RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 EIF4EBP3O60516 100 aaPredicted RBP12.41□□□□□ -0.42
SRRT-218ENST00000620394 S100A7L2Q5SY68 101 aa12.41□□□□□ -0.42
SRRT-218ENST00000620394 SSBP3-AS1Q7Z2R9 100 aa12.41□□□□□ -0.42
SRRT-218ENST00000620394 TRAV23DV6A0A075B6W5 121 aa12.4□□□□□ -0.42
SRRT-218ENST00000620394 ASB16-AS1Q495Z4 193 aa12.4□□□□□ -0.42
SRRT-218ENST00000620394 ADAMTSL4-AS1Q5T5F5 129 aa12.4□□□□□ -0.42
SRRT-218ENST00000620394 IGLV9-49A0A0B4J1Y8 123 aa12.39□□□□□ -0.43
SRRT-218ENST00000620394 SLC7A5P1Q8MH63 180 aa12.39□□□□□ -0.43
SRRT-218ENST00000620394 JOSD1Q15040 202 aaPredicted RBP12.38□□□□□ -0.43
SRRT-218ENST00000620394 ZNF73O43830 326 aaPredicted RBP12.37□□□□□ -0.43
SRRT-218ENST00000620394 Q8N377 158 aa12.37□□□□□ -0.43
SRRT-218ENST00000620394 FSIP2Q5CZC0 6907 aa12.35□□□□□ -0.43
SRRT-218ENST00000620394 SYS1-DBNDD2H3BUS1 97 aa12.35□□□□□ -0.43
SRRT-218ENST00000620394 NPC2P61916 151 aa12.35□□□□□ -0.43
SRRT-218ENST00000620394 LITAFQ99732 161 aa12.35□□□□□ -0.43
SRRT-218ENST00000620394 C5orf52A6NGY3 159 aa12.33□□□□□ -0.44
SRRT-218ENST00000620394 HIST1H2BKO60814 126 aa12.32□□□□□ -0.44
SRRT-218ENST00000620394 HIST1H2BJP06899 126 aa12.32□□□□□ -0.44
SRRT-218ENST00000620394 HIST1H2BOP23527 126 aa12.32□□□□□ -0.44
SRRT-218ENST00000620394 HIST1H2BBP33778 126 aa12.32□□□□□ -0.44
SRRT-218ENST00000620394 HIST1H2BDP58876 126 aa12.32□□□□□ -0.44
SRRT-218ENST00000620394 HIST1H2BCP62807 126 aa12.32□□□□□ -0.44
SRRT-218ENST00000620394 HIST2H2BEQ16778 126 aa12.32□□□□□ -0.44
SRRT-218ENST00000620394 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.32□□□□□ -0.44
SRRT-218ENST00000620394 LINC01545Q5VT33 79 aa12.32□□□□□ -0.44
SRRT-218ENST00000620394 HIST1H2BHQ93079 126 aa12.32□□□□□ -0.44
SRRT-218ENST00000620394 HIST1H2BNQ99877 126 aa12.32□□□□□ -0.44
SRRT-218ENST00000620394 HIST1H2BMQ99879 126 aa12.32□□□□□ -0.44
SRRT-218ENST00000620394 SPANXCQ9NY87 97 aa12.32□□□□□ -0.44
SRRT-218ENST00000620394 CBY1Q9Y3M2 126 aa12.32□□□□□ -0.44
SRRT-218ENST00000620394 TIMM17BO60830 172 aa12.31□□□□□ -0.44
SRRT-218ENST00000620394 SEC61BP60468 96 aaKnown RBP12.31□□□□□ -0.44
SRRT-218ENST00000620394 SLC25A20O43772 301 aa12.3□□□□□ -0.44
SRRT-218ENST00000620394 LINC00308Q8TCZ7 52 aa12.3□□□□□ -0.44
SRRT-218ENST00000620394 KRTAP4-1Q9BYQ7 146 aa12.29□□□□□ -0.44
SRRT-218ENST00000620394 ST20-AS1Q8NBB2 130 aa12.28□□□□□ -0.44
SRRT-218ENST00000620394 C9orf153Q5TBE3 101 aa12.27□□□□□ -0.45
SRRT-218ENST00000620394 PET117Q6UWS5 81 aa12.27□□□□□ -0.45
SRRT-218ENST00000620394 SPRR1BP22528 89 aa12.26□□□□□ -0.45
SRRT-218ENST00000620394 HINT1P49773 126 aaPredicted RBP12.25□□□□□ -0.45
SRRT-218ENST00000620394 SPANXDQ9BXN6 97 aa12.25□□□□□ -0.45
SRRT-218ENST00000620394 ZNF815PA8K554 130 aa12.23□□□□□ -0.45
SRRT-218ENST00000620394 DHRS4-AS1Q9P1J3 65 aa12.22□□□□□ -0.45
SRRT-218ENST00000620394 OR13C6PQ8NH95 151 aa12.21□□□□□ -0.45
SRRT-218ENST00000620394 XP32Q5T750 250 aa12.2□□□□□ -0.46
SRRT-218ENST00000620394 TTTY13Q9BZ97 58 aa12.2□□□□□ -0.46
SRRT-218ENST00000620394 C3orf79P0CE67 100 aa12.19□□□□□ -0.46
SRRT-218ENST00000620394 ELOF1P60002 83 aaKnown RBP12.19□□□□□ -0.46
SRRT-218ENST00000620394 SLC25A34Q6PIV7 304 aa12.19□□□□□ -0.46
SRRT-218ENST00000620394 COA6Q5JTJ3 125 aaKnown RBP12.18□□□□□ -0.46
SRRT-218ENST00000620394 LINC00518Q8N0U6 118 aa12.18□□□□□ -0.46
SRRT-218ENST00000620394 C6orf99Q4VX62 202 aa12.15□□□□□ -0.46
SRRT-218ENST00000620394 COX7BP24311 80 aa12.14□□□□□ -0.47
SRRT-218ENST00000620394 LIMD2Q9BT23 127 aa12.14□□□□□ -0.47
SRRT-218ENST00000620394 LAMTOR3Q9UHA4 124 aa12.13□□□□□ -0.47
SRRT-218ENST00000620394 TRBV7-6A0A0J9YX20 115 aa12.11□□□□□ -0.47
SRRT-218ENST00000620394 LCE2CQ5TA81 110 aa12.11□□□□□ -0.47
SRRT-218ENST00000620394 KRTDAPP60985 99 aa12.1□□□□□ -0.47
SRRT-218ENST00000620394 SCGB1D4Q6XE38 83 aa12.09□□□□□ -0.47
SRRT-218ENST00000620394 CFC1BP0CG36 223 aa12.08□□□□□ -0.48
SRRT-218ENST00000620394 CD164Q04900 197 aa12.08□□□□□ -0.48
SRRT-218ENST00000620394 ANKRD39Q53RE8 183 aa12.08□□□□□ -0.48
SRRT-218ENST00000620394 COPS9Q8WXC6 57 aa12.08□□□□□ -0.48
SRRT-218ENST00000620394 IFITM1P13164 125 aa12.07□□□□□ -0.48
SRRT-218ENST00000620394 C20orf202A1L168 122 aa12.06□□□□□ -0.48
SRRT-218ENST00000620394 Q6ZVH6 145 aa12.06□□□□□ -0.48
SRRT-218ENST00000620394 TEX49A0A1B0GTD5 131 aa12.05□□□□□ -0.48
SRRT-218ENST00000620394 A0A1B0GWB2 263 aa12.05□□□□□ -0.48
SRRT-218ENST00000620394 HRCT1Q6UXD1 115 aa12.05□□□□□ -0.48
SRRT-218ENST00000620394 MT1HP80294 61 aa12.04□□□□□ -0.48
SRRT-218ENST00000620394 TAL2Q16559 108 aa12.04□□□□□ -0.48
SRRT-218ENST00000620394 Q1RN00 199 aa12.04□□□□□ -0.48
SRRT-218ENST00000620394 IGLV5-48A0A075B6I7 105 aa12.03□□□□□ -0.48
SRRT-218ENST00000620394 SMIM29Q86T20 159 aa12.03□□□□□ -0.48
SRRT-218ENST00000620394 KRTAP19-2Q3LHN2 52 aa12.02□□□□□ -0.49
SRRT-218ENST00000620394 PRO1933Q9H354 126 aa12.02□□□□□ -0.49
SRRT-218ENST00000620394 Q5XG85 94 aa12.01□□□□□ -0.49
SRRT-218ENST00000620394 DEFB105AQ8NG35 78 aa12.01□□□□□ -0.49
SRRT-218ENST00000620394 AKR1D1P51857 326 aa12□□□□□ -0.49
SRRT-218ENST00000620394 PCP2Q8IVA1 136 aa12□□□□□ -0.49
SRRT-218ENST00000620394 ATOH7Q8N100 152 aa12□□□□□ -0.49
SRRT-218ENST00000620394 A6NDN8 102 aa11.98□□□□□ -0.49
SRRT-218ENST00000620394 MUSTN1Q8IVN3 82 aa11.98□□□□□ -0.49
SRRT-218ENST00000620394 A4D1N5 150 aa11.97□□□□□ -0.49
SRRT-218ENST00000620394 H7C2G1 150 aa11.96□□□□□ -0.49
SRRT-218ENST00000620394 TRAV13-2A0A0B4J235 113 aa11.94□□□□□ -0.5
SRRT-218ENST00000620394 C9orf92A6NGG3 77 aa11.94□□□□□ -0.5
SRRT-218ENST00000620394 LORP23490 312 aaPredicted RBP11.93□□□□□ -0.5
SRRT-218ENST00000620394 SNRPEP62304 92 aaKnown RBP11.93□□□□□ -0.5
SRRT-218ENST00000620394 PCOTHQ58A44 107 aa11.93□□□□□ -0.5
SRRT-218ENST00000620394 NHP2Q9NX24 153 aaKnown RBP11.93□□□□□ -0.5
SRRT-218ENST00000620394 SMIM11BQ8TCY0 68 aa11.92□□□□□ -0.5
SRRT-218ENST00000620394 KRTAP10-6P60371 365 aaPredicted RBP11.9□□□□□ -0.5
SRRT-218ENST00000620394 C1orf195Q5TG92 126 aa11.9□□□□□ -0.5
SRRT-218ENST00000620394 IGLV8-61A0A075B6I0 122 aa11.88□□□□□ -0.51
SRRT-218ENST00000620394 A0A0G2JQZ4 141 aa11.88□□□□□ -0.51
SRRT-218ENST00000620394 HIST3H2BBQ8N257 126 aa11.84□□□□□ -0.51
SRRT-218ENST00000620394 HIST1H2BLQ99880 126 aa11.83□□□□□ -0.52
SRRT-218ENST00000620394 LINC00575Q6W349 94 aa11.82□□□□□ -0.52
SRRT-218ENST00000620394 VAMP3Q15836 100 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms