RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 Q6ZRP5 223 aa8.56□□□□□ -1.04
SKP2-209ENST00000620197 NSD1Q96L73 2696 aaPredicted RBP8.55□□□□□ -1.04
SKP2-209ENST00000620197 IGLV5-48A0A075B6I7 105 aa8.55□□□□□ -1.04
SKP2-209ENST00000620197 PKD1L1Q8TDX9 2849 aa8.54□□□□□ -1.04
SKP2-209ENST00000620197 KRTAP4-16G5E9R7 235 aaPredicted RBP8.54□□□□□ -1.04
SKP2-209ENST00000620197 CAMK2N2Q96S95 79 aa8.54□□□□□ -1.04
SKP2-209ENST00000620197 HELZ2Q9BYK8 2649 aaKnown RBP8.54□□□□□ -1.04
SKP2-209ENST00000620197 LINC00336Q6ZUF6 198 aa8.54□□□□□ -1.04
SKP2-209ENST00000620197 HIGD2BQ4VC39 106 aa8.53□□□□□ -1.04
SKP2-209ENST00000620197 OCR1Q9BZK8 76 aa8.53□□□□□ -1.04
SKP2-209ENST00000620197 PLA2G2DQ9UNK4 145 aa8.53□□□□□ -1.04
SKP2-209ENST00000620197 NDUFC1O43677 76 aa8.52□□□□□ -1.05
SKP2-209ENST00000620197 TNP2Q05952 138 aa8.52□□□□□ -1.05
SKP2-209ENST00000620197 NREPQ16612 68 aa8.51□□□□□ -1.05
SKP2-209ENST00000620197 TLX1NBP0CAT3 122 aa8.51□□□□□ -1.05
SKP2-209ENST00000620197 HTN3P15516 51 aa8.51□□□□□ -1.05
SKP2-209ENST00000620197 KPRPQ5T749 579 aaPredicted RBP8.51□□□□□ -1.05
SKP2-209ENST00000620197 Q8N377 158 aa8.51□□□□□ -1.05
SKP2-209ENST00000620197 IGLV5-37A0A075B6J1 123 aa8.5□□□□□ -1.05
SKP2-209ENST00000620197 LCE6AA0A183 80 aa8.5□□□□□ -1.05
SKP2-209ENST00000620197 BPY2O14599 106 aa8.5□□□□□ -1.05
SKP2-209ENST00000620197 MRAPQ8TCY5 172 aa8.5□□□□□ -1.05
SKP2-209ENST00000620197 SMIM26A0A096LP01 95 aa8.5□□□□□ -1.05
SKP2-209ENST00000620197 SPRR1AP35321 89 aa8.5□□□□□ -1.05
SKP2-209ENST00000620197 LINC01556Q5JQF7 62 aa8.5□□□□□ -1.05
SKP2-209ENST00000620197 A0A1B0GW54 56 aa8.49□□□□□ -1.05
SKP2-209ENST00000620197 ESRGQ1W209 222 aa8.49□□□□□ -1.05
SKP2-209ENST00000620197 Q8N9L7 120 aa8.49□□□□□ -1.05
SKP2-209ENST00000620197 LINC00474Q9P2X8 69 aa8.49□□□□□ -1.05
SKP2-209ENST00000620197 TMEM254Q8TBM7 123 aa8.49□□□□□ -1.05
SKP2-209ENST00000620197 A0A0U1RQV1 116 aa8.49□□□□□ -1.05
SKP2-209ENST00000620197 SERTAD4-AS1Q5TG53 156 aa8.48□□□□□ -1.05
SKP2-209ENST00000620197 ATP5EP56381 51 aaPredicted RBP8.48□□□□□ -1.05
SKP2-209ENST00000620197 PRO0628Q9UI54 55 aa8.48□□□□□ -1.05
SKP2-209ENST00000620197 KRTAP7-1Q8IUC3 87 aa8.47□□□□□ -1.05
SKP2-209ENST00000620197 LYSTQ99698 3801 aa8.47□□□□□ -1.05
SKP2-209ENST00000620197 C7orf33Q8WU49 177 aa8.46□□□□□ -1.05
SKP2-209ENST00000620197 FAM229BQ4G0N7 80 aa8.46□□□□□ -1.06
SKP2-209ENST00000620197 Q6ZTC4 211 aa8.46□□□□□ -1.06
SKP2-209ENST00000620197 Q9BRP9 147 aa8.46□□□□□ -1.06
SKP2-209ENST00000620197 KRTAP10-11P60412 298 aa8.45□□□□□ -1.06
SKP2-209ENST00000620197 INAFM1C9JVW0 142 aa8.44□□□□□ -1.06
SKP2-209ENST00000620197 Q6ZRX8 168 aa8.44□□□□□ -1.06
SKP2-209ENST00000620197 DNAH10OSP0CZ25 163 aa8.44□□□□□ -1.06
SKP2-209ENST00000620197 SYCNQ0VAF6 134 aa8.44□□□□□ -1.06
SKP2-209ENST00000620197 SPRR4Q96PI1 79 aa8.43□□□□□ -1.06
SKP2-209ENST00000620197 TENM3Q9P273 2699 aa8.43□□□□□ -1.06
SKP2-209ENST00000620197 A0A1W2PNM2 257 aa8.43□□□□□ -1.06
SKP2-209ENST00000620197 RETNQ9HD89 108 aa8.43□□□□□ -1.06
SKP2-209ENST00000620197 IGLV1-50A0A075B6I6 118 aa8.42□□□□□ -1.06
SKP2-209ENST00000620197 J3QKU1 62 aa8.42□□□□□ -1.06
SKP2-209ENST00000620197 DHRS4-AS1Q9P1J3 65 aa8.41□□□□□ -1.06
SKP2-209ENST00000620197 PRYO14603 147 aa8.41□□□□□ -1.06
SKP2-209ENST00000620197 FLNBO75369 2602 aaKnown RBP8.4□□□□□ -1.06
SKP2-209ENST00000620197 BAHCC1Q9P281 2608 aa8.4□□□□□ -1.07
SKP2-209ENST00000620197 C3orf84H3BNL1 204 aa8.39□□□□□ -1.07
SKP2-209ENST00000620197 NOTCH1P46531 2555 aa8.38□□□□□ -1.07
SKP2-209ENST00000620197 ZCCHC13Q8WW36 166 aaKnown RBP8.38□□□□□ -1.07
SKP2-209ENST00000620197 NBEAL1Q6ZS30 2694 aa8.37□□□□□ -1.07
SKP2-209ENST00000620197 Q8NBF4 154 aa8.37□□□□□ -1.07
SKP2-209ENST00000620197 HIGD2AQ9BW72 106 aa8.37□□□□□ -1.07
SKP2-209ENST00000620197 FAM168BA1KXE4 195 aa8.36□□□□□ -1.07
SKP2-209ENST00000620197 DYNC2H1Q8NCM8 4307 aaKnown RBP8.36□□□□□ -1.07
SKP2-209ENST00000620197 HUWE1Q7Z6Z7 4374 aaKnown RBP8.36□□□□□ -1.07
SKP2-209ENST00000620197 DSCR10P59022 87 aa8.36□□□□□ -1.07
SKP2-209ENST00000620197 SMIM29Q86T20 159 aa8.36□□□□□ -1.07
SKP2-209ENST00000620197 NKAPP1Q8N9T2 125 aa8.36□□□□□ -1.07
SKP2-209ENST00000620197 IGKV2D-24A0A075B6R9 120 aa8.35□□□□□ -1.07
SKP2-209ENST00000620197 DNAH10Q8IVF4 4471 aa8.35□□□□□ -1.07
SKP2-209ENST00000620197 MAST4O15021 2626 aa8.34□□□□□ -1.07
SKP2-209ENST00000620197 ST20-AS1Q8NBB2 130 aa8.34□□□□□ -1.08
SKP2-209ENST00000620197 DNAH9Q9NYC9 4486 aa8.33□□□□□ -1.08
SKP2-209ENST00000620197 CASC10Q5T4H9 136 aa8.33□□□□□ -1.08
SKP2-209ENST00000620197 FUSP35637 526 aaKnown RBP eCLIP8.33□□□□□ -1.08
SKP2-209ENST00000620197 C1orf137Q5JT78 98 aa8.33□□□□□ -1.08
SKP2-209ENST00000620197 DEFB131BA0A096LNP1 70 aa8.32□□□□□ -1.08
SKP2-209ENST00000620197 DEFB105AQ8NG35 78 aa8.32□□□□□ -1.08
SKP2-209ENST00000620197 FBN1P35555 2871 aaKnown RBP8.31□□□□□ -1.08
SKP2-209ENST00000620197 IGLV8-61A0A075B6I0 122 aa8.3□□□□□ -1.08
SKP2-209ENST00000620197 RPL37AP8A6NKH3 93 aa8.3□□□□□ -1.08
SKP2-209ENST00000620197 LINC00588Q9Y4M8 146 aa8.3□□□□□ -1.08
SKP2-209ENST00000620197 MPLKIPQ8TAP9 179 aa8.3□□□□□ -1.08
SKP2-209ENST00000620197 FAM30AQ9NZY2 134 aa8.3□□□□□ -1.08
SKP2-209ENST00000620197 MRPL55Q7Z7F7 128 aaKnown RBP8.29□□□□□ -1.08
SKP2-209ENST00000620197 hDV103S1A0JD37 113 aa8.28□□□□□ -1.08
SKP2-209ENST00000620197 C11orf45Q8TAV5 145 aa8.28□□□□□ -1.08
SKP2-209ENST00000620197 CSMD3Q7Z407 3707 aa8.28□□□□□ -1.08
SKP2-209ENST00000620197 COL6A5A8TX70 2615 aa8.28□□□□□ -1.08
SKP2-209ENST00000620197 STAB1Q9NY15 2570 aa8.28□□□□□ -1.08
SKP2-209ENST00000620197 K7EQZ3 153 aa8.27□□□□□ -1.09
SKP2-209ENST00000620197 BRK1Q8WUW1 75 aa8.27□□□□□ -1.09
SKP2-209ENST00000620197 ETDCA0A1B0GVM5 59 aa8.26□□□□□ -1.09
SKP2-209ENST00000620197 PKIGQ9Y2B9 76 aa8.25□□□□□ -1.09
SKP2-209ENST00000620197 DNAH7Q8WXX0 4024 aa8.25□□□□□ -1.09
SKP2-209ENST00000620197 LINC00476Q8WZB0 136 aa8.24□□□□□ -1.09
SKP2-209ENST00000620197 REG3GQ6UW15 175 aa8.23□□□□□ -1.09
SKP2-209ENST00000620197 IGFL1Q6UW32 110 aa8.23□□□□□ -1.09
SKP2-209ENST00000620197 C1orf64Q8NEQ6 169 aa8.23□□□□□ -1.09
SKP2-209ENST00000620197 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.22□□□□□ -1.09
SKP2-209ENST00000620197 CYP4F30PQ9H0H9 118 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms