RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 TMEM256-PLSCR3K7ERE1 68 aa12.97□□□□□ -0.33
MMP28-207ENST00000619655 Q6ZQY7 126 aa12.97□□□□□ -0.33
MMP28-207ENST00000619655 LINC00643Q86TS7 51 aa12.97□□□□□ -0.33
MMP28-207ENST00000619655 SMIM20Q8N5G0 67 aa12.97□□□□□ -0.33
MMP28-207ENST00000619655 FAM236AA0A1B0GUQ0 79 aa12.96□□□□□ -0.34
MMP28-207ENST00000619655 FAM236BA0A1B0GV22 79 aa12.96□□□□□ -0.34
MMP28-207ENST00000619655 CNBPP62633 177 aaKnown RBP12.96□□□□□ -0.34
MMP28-207ENST00000619655 GAGE2AQ6NT46 116 aa12.96□□□□□ -0.34
MMP28-207ENST00000619655 KRTAP7-1Q8IUC3 87 aa12.96□□□□□ -0.34
MMP28-207ENST00000619655 PLA2G2DQ9UNK4 145 aa12.96□□□□□ -0.34
MMP28-207ENST00000619655 VPS13DQ5THJ4 4388 aa12.96□□□□□ -0.34
MMP28-207ENST00000619655 SDIM1Q6ZPB5 146 aa12.95□□□□□ -0.34
MMP28-207ENST00000619655 SMCR5Q8TEV8 140 aa12.95□□□□□ -0.34
MMP28-207ENST00000619655 A0A096LNI7 61 aa12.94□□□□□ -0.34
MMP28-207ENST00000619655 C14orf177Q52M58 125 aa12.94□□□□□ -0.34
MMP28-207ENST00000619655 KMT2AQ03164 3969 aa12.94□□□□□ -0.34
MMP28-207ENST00000619655 KCNQ1DNQ9H478 68 aa12.93□□□□□ -0.34
MMP28-207ENST00000619655 TRBV7-6A0A0J9YX20 115 aa12.93□□□□□ -0.34
MMP28-207ENST00000619655 OBSCN-AS1Q96MR7 158 aa12.92□□□□□ -0.34
MMP28-207ENST00000619655 LRCOL1A6NCL2 159 aa12.91□□□□□ -0.34
MMP28-207ENST00000619655 Q6ZRN7 208 aaPredicted RBP12.91□□□□□ -0.34
MMP28-207ENST00000619655 KRTAP21-3Q3LHN1 58 aa12.91□□□□□ -0.34
MMP28-207ENST00000619655 MRPL55Q7Z7F7 128 aaKnown RBP12.91□□□□□ -0.34
MMP28-207ENST00000619655 LINC00528Q8N1L1 170 aa12.9□□□□□ -0.34
MMP28-207ENST00000619655 IGLV5-37A0A075B6J1 123 aa12.9□□□□□ -0.34
MMP28-207ENST00000619655 IGLV1-50A0A075B6I6 118 aa12.89□□□□□ -0.35
MMP28-207ENST00000619655 C16orf90A8MZG2 172 aa12.89□□□□□ -0.35
MMP28-207ENST00000619655 LAMTOR3Q9UHA4 124 aa12.89□□□□□ -0.35
MMP28-207ENST00000619655 JMJD7-PLA2G4BH0Y9G9 81 aa12.87□□□□□ -0.35
MMP28-207ENST00000619655 CHTF8P0CG12 524 aa12.87□□□□□ -0.35
MMP28-207ENST00000619655 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.86□□□□□ -0.35
MMP28-207ENST00000619655 C3orf22Q8N5N4 141 aa12.86□□□□□ -0.35
MMP28-207ENST00000619655 A0A1W2PNN7 141 aa12.85□□□□□ -0.35
MMP28-207ENST00000619655 UQCRQO14949 82 aa12.85□□□□□ -0.35
MMP28-207ENST00000619655 C9orf153Q5TBE3 101 aa12.84□□□□□ -0.35
MMP28-207ENST00000619655 PRYO14603 147 aa12.84□□□□□ -0.35
MMP28-207ENST00000619655 ETDCA0A1B0GVM5 59 aa12.83□□□□□ -0.36
MMP28-207ENST00000619655 C9orf163Q8N9P6 203 aa12.82□□□□□ -0.36
MMP28-207ENST00000619655 LY6G6CO95867 125 aa12.82□□□□□ -0.36
MMP28-207ENST00000619655 DNAH2Q9P225 4427 aa12.81□□□□□ -0.36
MMP28-207ENST00000619655 FUSP35637 526 aaKnown RBP eCLIP12.81□□□□□ -0.36
MMP28-207ENST00000619655 RBM3P98179 157 aaKnown RBP12.81□□□□□ -0.36
MMP28-207ENST00000619655 Q6ZRX8 168 aa12.8□□□□□ -0.36
MMP28-207ENST00000619655 DEFB105AQ8NG35 78 aa12.8□□□□□ -0.36
MMP28-207ENST00000619655 KRTAP4-16G5E9R7 235 aaPredicted RBP12.79□□□□□ -0.36
MMP28-207ENST00000619655 CCKP06307 115 aa12.78□□□□□ -0.36
MMP28-207ENST00000619655 SPRR1AP35321 89 aa12.78□□□□□ -0.36
MMP28-207ENST00000619655 REG3GQ6UW15 175 aa12.78□□□□□ -0.36
MMP28-207ENST00000619655 Q6ZR54 194 aa12.78□□□□□ -0.36
MMP28-207ENST00000619655 Q9BRP9 147 aa12.78□□□□□ -0.36
MMP28-207ENST00000619655 A0A087WTM6 91 aa12.77□□□□□ -0.36
MMP28-207ENST00000619655 LINC00846Q9NV44 126 aa12.77□□□□□ -0.36
MMP28-207ENST00000619655 H3BQ85 93 aa12.77□□□□□ -0.37
MMP28-207ENST00000619655 GHRHP01286 108 aa12.77□□□□□ -0.37
MMP28-207ENST00000619655 HIST1H4AP62805 103 aaKnown RBP12.77□□□□□ -0.37
MMP28-207ENST00000619655 ATOX1O00244 68 aa12.76□□□□□ -0.37
MMP28-207ENST00000619655 COX7CP15954 63 aa12.76□□□□□ -0.37
MMP28-207ENST00000619655 PHF5AQ7RTV0 110 aaKnown RBP12.75□□□□□ -0.37
MMP28-207ENST00000619655 DPH3Q96FX2 82 aa12.75□□□□□ -0.37
MMP28-207ENST00000619655 DSCR8Q96T75 97 aa12.75□□□□□ -0.37
MMP28-207ENST00000619655 DHRS4-AS1Q9P1J3 65 aa12.75□□□□□ -0.37
MMP28-207ENST00000619655 HECTD4Q9Y4D8 3996 aa12.75□□□□□ -0.37
MMP28-207ENST00000619655 UBE2BP63146 152 aa12.74□□□□□ -0.37
MMP28-207ENST00000619655 PANO1I0J062 215 aa12.73□□□□□ -0.37
MMP28-207ENST00000619655 WWC2-AS2Q96NR7 200 aa12.73□□□□□ -0.37
MMP28-207ENST00000619655 Q6ZQT0 140 aa12.72□□□□□ -0.37
MMP28-207ENST00000619655 C1orf134Q5TEV5 83 aa12.71□□□□□ -0.37
MMP28-207ENST00000619655 CRYGAP11844 174 aa12.71□□□□□ -0.38
MMP28-207ENST00000619655 Q6JHZ5 121 aa12.71□□□□□ -0.38
MMP28-207ENST00000619655 ST20-AS1Q8NBB2 130 aa12.71□□□□□ -0.38
MMP28-207ENST00000619655 ERC2-IT1O76042 136 aa12.7□□□□□ -0.38
MMP28-207ENST00000619655 PRLHP81277 87 aa12.7□□□□□ -0.38
MMP28-207ENST00000619655 FAM19A1Q7Z5A9 133 aa12.7□□□□□ -0.38
MMP28-207ENST00000619655 PKIGQ9Y2B9 76 aa12.7□□□□□ -0.38
MMP28-207ENST00000619655 LOC110117498A0A087WWA1 95 aa12.68□□□□□ -0.38
MMP28-207ENST00000619655 KRTAP11-1Q8IUC1 163 aa12.68□□□□□ -0.38
MMP28-207ENST00000619655 Q8N377 158 aa12.68□□□□□ -0.38
MMP28-207ENST00000619655 LINC00474Q9P2X8 69 aa12.68□□□□□ -0.38
MMP28-207ENST00000619655 LINC00476Q8WZB0 136 aa12.67□□□□□ -0.38
MMP28-207ENST00000619655 RTL8CO15255 209 aa12.67□□□□□ -0.38
MMP28-207ENST00000619655 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.67□□□□□ -0.38
MMP28-207ENST00000619655 IGKV3D-7A0A0C4DH55 119 aa12.66□□□□□ -0.38
MMP28-207ENST00000619655 LINC01547P58512 204 aaPredicted RBP12.66□□□□□ -0.38
MMP28-207ENST00000619655 J3KT08 172 aa12.64□□□□□ -0.39
MMP28-207ENST00000619655 TRBV7-4A0A0J9YYF1 115 aa12.63□□□□□ -0.39
MMP28-207ENST00000619655 HIGD2AQ9BW72 106 aa12.63□□□□□ -0.39
MMP28-207ENST00000619655 SPACA4Q8TDM5 124 aa12.62□□□□□ -0.39
MMP28-207ENST00000619655 PDE6GP18545 87 aa12.61□□□□□ -0.39
MMP28-207ENST00000619655 SERP2Q8N6R1 65 aa12.61□□□□□ -0.39
MMP28-207ENST00000619655 SRRM2Q9UQ35 2752 aaKnown RBP12.6□□□□□ -0.39
MMP28-207ENST00000619655 IGLV5-52A0A0A0MRZ9 124 aa12.6□□□□□ -0.39
MMP28-207ENST00000619655 RPS28P62857 69 aaKnown RBP12.59□□□□□ -0.39
MMP28-207ENST00000619655 UBL5Q9BZL1 73 aa12.59□□□□□ -0.39
MMP28-207ENST00000619655 IGLV5-48A0A075B6I7 105 aa12.58□□□□□ -0.4
MMP28-207ENST00000619655 TNP2Q05952 138 aa12.58□□□□□ -0.4
MMP28-207ENST00000619655 DNAH17Q9UFH2 4485 aa12.58□□□□□ -0.4
MMP28-207ENST00000619655 HYDINQ4G0P3 5121 aa12.57□□□□□ -0.4
MMP28-207ENST00000619655 A0A087WVE0 104 aa12.57□□□□□ -0.4
MMP28-207ENST00000619655 EPM2AB3EWF7 344 aa12.56□□□□□ -0.4
MMP28-207ENST00000619655 TMEM258P61165 79 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms