RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 F8WDY8 70 aa3.85□□□□□ -1.79
ERCC6-213ENST00000624341 ELOF1P60002 83 aaKnown RBP3.85□□□□□ -1.79
ERCC6-213ENST00000624341 LOC110117498A0A087WWA1 95 aa3.84□□□□□ -1.79
ERCC6-213ENST00000624341 MDFIQ99750 246 aa3.84□□□□□ -1.79
ERCC6-213ENST00000624341 ITPR1Q14643 2758 aa3.84□□□□□ -1.79
ERCC6-213ENST00000624341 KALRNO60229 2985 aa3.84□□□□□ -1.8
ERCC6-213ENST00000624341 ACYP2P14621 99 aa3.83□□□□□ -1.8
ERCC6-213ENST00000624341 CENPEQ02224 2701 aa3.83□□□□□ -1.8
ERCC6-213ENST00000624341 ST20-AS1Q8NBB2 130 aa3.83□□□□□ -1.8
ERCC6-213ENST00000624341 Q8NBF4 154 aa3.83□□□□□ -1.8
ERCC6-213ENST00000624341 MGAM2Q2M2H8 2515 aa3.82□□□□□ -1.8
ERCC6-213ENST00000624341 KLK9Q2XQG4 91 aa3.82□□□□□ -1.8
ERCC6-213ENST00000624341 SPAG11AQ6PDA7 123 aa3.82□□□□□ -1.8
ERCC6-213ENST00000624341 LINC00476Q8WZB0 136 aa3.82□□□□□ -1.8
ERCC6-213ENST00000624341 DMXL2Q8TDJ6 3036 aa3.81□□□□□ -1.8
ERCC6-213ENST00000624341 C16orf90A8MZG2 172 aa3.81□□□□□ -1.8
ERCC6-213ENST00000624341 Q6ZRX8 168 aa3.81□□□□□ -1.8
ERCC6-213ENST00000624341 RPL37AP61513 92 aaKnown RBP3.81□□□□□ -1.8
ERCC6-213ENST00000624341 UBR5O95071 2799 aaPredicted RBP3.81□□□□□ -1.8
ERCC6-213ENST00000624341 ZFHX3Q15911 3703 aa3.8□□□□□ -1.8
ERCC6-213ENST00000624341 GCN1Q92616 2671 aaKnown RBP3.8□□□□□ -1.8
ERCC6-213ENST00000624341 ATRQ13535 2644 aa3.8□□□□□ -1.8
ERCC6-213ENST00000624341 IGKV2D-30A0A075B6S6 120 aa3.8□□□□□ -1.8
ERCC6-213ENST00000624341 IGKV2-30P06310 120 aa3.8□□□□□ -1.8
ERCC6-213ENST00000624341 SERTAD4-AS1Q5TG53 156 aa3.8□□□□□ -1.8
ERCC6-213ENST00000624341 IGLV6-57P01721 117 aa3.8□□□□□ -1.8
ERCC6-213ENST00000624341 TRBV7-4A0A0J9YYF1 115 aa3.79□□□□□ -1.8
ERCC6-213ENST00000624341 C9orf129Q5T035 196 aaKnown RBP3.79□□□□□ -1.8
ERCC6-213ENST00000624341 BSNQ9UPA5 3926 aa3.79□□□□□ -1.8
ERCC6-213ENST00000624341 Q6ZRP5 223 aa3.79□□□□□ -1.8
ERCC6-213ENST00000624341 A0A1B0GW54 56 aa3.79□□□□□ -1.8
ERCC6-213ENST00000624341 VPREB1P12018 145 aa3.79□□□□□ -1.8
ERCC6-213ENST00000624341 MOBPQ13875 183 aa3.79□□□□□ -1.8
ERCC6-213ENST00000624341 A0A1B0GU69 56 aa3.78□□□□□ -1.8
ERCC6-213ENST00000624341 A8MUN3 132 aa3.78□□□□□ -1.8
ERCC6-213ENST00000624341 K7EQZ3 153 aa3.78□□□□□ -1.8
ERCC6-213ENST00000624341 ASH1LQ9NR48 2969 aaKnown RBP3.78□□□□□ -1.8
ERCC6-213ENST00000624341 TRAV22A0A0B4J277 110 aa3.78□□□□□ -1.8
ERCC6-213ENST00000624341 PHF5AQ7RTV0 110 aaKnown RBP3.78□□□□□ -1.8
ERCC6-213ENST00000624341 LINC00336Q6ZUF6 198 aa3.78□□□□□ -1.8
ERCC6-213ENST00000624341 TP53AIP1Q9HCN2 124 aa3.78□□□□□ -1.8
ERCC6-213ENST00000624341 DSPP15924 2871 aaKnown RBP3.78□□□□□ -1.81
ERCC6-213ENST00000624341 ATP11AUNQ6ZP68 121 aa3.78□□□□□ -1.81
ERCC6-213ENST00000624341 Q8NAQ8 132 aa3.77□□□□□ -1.81
ERCC6-213ENST00000624341 MAST4O15021 2626 aa3.77□□□□□ -1.81
ERCC6-213ENST00000624341 ADGRG4Q8IZF6 3080 aa3.77□□□□□ -1.81
ERCC6-213ENST00000624341 FAM168BA1KXE4 195 aa3.77□□□□□ -1.81
ERCC6-213ENST00000624341 HECTD1Q9ULT8 2610 aa3.77□□□□□ -1.81
ERCC6-213ENST00000624341 GVQW2A0A096LPI5 108 aaPredicted RBP3.77□□□□□ -1.81
ERCC6-213ENST00000624341 EPM2AB3EWF7 344 aa3.77□□□□□ -1.81
ERCC6-213ENST00000624341 KLKP1Q107X0 134 aa3.77□□□□□ -1.81
ERCC6-213ENST00000624341 H7BZZ5 65 aa3.76□□□□□ -1.81
ERCC6-213ENST00000624341 ZZEF1O43149 2961 aa3.76□□□□□ -1.81
ERCC6-213ENST00000624341 TENM4Q6N022 2769 aa3.76□□□□□ -1.81
ERCC6-213ENST00000624341 DCHS2Q6V1P9 2916 aa3.76□□□□□ -1.81
ERCC6-213ENST00000624341 H3BNG1 76 aa3.76□□□□□ -1.81
ERCC6-213ENST00000624341 H3BPC8 53 aa3.76□□□□□ -1.81
ERCC6-213ENST00000624341 CHTF8P0CG12 524 aa3.76□□□□□ -1.81
ERCC6-213ENST00000624341 LINC00528Q8N1L1 170 aa3.76□□□□□ -1.81
ERCC6-213ENST00000624341 WWC2-AS2Q96NR7 200 aa3.76□□□□□ -1.81
ERCC6-213ENST00000624341 CSNK1G2-AS1Q8NCQ2 148 aa3.75□□□□□ -1.81
ERCC6-213ENST00000624341 C7orf65Q6ZTY9 151 aa3.75□□□□□ -1.81
ERCC6-213ENST00000624341 SPACA4Q8TDM5 124 aa3.75□□□□□ -1.81
ERCC6-213ENST00000624341 IGLV8-61A0A075B6I0 122 aa3.75□□□□□ -1.81
ERCC6-213ENST00000624341 ERC2-IT1O76042 136 aa3.75□□□□□ -1.81
ERCC6-213ENST00000624341 ZNF575Q86XF7 245 aa3.75□□□□□ -1.81
ERCC6-213ENST00000624341 HELZ2Q9BYK8 2649 aaKnown RBP3.75□□□□□ -1.81
ERCC6-213ENST00000624341 A0A0G2JQZ4 141 aa3.74□□□□□ -1.81
ERCC6-213ENST00000624341 A0A1W2PNN7 141 aa3.74□□□□□ -1.81
ERCC6-213ENST00000624341 LINC00588Q9Y4M8 146 aa3.74□□□□□ -1.81
ERCC6-213ENST00000624341 GIG44P09565 113 aaPredicted RBP3.74□□□□□ -1.81
ERCC6-213ENST00000624341 KRTAP1-3Q8IUG1 177 aa3.73□□□□□ -1.81
ERCC6-213ENST00000624341 KCNQ1DNQ9H478 68 aa3.73□□□□□ -1.81
ERCC6-213ENST00000624341 Q8N377 158 aa3.73□□□□□ -1.81
ERCC6-213ENST00000624341 COA5Q86WW8 74 aa3.73□□□□□ -1.81
ERCC6-213ENST00000624341 MAP1AP78559 2803 aaPredicted RBP3.72□□□□□ -1.81
ERCC6-213ENST00000624341 A8MWP4 228 aa3.72□□□□□ -1.81
ERCC6-213ENST00000624341 ATMQ13315 3056 aa3.72□□□□□ -1.81
ERCC6-213ENST00000624341 IGLV1-50A0A075B6I6 118 aa3.72□□□□□ -1.81
ERCC6-213ENST00000624341 TYMSOSQ8TAI1 123 aa3.72□□□□□ -1.81
ERCC6-213ENST00000624341 IGFL1Q6UW32 110 aa3.72□□□□□ -1.81
ERCC6-213ENST00000624341 PRR34Q9NV39 138 aa3.71□□□□□ -1.81
ERCC6-213ENST00000624341 LAMA5O15230 3695 aa3.71□□□□□ -1.82
ERCC6-213ENST00000624341 FLNAP21333 2647 aaKnown RBP3.71□□□□□ -1.82
ERCC6-213ENST00000624341 LINC00313P59037 77 aa3.7□□□□□ -1.82
ERCC6-213ENST00000624341 C15orf56Q8N910 161 aa3.7□□□□□ -1.82
ERCC6-213ENST00000624341 C19orf73Q9NVV2 129 aa3.7□□□□□ -1.82
ERCC6-213ENST00000624341 MGAQ8IWI9 3026 aa3.7□□□□□ -1.82
ERCC6-213ENST00000624341 C8orf87E5RJ46 101 aa3.7□□□□□ -1.82
ERCC6-213ENST00000624341 DNAH10OSP0CZ25 163 aa3.7□□□□□ -1.82
ERCC6-213ENST00000624341 M0R2T5 61 aa3.7□□□□□ -1.82
ERCC6-213ENST00000624341 CFAP46Q8IYW2 2715 aa3.7□□□□□ -1.82
ERCC6-213ENST00000624341 PRR15Q8IV56 129 aa3.69□□□□□ -1.82
ERCC6-213ENST00000624341 MRPL34Q9BQ48 92 aaKnown RBP3.69□□□□□ -1.82
ERCC6-213ENST00000624341 CYP4F30PQ9H0H9 118 aa3.69□□□□□ -1.82
ERCC6-213ENST00000624341 LOC101927531A0A1B0GV80 90 aa3.69□□□□□ -1.82
ERCC6-213ENST00000624341 OBSCN-AS1Q96MR7 158 aa3.69□□□□□ -1.82
ERCC6-213ENST00000624341 NBEAL1Q6ZS30 2694 aa3.69□□□□□ -1.82
ERCC6-213ENST00000624341 KRTAP24-1Q3LI83 254 aa3.68□□□□□ -1.82
ERCC6-213ENST00000624341 ITPR3Q14573 2671 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms