RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 FUSP35637 526 aaKnown RBP eCLIP9.34□□□□□ -0.91
LDB3-209ENST00000623056 MPLKIPQ8TAP9 179 aa9.34□□□□□ -0.91
LDB3-209ENST00000623056 HIGD2BQ4VC39 106 aa9.33□□□□□ -0.92
LDB3-209ENST00000623056 HIVEP1P15822 2718 aa9.33□□□□□ -0.92
LDB3-209ENST00000623056 C3orf84H3BNL1 204 aa9.33□□□□□ -0.92
LDB3-209ENST00000623056 F8P00451 2351 aa9.33□□□□□ -0.92
LDB3-209ENST00000623056 NSD1Q96L73 2696 aaPredicted RBP9.33□□□□□ -0.92
LDB3-209ENST00000623056 Q6ZTC4 211 aa9.32□□□□□ -0.92
LDB3-209ENST00000623056 CAMK2N2Q96S95 79 aa9.32□□□□□ -0.92
LDB3-209ENST00000623056 HIGD2AQ9BW72 106 aa9.32□□□□□ -0.92
LDB3-209ENST00000623056 ESRGQ1W209 222 aa9.31□□□□□ -0.92
LDB3-209ENST00000623056 KRTAP10-3P60369 221 aa9.3□□□□□ -0.92
LDB3-209ENST00000623056 EGFEM1PQ0D2K5 195 aa9.3□□□□□ -0.92
LDB3-209ENST00000623056 Q6ZRU5 148 aa9.3□□□□□ -0.92
LDB3-209ENST00000623056 Q8NAQ8 132 aa9.29□□□□□ -0.92
LDB3-209ENST00000623056 DEFB105AQ8NG35 78 aa9.27□□□□□ -0.93
LDB3-209ENST00000623056 SMIM29Q86T20 159 aa9.26□□□□□ -0.93
LDB3-209ENST00000623056 SPART-AS1P0CW21 52 aa9.26□□□□□ -0.93
LDB3-209ENST00000623056 APOC4P55056 127 aa9.26□□□□□ -0.93
LDB3-209ENST00000623056 FAM30AQ9NZY2 134 aa9.26□□□□□ -0.93
LDB3-209ENST00000623056 Q8N377 158 aa9.25□□□□□ -0.93
LDB3-209ENST00000623056 VWFP04275 2813 aa9.25□□□□□ -0.93
LDB3-209ENST00000623056 KRTAP26-1Q6PEX3 210 aa9.25□□□□□ -0.93
LDB3-209ENST00000623056 C15orf56Q8N910 161 aa9.25□□□□□ -0.93
LDB3-209ENST00000623056 IGLV5-48A0A075B6I7 105 aa9.24□□□□□ -0.93
LDB3-209ENST00000623056 KPRPQ5T749 579 aaPredicted RBP9.24□□□□□ -0.93
LDB3-209ENST00000623056 TENM1Q9UKZ4 2725 aa9.24□□□□□ -0.93
LDB3-209ENST00000623056 Q6ZRP5 223 aa9.23□□□□□ -0.93
LDB3-209ENST00000623056 WFDC10BQ8IUB3 73 aa9.23□□□□□ -0.93
LDB3-209ENST00000623056 KCNQ1DNQ9H478 68 aa9.22□□□□□ -0.93
LDB3-209ENST00000623056 LCE6AA0A183 80 aa9.21□□□□□ -0.93
LDB3-209ENST00000623056 C1orf195Q5TG92 126 aa9.21□□□□□ -0.93
LDB3-209ENST00000623056 hDV103S1A0JD37 113 aa9.21□□□□□ -0.94
LDB3-209ENST00000623056 A0A1W2PNM2 257 aa9.2□□□□□ -0.94
LDB3-209ENST00000623056 KRTAP21-3Q3LHN1 58 aa9.2□□□□□ -0.94
LDB3-209ENST00000623056 NKAPP1Q8N9T2 125 aa9.19□□□□□ -0.94
LDB3-209ENST00000623056 C7orf33Q8WU49 177 aa9.18□□□□□ -0.94
LDB3-209ENST00000623056 A0A1B0GW54 56 aa9.17□□□□□ -0.94
LDB3-209ENST00000623056 SERTAD4-AS1Q5TG53 156 aa9.17□□□□□ -0.94
LDB3-209ENST00000623056 ATRQ13535 2644 aa9.17□□□□□ -0.94
LDB3-209ENST00000623056 LRCOL1A6NCL2 159 aa9.16□□□□□ -0.94
LDB3-209ENST00000623056 F8WDY8 70 aa9.16□□□□□ -0.94
LDB3-209ENST00000623056 C1orf137Q5JT78 98 aa9.16□□□□□ -0.94
LDB3-209ENST00000623056 C1orf64Q8NEQ6 169 aa9.16□□□□□ -0.94
LDB3-209ENST00000623056 ZCCHC13Q8WW36 166 aaKnown RBP9.16□□□□□ -0.94
LDB3-209ENST00000623056 TRRAPQ9Y4A5 3859 aa9.15□□□□□ -0.94
LDB3-209ENST00000623056 TNP2Q05952 138 aa9.15□□□□□ -0.95
LDB3-209ENST00000623056 Q8NBF4 154 aa9.15□□□□□ -0.95
LDB3-209ENST00000623056 DHRS4-AS1Q9P1J3 65 aa9.15□□□□□ -0.95
LDB3-209ENST00000623056 DSCR10P59022 87 aa9.14□□□□□ -0.95
LDB3-209ENST00000623056 SYCNQ0VAF6 134 aa9.14□□□□□ -0.95
LDB3-209ENST00000623056 Q9BRP9 147 aa9.14□□□□□ -0.95
LDB3-209ENST00000623056 ETDCA0A1B0GVM5 59 aa9.14□□□□□ -0.95
LDB3-209ENST00000623056 Q6ZRX8 168 aa9.14□□□□□ -0.95
LDB3-209ENST00000623056 Q1T7F1 81 aa9.13□□□□□ -0.95
LDB3-209ENST00000623056 V9GYY9 64 aa9.13□□□□□ -0.95
LDB3-209ENST00000623056 ST20-AS1Q8NBB2 130 aa9.13□□□□□ -0.95
LDB3-209ENST00000623056 RPL37AP8A6NKH3 93 aa9.12□□□□□ -0.95
LDB3-209ENST00000623056 K7EQZ3 153 aa9.12□□□□□ -0.95
LDB3-209ENST00000623056 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.11□□□□□ -0.95
LDB3-209ENST00000623056 SPRR4Q96PI1 79 aa9.11□□□□□ -0.95
LDB3-209ENST00000623056 KRTAP4-16G5E9R7 235 aaPredicted RBP9.11□□□□□ -0.95
LDB3-209ENST00000623056 IGKV2D-24A0A075B6R9 120 aa9.1□□□□□ -0.95
LDB3-209ENST00000623056 PRR15Q8IV56 129 aa9.09□□□□□ -0.95
LDB3-209ENST00000623056 H3BNG1 76 aa9.08□□□□□ -0.96
LDB3-209ENST00000623056 IGLV1-50A0A075B6I6 118 aa9.07□□□□□ -0.96
LDB3-209ENST00000623056 FAM168BA1KXE4 195 aa9.07□□□□□ -0.96
LDB3-209ENST00000623056 HCG22E2RYF7 251 aa9.06□□□□□ -0.96
LDB3-209ENST00000623056 SPRR1AP35321 89 aa9.06□□□□□ -0.96
LDB3-209ENST00000623056 PRR4Q16378 134 aa9.06□□□□□ -0.96
LDB3-209ENST00000623056 CYP4F30PQ9H0H9 118 aa9.06□□□□□ -0.96
LDB3-209ENST00000623056 PLA2G2DQ9UNK4 145 aa9.06□□□□□ -0.96
LDB3-209ENST00000623056 PSPHP1O15172 72 aa9.05□□□□□ -0.96
LDB3-209ENST00000623056 TRAV22A0A0B4J277 110 aa9.04□□□□□ -0.96
LDB3-209ENST00000623056 TLX1NBP0CAT3 122 aa9.04□□□□□ -0.96
LDB3-209ENST00000623056 LINC01556Q5JQF7 62 aa9.04□□□□□ -0.96
LDB3-209ENST00000623056 FBN1P35555 2871 aaKnown RBP9.03□□□□□ -0.96
LDB3-209ENST00000623056 PKD1L1Q8TDX9 2849 aa9.03□□□□□ -0.96
LDB3-209ENST00000623056 SEC61GP60059 68 aa9.03□□□□□ -0.96
LDB3-209ENST00000623056 IGLV5-37A0A075B6J1 123 aa9.03□□□□□ -0.96
LDB3-209ENST00000623056 PSCAO43653 123 aa9.03□□□□□ -0.96
LDB3-209ENST00000623056 RETNQ9HD89 108 aa9.03□□□□□ -0.96
LDB3-209ENST00000623056 KRTAP7-1Q8IUC3 87 aa9.02□□□□□ -0.97
LDB3-209ENST00000623056 UBE2BP63146 152 aa9□□□□□ -0.97
LDB3-209ENST00000623056 KRTAP24-1Q3LI83 254 aa9□□□□□ -0.97
LDB3-209ENST00000623056 LINC00476Q8WZB0 136 aa9□□□□□ -0.97
LDB3-209ENST00000623056 A0A0G2JQZ4 141 aa9□□□□□ -0.97
LDB3-209ENST00000623056 A0A1W2PNN7 141 aa9□□□□□ -0.97
LDB3-209ENST00000623056 NDUFB1O75438 58 aa8.99□□□□□ -0.97
LDB3-209ENST00000623056 PRB2P02812 416 aaPredicted RBP8.99□□□□□ -0.97
LDB3-209ENST00000623056 DEFB116Q30KQ4 102 aa8.99□□□□□ -0.97
LDB3-209ENST00000623056 WFDC13Q8IUB5 93 aa8.99□□□□□ -0.97
LDB3-209ENST00000623056 STAB1Q9NY15 2570 aa8.98□□□□□ -0.97
LDB3-209ENST00000623056 PMAIP1Q13794 54 aa8.97□□□□□ -0.97
LDB3-209ENST00000623056 MRPL55Q7Z7F7 128 aaKnown RBP8.97□□□□□ -0.97
LDB3-209ENST00000623056 A8MUN3 132 aa8.97□□□□□ -0.97
LDB3-209ENST00000623056 MP68P56378 58 aa8.97□□□□□ -0.97
LDB3-209ENST00000623056 IGFL1Q6UW32 110 aa8.96□□□□□ -0.97
LDB3-209ENST00000623056 OXLD1Q5BKU9 147 aa8.95□□□□□ -0.98
LDB3-209ENST00000623056 CASC10Q5T4H9 136 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms