RNA–Protein interactions for RNA: ENST00000622656.1

PCDHGC3-207, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-207ENST00000622656 LINC00483Q53H64 154 aa5.78□□□□□ -1.48
PCDHGC3-207ENST00000622656 GAGE2AQ6NT46 116 aa5.78□□□□□ -1.48
PCDHGC3-207ENST00000622656 LITAFQ99732 161 aa5.78□□□□□ -1.48
PCDHGC3-207ENST00000622656 SPANXB1Q9NS25 103 aaPredicted RBP5.78□□□□□ -1.48
PCDHGC3-207ENST00000622656 ZNF706Q9Y5V0 76 aaPredicted RBP5.78□□□□□ -1.48
PCDHGC3-207ENST00000622656 NDUFC2O95298 119 aa5.77□□□□□ -1.49
PCDHGC3-207ENST00000622656 TPRXLQ17RH7 258 aa5.76□□□□□ -1.49
PCDHGC3-207ENST00000622656 LINC01545Q5VT33 79 aa5.76□□□□□ -1.49
PCDHGC3-207ENST00000622656 Q6ZRX8 168 aa5.76□□□□□ -1.49
PCDHGC3-207ENST00000622656 MIEN1Q9BRT3 115 aa5.76□□□□□ -1.49
PCDHGC3-207ENST00000622656 IGLV9-49A0A0B4J1Y8 123 aa5.75□□□□□ -1.49
PCDHGC3-207ENST00000622656 C3orf79P0CE67 100 aa5.75□□□□□ -1.49
PCDHGC3-207ENST00000622656 MOBPQ13875 183 aa5.75□□□□□ -1.49
PCDHGC3-207ENST00000622656 S100A7L2Q5SY68 101 aa5.75□□□□□ -1.49
PCDHGC3-207ENST00000622656 ST20-AS1Q8NBB2 130 aa5.75□□□□□ -1.49
PCDHGC3-207ENST00000622656 TRAV23DV6A0A075B6W5 121 aa5.74□□□□□ -1.49
PCDHGC3-207ENST00000622656 CTAG1AP78358 180 aa5.74□□□□□ -1.49
PCDHGC3-207ENST00000622656 SPAG11AQ6PDA7 123 aa5.74□□□□□ -1.49
PCDHGC3-207ENST00000622656 LINC00308Q8TCZ7 52 aa5.74□□□□□ -1.49
PCDHGC3-207ENST00000622656 CDIP1Q9H305 208 aa5.74□□□□□ -1.49
PCDHGC3-207ENST00000622656 ZNF73O43830 326 aaPredicted RBP5.73□□□□□ -1.49
PCDHGC3-207ENST00000622656 PET117Q6UWS5 81 aa5.73□□□□□ -1.49
PCDHGC3-207ENST00000622656 ZNF815PA8K554 130 aa5.72□□□□□ -1.49
PCDHGC3-207ENST00000622656 S100A12P80511 92 aa5.72□□□□□ -1.49
PCDHGC3-207ENST00000622656 C4orf48Q5BLP8 95 aa5.72□□□□□ -1.49
PCDHGC3-207ENST00000622656 S100A1P23297 94 aa5.71□□□□□ -1.5
PCDHGC3-207ENST00000622656 KRTDAPP60985 99 aa5.71□□□□□ -1.5
PCDHGC3-207ENST00000622656 KRTAP13-3Q3SY46 172 aa5.71□□□□□ -1.5
PCDHGC3-207ENST00000622656 ANKRD39Q53RE8 183 aa5.71□□□□□ -1.5
PCDHGC3-207ENST00000622656 COA6Q5JTJ3 125 aaKnown RBP5.71□□□□□ -1.5
PCDHGC3-207ENST00000622656 TIMM17BO60830 172 aa5.7□□□□□ -1.5
PCDHGC3-207ENST00000622656 SPINK1P00995 79 aa5.7□□□□□ -1.5
PCDHGC3-207ENST00000622656 LCE2AQ5TA79 106 aaPredicted RBP5.7□□□□□ -1.5
PCDHGC3-207ENST00000622656 Q8N377 158 aa5.7□□□□□ -1.5
PCDHGC3-207ENST00000622656 OR13C6PQ8NH95 151 aa5.7□□□□□ -1.5
PCDHGC3-207ENST00000622656 SPANXCQ9NY87 97 aa5.7□□□□□ -1.5
PCDHGC3-207ENST00000622656 FP248Q71RG6 208 aaPredicted RBP5.69□□□□□ -1.5
PCDHGC3-207ENST00000622656 SSBP3-AS1Q7Z2R9 100 aa5.69□□□□□ -1.5
PCDHGC3-207ENST00000622656 ATOH7Q8N100 152 aa5.69□□□□□ -1.5
PCDHGC3-207ENST00000622656 KRTAP4-1Q9BYQ7 146 aa5.68□□□□□ -1.5
PCDHGC3-207ENST00000622656 JOSD1Q15040 202 aaPredicted RBP5.67□□□□□ -1.5
PCDHGC3-207ENST00000622656 C9orf153Q5TBE3 101 aa5.67□□□□□ -1.5
PCDHGC3-207ENST00000622656 C6orf99Q4VX62 202 aa5.66□□□□□ -1.5
PCDHGC3-207ENST00000622656 PCP2Q8IVA1 136 aa5.66□□□□□ -1.5
PCDHGC3-207ENST00000622656 SPANXDQ9BXN6 97 aa5.66□□□□□ -1.5
PCDHGC3-207ENST00000622656 SPRR1BP22528 89 aa5.65□□□□□ -1.5
PCDHGC3-207ENST00000622656 RPS29P62273 56 aaKnown RBP5.65□□□□□ -1.5
PCDHGC3-207ENST00000622656 A0A0U1RQV1 116 aa5.64□□□□□ -1.51
PCDHGC3-207ENST00000622656 ELOF1P60002 83 aaKnown RBP5.64□□□□□ -1.51
PCDHGC3-207ENST00000622656 HRCT1Q6UXD1 115 aa5.64□□□□□ -1.51
PCDHGC3-207ENST00000622656 COX7BP24311 80 aa5.63□□□□□ -1.51
PCDHGC3-207ENST00000622656 HINT1P49773 126 aaPredicted RBP5.63□□□□□ -1.51
PCDHGC3-207ENST00000622656 SCGB1D4Q6XE38 83 aa5.63□□□□□ -1.51
PCDHGC3-207ENST00000622656 MUSTN1Q8IVN3 82 aa5.63□□□□□ -1.51
PCDHGC3-207ENST00000622656 A0A0G2JQZ4 141 aa5.62□□□□□ -1.51
PCDHGC3-207ENST00000622656 C5orf52A6NGY3 159 aa5.62□□□□□ -1.51
PCDHGC3-207ENST00000622656 SLC25A20O43772 301 aa5.62□□□□□ -1.51
PCDHGC3-207ENST00000622656 LINC01547P58512 204 aaPredicted RBP5.62□□□□□ -1.51
PCDHGC3-207ENST00000622656 Q1RN00 199 aa5.62□□□□□ -1.51
PCDHGC3-207ENST00000622656 ASB16-AS1Q495Z4 193 aa5.62□□□□□ -1.51
PCDHGC3-207ENST00000622656 DEFB105AQ8NG35 78 aa5.62□□□□□ -1.51
PCDHGC3-207ENST00000622656 DHRS4-AS1Q9P1J3 65 aa5.62□□□□□ -1.51
PCDHGC3-207ENST00000622656 C20orf202A1L168 122 aa5.61□□□□□ -1.51
PCDHGC3-207ENST00000622656 SMIM29Q86T20 159 aa5.61□□□□□ -1.51
PCDHGC3-207ENST00000622656 LINC00518Q8N0U6 118 aa5.61□□□□□ -1.51
PCDHGC3-207ENST00000622656 CBY1Q9Y3M2 126 aa5.61□□□□□ -1.51
PCDHGC3-207ENST00000622656 XP32Q5T750 250 aa5.6□□□□□ -1.51
PCDHGC3-207ENST00000622656 HIST3H2BBQ8N257 126 aa5.6□□□□□ -1.51
PCDHGC3-207ENST00000622656 A6NDN8 102 aa5.59□□□□□ -1.51
PCDHGC3-207ENST00000622656 IFITM1P13164 125 aa5.59□□□□□ -1.51
PCDHGC3-207ENST00000622656 TAL2Q16559 108 aa5.59□□□□□ -1.51
PCDHGC3-207ENST00000622656 HIST1H2BLQ99880 126 aa5.59□□□□□ -1.51
PCDHGC3-207ENST00000622656 SMIM11BQ8TCY0 68 aa5.58□□□□□ -1.52
PCDHGC3-207ENST00000622656 LAMTOR3Q9UHA4 124 aa5.58□□□□□ -1.52
PCDHGC3-207ENST00000622656 FSIP2Q5CZC0 6907 aa5.57□□□□□ -1.52
PCDHGC3-207ENST00000622656 TRBV7-6A0A0J9YX20 115 aa5.57□□□□□ -1.52
PCDHGC3-207ENST00000622656 H7C2G1 150 aa5.57□□□□□ -1.52
PCDHGC3-207ENST00000622656 IGLV5-48A0A075B6I7 105 aa5.56□□□□□ -1.52
PCDHGC3-207ENST00000622656 TEX49A0A1B0GTD5 131 aa5.56□□□□□ -1.52
PCDHGC3-207ENST00000622656 A0A1B0GWB2 263 aa5.56□□□□□ -1.52
PCDHGC3-207ENST00000622656 Q6ZVH6 145 aa5.56□□□□□ -1.52
PCDHGC3-207ENST00000622656 C9orf92A6NGG3 77 aa5.55□□□□□ -1.52
PCDHGC3-207ENST00000622656 SEC61BP60468 96 aaKnown RBP5.55□□□□□ -1.52
PCDHGC3-207ENST00000622656 SLC25A34Q6PIV7 304 aa5.55□□□□□ -1.52
PCDHGC3-207ENST00000622656 PRO1933Q9H354 126 aa5.54□□□□□ -1.52
PCDHGC3-207ENST00000622656 TRAV13-2A0A0B4J235 113 aa5.53□□□□□ -1.52
PCDHGC3-207ENST00000622656 A4D1N5 150 aa5.53□□□□□ -1.52
PCDHGC3-207ENST00000622656 COPS9Q8WXC6 57 aa5.53□□□□□ -1.52
PCDHGC3-207ENST00000622656 LIMD2Q9BT23 127 aa5.53□□□□□ -1.52
PCDHGC3-207ENST00000622656 CRCT1Q9UGL9 99 aa5.53□□□□□ -1.52
PCDHGC3-207ENST00000622656 S100A2P29034 98 aa5.52□□□□□ -1.53
PCDHGC3-207ENST00000622656 AKR1D1P51857 326 aa5.52□□□□□ -1.53
PCDHGC3-207ENST00000622656 SNRPEP62304 92 aaKnown RBP5.52□□□□□ -1.53
PCDHGC3-207ENST00000622656 CD164Q04900 197 aa5.52□□□□□ -1.53
PCDHGC3-207ENST00000622656 LCE2CQ5TA81 110 aa5.52□□□□□ -1.53
PCDHGC3-207ENST00000622656 C1orf195Q5TG92 126 aa5.52□□□□□ -1.53
PCDHGC3-207ENST00000622656 KRTAP19-2Q3LHN2 52 aa5.51□□□□□ -1.53
PCDHGC3-207ENST00000622656 C12orf57Q99622 126 aa5.51□□□□□ -1.53
PCDHGC3-207ENST00000622656 PCOTHQ58A44 107 aa5.5□□□□□ -1.53
PCDHGC3-207ENST00000622656 LINC00575Q6W349 94 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms