RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 DNHD1Q96M86 4753 aa5.36□□□□□ -1.55
VPS11-209ENST00000622309 GYPEP15421 78 aa5.36□□□□□ -1.55
VPS11-209ENST00000622309 C7orf65Q6ZTY9 151 aa5.36□□□□□ -1.55
VPS11-209ENST00000622309 ACANP16112 2415 aa5.35□□□□□ -1.55
VPS11-209ENST00000622309 FN1P02751 2386 aaKnown RBP5.35□□□□□ -1.55
VPS11-209ENST00000622309 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.35□□□□□ -1.55
VPS11-209ENST00000622309 LINC00959A0A1B0GUT2 108 aa5.35□□□□□ -1.55
VPS11-209ENST00000622309 IGLV1-40P01703 118 aa5.35□□□□□ -1.55
VPS11-209ENST00000622309 IGHV4-59P01825 116 aa5.35□□□□□ -1.55
VPS11-209ENST00000622309 COX17Q14061 63 aa5.35□□□□□ -1.55
VPS11-209ENST00000622309 DEFB136Q30KP8 78 aa5.35□□□□□ -1.55
VPS11-209ENST00000622309 LINC01554Q52M75 96 aa5.35□□□□□ -1.55
VPS11-209ENST00000622309 C10orf25Q5T742 122 aa5.35□□□□□ -1.55
VPS11-209ENST00000622309 B4DSR2 109 aa5.34□□□□□ -1.55
VPS11-209ENST00000622309 C3orf84H3BNL1 204 aa5.34□□□□□ -1.55
VPS11-209ENST00000622309 NDUFB1O75438 58 aa5.34□□□□□ -1.55
VPS11-209ENST00000622309 ETDCA0A1B0GVM5 59 aa5.34□□□□□ -1.55
VPS11-209ENST00000622309 A6NN06 94 aa5.34□□□□□ -1.55
VPS11-209ENST00000622309 DEFB113Q30KQ7 82 aa5.34□□□□□ -1.55
VPS11-209ENST00000622309 TRGV4A0A0C4DH28 118 aa5.33□□□□□ -1.56
VPS11-209ENST00000622309 DEFB112Q30KQ8 113 aa5.33□□□□□ -1.56
VPS11-209ENST00000622309 LINC00612Q8N6U2 182 aa5.33□□□□□ -1.56
VPS11-209ENST00000622309 KLK12Q9UKR0 248 aa5.33□□□□□ -1.56
VPS11-209ENST00000622309 ZCCHC13Q8WW36 166 aaKnown RBP5.33□□□□□ -1.56
VPS11-209ENST00000622309 LCE6AA0A183 80 aa5.33□□□□□ -1.56
VPS11-209ENST00000622309 H0Y9J4 135 aa5.33□□□□□ -1.56
VPS11-209ENST00000622309 C9orf116Q5BN46 136 aaPredicted RBP5.33□□□□□ -1.56
VPS11-209ENST00000622309 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.32□□□□□ -1.56
VPS11-209ENST00000622309 LOC100131303A0A0U1RQF7 123 aa5.32□□□□□ -1.56
VPS11-209ENST00000622309 B9D2Q9BPU9 175 aa5.32□□□□□ -1.56
VPS11-209ENST00000622309 DEFB114Q30KQ6 69 aa5.32□□□□□ -1.56
VPS11-209ENST00000622309 Q8N9P0 234 aaPredicted RBP5.32□□□□□ -1.56
VPS11-209ENST00000622309 A6NDX4 124 aa5.31□□□□□ -1.56
VPS11-209ENST00000622309 CLPSL2Q6UWE3 100 aa5.31□□□□□ -1.56
VPS11-209ENST00000622309 Q75L30 129 aa5.31□□□□□ -1.56
VPS11-209ENST00000622309 SMR3AQ99954 134 aa5.31□□□□□ -1.56
VPS11-209ENST00000622309 FLNAP21333 2647 aaKnown RBP5.31□□□□□ -1.56
VPS11-209ENST00000622309 Q8NDZ9 215 aa5.31□□□□□ -1.56
VPS11-209ENST00000622309 ADM2Q7Z4H4 148 aa5.3□□□□□ -1.56
VPS11-209ENST00000622309 LINC00208Q96KT6 92 aa5.3□□□□□ -1.56
VPS11-209ENST00000622309 IGHV4-28A0A0C4DH34 117 aa5.3□□□□□ -1.56
VPS11-209ENST00000622309 IGLV6-57P01721 117 aa5.3□□□□□ -1.56
VPS11-209ENST00000622309 NOP10Q9NPE3 64 aaKnown RBP5.3□□□□□ -1.56
VPS11-209ENST00000622309 SLURP1P55000 103 aa5.29□□□□□ -1.56
VPS11-209ENST00000622309 C18orf65Q6ZTR6 163 aa5.29□□□□□ -1.56
VPS11-209ENST00000622309 ELOF1P60002 83 aaKnown RBP5.29□□□□□ -1.56
VPS11-209ENST00000622309 ST20-AS1Q8NBB2 130 aa5.29□□□□□ -1.56
VPS11-209ENST00000622309 CDC42SE1Q9NRR8 79 aa5.29□□□□□ -1.56
VPS11-209ENST00000622309 MAP6D1Q9H9H5 199 aa5.28□□□□□ -1.56
VPS11-209ENST00000622309 NSD1Q96L73 2696 aaPredicted RBP5.27□□□□□ -1.57
VPS11-209ENST00000622309 TNP2Q05952 138 aa5.27□□□□□ -1.57
VPS11-209ENST00000622309 KRTAP1-3Q8IUG1 177 aa5.27□□□□□ -1.57
VPS11-209ENST00000622309 HIVEP2P31629 2446 aa5.27□□□□□ -1.57
VPS11-209ENST00000622309 KIAA0087Q14695 138 aa5.27□□□□□ -1.57
VPS11-209ENST00000622309 RETNLBQ9BQ08 111 aa5.26□□□□□ -1.57
VPS11-209ENST00000622309 CR1P17927 2039 aa5.26□□□□□ -1.57
VPS11-209ENST00000622309 IGHV4-30-4P0DP06 118 aa5.25□□□□□ -1.57
VPS11-209ENST00000622309 IGLV10-54A0A075B6I4 117 aa5.25□□□□□ -1.57
VPS11-209ENST00000622309 DSCR9P59020 149 aa5.25□□□□□ -1.57
VPS11-209ENST00000622309 MOBPQ13875 183 aa5.25□□□□□ -1.57
VPS11-209ENST00000622309 LOC101927531A0A1B0GV80 90 aa5.24□□□□□ -1.57
VPS11-209ENST00000622309 PLA2G1BP04054 148 aaKnown RBP5.24□□□□□ -1.57
VPS11-209ENST00000622309 UNQ6190/PRO20217Q6UXQ8 127 aa5.24□□□□□ -1.57
VPS11-209ENST00000622309 WFDC10AQ9H1F0 79 aa5.24□□□□□ -1.57
VPS11-209ENST00000622309 DEFB105AQ8NG35 78 aa5.24□□□□□ -1.57
VPS11-209ENST00000622309 Q9BRP9 147 aa5.24□□□□□ -1.57
VPS11-209ENST00000622309 CHCHD10Q8WYQ3 142 aaPredicted RBP5.23□□□□□ -1.57
VPS11-209ENST00000622309 COL6A5A8TX70 2615 aa5.23□□□□□ -1.57
VPS11-209ENST00000622309 XAGE1AQ9HD64 81 aa5.22□□□□□ -1.57
VPS11-209ENST00000622309 STAB1Q9NY15 2570 aa5.22□□□□□ -1.57
VPS11-209ENST00000622309 SPAG11BQ08648 103 aa5.22□□□□□ -1.57
VPS11-209ENST00000622309 SPANXA2-OT1Q8N9U9 137 aa5.22□□□□□ -1.57
VPS11-209ENST00000622309 A0A1B0GUV1 79 aa5.22□□□□□ -1.57
VPS11-209ENST00000622309 KPRPQ5T749 579 aaPredicted RBP5.22□□□□□ -1.57
VPS11-209ENST00000622309 ZNF702PQ9H963 129 aa5.22□□□□□ -1.57
VPS11-209ENST00000622309 NBEAL2Q6ZNJ1 2754 aa5.21□□□□□ -1.57
VPS11-209ENST00000622309 K7EQZ3 153 aa5.21□□□□□ -1.57
VPS11-209ENST00000622309 Q6YL49 198 aa5.21□□□□□ -1.58
VPS11-209ENST00000622309 A0A1B0GW54 56 aa5.21□□□□□ -1.58
VPS11-209ENST00000622309 C16orf74Q96GX8 76 aa5.21□□□□□ -1.58
VPS11-209ENST00000622309 ANGP03950 147 aaKnown RBP5.2□□□□□ -1.58
VPS11-209ENST00000622309 IGHV6-1A0A0B4J1U7 121 aa5.2□□□□□ -1.58
VPS11-209ENST00000622309 KCNQ1DNQ9H478 68 aa5.2□□□□□ -1.58
VPS11-209ENST00000622309 DNAJC9-AS1A6NH13 148 aa5.19□□□□□ -1.58
VPS11-209ENST00000622309 DEFB116Q30KQ4 102 aa5.19□□□□□ -1.58
VPS11-209ENST00000622309 FBN1P35555 2871 aaKnown RBP5.19□□□□□ -1.58
VPS11-209ENST00000622309 ATRQ13535 2644 aa5.19□□□□□ -1.58
VPS11-209ENST00000622309 DSCR10P59022 87 aa5.19□□□□□ -1.58
VPS11-209ENST00000622309 CASC2Q6XLA1 102 aa5.19□□□□□ -1.58
VPS11-209ENST00000622309 WFDC13Q8IUB5 93 aa5.19□□□□□ -1.58
VPS11-209ENST00000622309 FSHBP01225 129 aa5.19□□□□□ -1.58
VPS11-209ENST00000622309 LINC00528Q8N1L1 170 aa5.19□□□□□ -1.58
VPS11-209ENST00000622309 A0A096LPF7 62 aa5.18□□□□□ -1.58
VPS11-209ENST00000622309 COA5Q86WW8 74 aa5.18□□□□□ -1.58
VPS11-209ENST00000622309 NBEAL1Q6ZS30 2694 aa5.18□□□□□ -1.58
VPS11-209ENST00000622309 A0A0J9YWU9 116 aa5.18□□□□□ -1.58
VPS11-209ENST00000622309 KRTAP1-1Q07627 177 aa5.18□□□□□ -1.58
VPS11-209ENST00000622309 ODF3L2Q3SX64 289 aa5.18□□□□□ -1.58
VPS11-209ENST00000622309 H0Y9P7 68 aa5.17□□□□□ -1.58
VPS11-209ENST00000622309 WFDC10BQ8IUB3 73 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms