIPA6NJ69 53 aa0.42□□□□□ -2.34
PTP4A2-220ENST00000627328 M0R378 163 aa0.42□□□□□ -2.34
PTP4A2-220ENST00000627328 SLC25A20O43772 301 aa0.42□□□□□ -2.34
PTP4A2-220ENST00000627328 NPYP01303 97 aa0.42□□□□□ -2.34
PTP4A2-220ENST00000627328 MT-ND4LP03901 98 aa0.42□□□□□ -2.34
PTP4A2-220ENST00000627328 SRP19P09132 144 aaKnown RBP0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms