RNA–Protein interactions for RNA: ENST00000625463.1

CHD2-204, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-204ENST00000625463 LCE1DQ5T752 114 aa2.97□□□□□ -1.93
CHD2-204ENST00000625463 CRIPTQ9P021 101 aa2.95□□□□□ -1.94
CHD2-204ENST00000625463 WDR87Q6ZQQ6 2873 aa2.95□□□□□ -1.94
CHD2-204ENST00000625463 H0YAA0 97 aa2.94□□□□□ -1.94
CHD2-204ENST00000625463 H3BUX3 64 aa2.94□□□□□ -1.94
CHD2-204ENST00000625463 LCE5AQ5TCM9 118 aa2.94□□□□□ -1.94
CHD2-204ENST00000625463 DEFB103AP81534 67 aa2.93□□□□□ -1.94
CHD2-204ENST00000625463 TPRXLQ17RH7 258 aa2.93□□□□□ -1.94
CHD2-204ENST00000625463 COX6B2Q6YFQ2 88 aa2.93□□□□□ -1.94
CHD2-204ENST00000625463 NOP10Q9NPE3 64 aaKnown RBP2.93□□□□□ -1.94
CHD2-204ENST00000625463 PRO2289Q9P1D8 64 aa2.93□□□□□ -1.94
CHD2-204ENST00000625463 WNK2Q9Y3S1 2297 aa2.93□□□□□ -1.94
CHD2-204ENST00000625463 Q6ZSA8 131 aa2.92□□□□□ -1.94
CHD2-204ENST00000625463 AHCTF1Q8WYP5 2266 aa2.91□□□□□ -1.94
CHD2-204ENST00000625463 CUL9Q8IWT3 2517 aa2.91□□□□□ -1.94
CHD2-204ENST00000625463 KRTAP13-3Q3SY46 172 aa2.91□□□□□ -1.94
CHD2-204ENST00000625463 H1FX-AS1Q4G0G2 97 aa2.91□□□□□ -1.94
CHD2-204ENST00000625463 SPRR1BP22528 89 aa2.9□□□□□ -1.95
CHD2-204ENST00000625463 KRTAP24-1Q3LI83 254 aa2.9□□□□□ -1.95
CHD2-204ENST00000625463 SPTBN1Q01082 2364 aaKnown RBP2.9□□□□□ -1.95
CHD2-204ENST00000625463 BRD3OSQ6XYD6 125 aa2.88□□□□□ -1.95
CHD2-204ENST00000625463 PLAC4Q8WY50 150 aa2.88□□□□□ -1.95
CHD2-204ENST00000625463 PRO0255Q9UI72 69 aa2.88□□□□□ -1.95
CHD2-204ENST00000625463 IGKV2-30P06310 120 aa2.87□□□□□ -1.95
CHD2-204ENST00000625463 GIG44P09565 113 aaPredicted RBP2.87□□□□□ -1.95
CHD2-204ENST00000625463 DEFB119Q8N690 84 aa2.87□□□□□ -1.95
CHD2-204ENST00000625463 U3KQA8 63 aa2.87□□□□□ -1.95
CHD2-204ENST00000625463 IGKV2D-30A0A075B6S6 120 aa2.86□□□□□ -1.95
CHD2-204ENST00000625463 LY6EQ16553 131 aa2.86□□□□□ -1.95
CHD2-204ENST00000625463 KRTAP4-9Q9BYQ8 210 aa2.86□□□□□ -1.95
CHD2-204ENST00000625463 ANKRD17O75179 2603 aaKnown RBP2.86□□□□□ -1.95
CHD2-204ENST00000625463 WNK1Q9H4A3 2382 aa2.86□□□□□ -1.95
CHD2-204ENST00000625463 COL6A3P12111 3177 aa2.85□□□□□ -1.95
CHD2-204ENST00000625463 LYNX1P0DP58 116 aa2.85□□□□□ -1.95
CHD2-204ENST00000625463 RPL37P61927 97 aaKnown RBP2.85□□□□□ -1.95
CHD2-204ENST00000625463 DEFB136Q30KP8 78 aa2.85□□□□□ -1.95
CHD2-204ENST00000625463 LELP1Q5T871 98 aa2.85□□□□□ -1.95
CHD2-204ENST00000625463 KRTAP4-7Q9BYR0 210 aa2.85□□□□□ -1.95
CHD2-204ENST00000625463 DEFB130BP0DP73 79 aa2.84□□□□□ -1.95
CHD2-204ENST00000625463 DEFB130AP0DP74 79 aa2.84□□□□□ -1.95
CHD2-204ENST00000625463 MGAQ8IWI9 3026 aa2.84□□□□□ -1.96
CHD2-204ENST00000625463 CNOT1A5YKK6 2376 aaKnown RBP2.83□□□□□ -1.96
CHD2-204ENST00000625463 CACNA1GO43497 2377 aa2.83□□□□□ -1.96
CHD2-204ENST00000625463 TRIOBPQ9H2D6 2365 aa2.82□□□□□ -1.96
CHD2-204ENST00000625463 R4GN34 69 aa2.82□□□□□ -1.96
CHD2-204ENST00000625463 CEP350Q5VT06 3117 aa2.82□□□□□ -1.96
CHD2-204ENST00000625463 COL6A6A6NMZ7 2263 aa2.81□□□□□ -1.96
CHD2-204ENST00000625463 K7EIL1 84 aa2.81□□□□□ -1.96
CHD2-204ENST00000625463 PRLHP81277 87 aa2.81□□□□□ -1.96
CHD2-204ENST00000625463 C14orf177Q52M58 125 aa2.81□□□□□ -1.96
CHD2-204ENST00000625463 KRTAP4-11Q9BYQ6 195 aa2.8□□□□□ -1.96
CHD2-204ENST00000625463 CACNA1BQ00975 2339 aa2.79□□□□□ -1.96
CHD2-204ENST00000625463 INE1O15225 51 aa2.79□□□□□ -1.96
CHD2-204ENST00000625463 SPACA4Q8TDM5 124 aa2.79□□□□□ -1.96
CHD2-204ENST00000625463 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.79□□□□□ -1.963e-7■■■■■ 32.7
CHD2-204ENST00000625463 C10orf95Q9H7T3 257 aa2.78□□□□□ -1.96
CHD2-204ENST00000625463 A0A096LPF7 62 aa2.77□□□□□ -1.97
CHD2-204ENST00000625463 A0A1W2PPR1 153 aa2.76□□□□□ -1.97
CHD2-204ENST00000625463 SPINK1P00995 79 aa2.76□□□□□ -1.97
CHD2-204ENST00000625463 CACNA1EQ15878 2313 aa2.76□□□□□ -1.97
CHD2-204ENST00000625463 PCNTO95613 3336 aa2.75□□□□□ -1.97
CHD2-204ENST00000625463 Q6ZRN7 208 aaPredicted RBP2.75□□□□□ -1.97
CHD2-204ENST00000625463 UBE2DNLQ8IWF7 75 aa2.75□□□□□ -1.97
CHD2-204ENST00000625463 CHD7Q9P2D1 2997 aa2.74□□□□□ -1.97
CHD2-204ENST00000625463 C10orf99Q6UWK7 81 aa2.74□□□□□ -1.97
CHD2-204ENST00000625463 TYMSOSQ8TAI1 123 aa2.74□□□□□ -1.97
CHD2-204ENST00000625463 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
CHD2-204ENST00000625463 ZFHX2Q9C0A1 2572 aaPredicted RBP2.74□□□□□ -1.97
CHD2-204ENST00000625463 SPTBN2O15020 2390 aa2.74□□□□□ -1.97
CHD2-204ENST00000625463 SRCAPQ6ZRS2 3230 aa2.74□□□□□ -1.97
CHD2-204ENST00000625463 TPRP12270 2363 aaKnown RBP2.71□□□□□ -1.98
CHD2-204ENST00000625463 IGF2RP11717 2491 aa2.71□□□□□ -1.98
CHD2-204ENST00000625463 CEP250Q9BV73 2442 aa2.71□□□□□ -1.98
CHD2-204ENST00000625463 PKDREJQ9NTG1 2253 aa2.71□□□□□ -1.98
CHD2-204ENST00000625463 GOLGB1Q14789 3259 aaKnown RBP2.71□□□□□ -1.98
CHD2-204ENST00000625463 ZDBF2Q9HCK1 2354 aa2.71□□□□□ -1.98
CHD2-204ENST00000625463 DEFB123Q8N688 67 aa2.7□□□□□ -1.98
CHD2-204ENST00000625463 KRTAP4-5Q9BYR2 181 aa2.7□□□□□ -1.98
CHD2-204ENST00000625463 KRTAP7-1Q8IUC3 87 aa2.69□□□□□ -1.98
CHD2-204ENST00000625463 CENPFP49454 3210 aa2.69□□□□□ -1.98
CHD2-204ENST00000625463 AKAP6Q13023 2319 aa2.69□□□□□ -1.98
CHD2-204ENST00000625463 ACACAQ13085 2346 aa2.68□□□□□ -1.98
CHD2-204ENST00000625463 NOTCH3Q9UM47 2321 aa2.68□□□□□ -1.98
CHD2-204ENST00000625463 A0A096LNI7 61 aa2.68□□□□□ -1.98
CHD2-204ENST00000625463 UTRNP46939 3433 aa2.68□□□□□ -1.98
CHD2-204ENST00000625463 ZZEF1O43149 2961 aa2.67□□□□□ -1.98
CHD2-204ENST00000625463 H3BNG1 76 aa2.67□□□□□ -1.98
CHD2-204ENST00000625463 PCNX1Q96RV3 2341 aa2.67□□□□□ -1.98
CHD2-204ENST00000625463 SPTBN5Q9NRC6 3674 aaKnown RBP2.66□□□□□ -1.98
CHD2-204ENST00000625463 FLG2Q5D862 2391 aaPredicted RBP2.66□□□□□ -1.98
CHD2-204ENST00000625463 TENM2Q9NT68 2774 aa2.66□□□□□ -1.98
CHD2-204ENST00000625463 APLNQ9ULZ1 77 aa2.66□□□□□ -1.98
CHD2-204ENST00000625463 S4R3F8 94 aa2.66□□□□□ -1.98
CHD2-204ENST00000625463 APC2O95996 2303 aa2.66□□□□□ -1.98
CHD2-204ENST00000625463 FAM186AA6NE01 2351 aa2.65□□□□□ -1.98
CHD2-204ENST00000625463 SPART-AS1P0CW21 52 aa2.65□□□□□ -1.99
CHD2-204ENST00000625463 KRTAP12-2P59991 146 aa2.65□□□□□ -1.99
CHD2-204ENST00000625463 LINC01556Q5JQF7 62 aa2.65□□□□□ -1.99
CHD2-204ENST00000625463 GPR179Q6PRD1 2367 aa2.64□□□□□ -1.99
CHD2-204ENST00000625463 SPINK6Q6UWN8 80 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms