RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 BCE1O60756 84 aa4.75□□□□□ -1.65
SRGAP3-213ENST00000618999 Q6ZQT0 140 aa4.75□□□□□ -1.65
SRGAP3-213ENST00000618999 IGLV9-49A0A0B4J1Y8 123 aa4.75□□□□□ -1.65
SRGAP3-213ENST00000618999 XAGE1AQ9HD64 81 aa4.75□□□□□ -1.65
SRGAP3-213ENST00000618999 NBEAL1Q6ZS30 2694 aa4.75□□□□□ -1.65
SRGAP3-213ENST00000618999 LOC110117498A0A087WWA1 95 aa4.74□□□□□ -1.65
SRGAP3-213ENST00000618999 NDUFC1O43677 76 aa4.74□□□□□ -1.65
SRGAP3-213ENST00000618999 F8WEM9 126 aa4.74□□□□□ -1.65
SRGAP3-213ENST00000618999 Q8N3U1 123 aa4.74□□□□□ -1.65
SRGAP3-213ENST00000618999 WWC2-AS2Q96NR7 200 aa4.74□□□□□ -1.65
SRGAP3-213ENST00000618999 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.74□□□□□ -1.65
SRGAP3-213ENST00000618999 LINC00336Q6ZUF6 198 aa4.74□□□□□ -1.65
SRGAP3-213ENST00000618999 CAMK2N2Q96S95 79 aa4.74□□□□□ -1.65
SRGAP3-213ENST00000618999 NANOS2P60321 138 aaKnown RBP4.73□□□□□ -1.65
SRGAP3-213ENST00000618999 CXCL6P80162 114 aa4.73□□□□□ -1.65
SRGAP3-213ENST00000618999 NREPQ16612 68 aa4.73□□□□□ -1.65
SRGAP3-213ENST00000618999 C6orf223Q8N319 242 aa4.73□□□□□ -1.65
SRGAP3-213ENST00000618999 ZNF73O43830 326 aaPredicted RBP4.73□□□□□ -1.65
SRGAP3-213ENST00000618999 A0A0J9YWU9 116 aa4.73□□□□□ -1.65
SRGAP3-213ENST00000618999 K7EIL1 84 aa4.73□□□□□ -1.65
SRGAP3-213ENST00000618999 LINC00612Q8N6U2 182 aa4.73□□□□□ -1.65
SRGAP3-213ENST00000618999 MPLKIPQ8TAP9 179 aa4.73□□□□□ -1.65
SRGAP3-213ENST00000618999 SMIM26A0A096LP01 95 aa4.72□□□□□ -1.65
SRGAP3-213ENST00000618999 KIAA0087Q14695 138 aa4.72□□□□□ -1.65
SRGAP3-213ENST00000618999 RMI2Q96E14 147 aa4.72□□□□□ -1.65
SRGAP3-213ENST00000618999 ATP5EP56381 51 aaPredicted RBP4.72□□□□□ -1.65
SRGAP3-213ENST00000618999 C11orf45Q8TAV5 145 aa4.72□□□□□ -1.65
SRGAP3-213ENST00000618999 PMAIP1Q13794 54 aa4.71□□□□□ -1.65
SRGAP3-213ENST00000618999 HIGD2BQ4VC39 106 aa4.71□□□□□ -1.66
SRGAP3-213ENST00000618999 LCE2AQ5TA79 106 aaPredicted RBP4.71□□□□□ -1.66
SRGAP3-213ENST00000618999 LYPD5Q6UWN5 251 aa4.71□□□□□ -1.66
SRGAP3-213ENST00000618999 TRAV10A0A0B4J240 114 aa4.71□□□□□ -1.66
SRGAP3-213ENST00000618999 C10orf25Q5T742 122 aa4.71□□□□□ -1.66
SRGAP3-213ENST00000618999 LELP1Q5T871 98 aa4.71□□□□□ -1.66
SRGAP3-213ENST00000618999 Q6ZTC4 211 aa4.71□□□□□ -1.66
SRGAP3-213ENST00000618999 BPY2O14599 106 aa4.7□□□□□ -1.66
SRGAP3-213ENST00000618999 NKAPP1Q8N9T2 125 aa4.7□□□□□ -1.66
SRGAP3-213ENST00000618999 DEFB105AQ8NG35 78 aa4.7□□□□□ -1.66
SRGAP3-213ENST00000618999 H7BZZ5 65 aa4.69□□□□□ -1.66
SRGAP3-213ENST00000618999 IGLV6-57P01721 117 aa4.69□□□□□ -1.66
SRGAP3-213ENST00000618999 KLKP1Q107X0 134 aa4.69□□□□□ -1.66
SRGAP3-213ENST00000618999 CDK2AP2O75956 126 aa4.69□□□□□ -1.66
SRGAP3-213ENST00000618999 FUSP35637 526 aaKnown RBP eCLIP4.69□□□□□ -1.66
SRGAP3-213ENST00000618999 DEFB131BA0A096LNP1 70 aa4.69□□□□□ -1.66
SRGAP3-213ENST00000618999 M0R378 163 aa4.69□□□□□ -1.66
SRGAP3-213ENST00000618999 TMEM254Q8TBM7 123 aa4.68□□□□□ -1.66
SRGAP3-213ENST00000618999 KRTAP23-1A1A580 65 aa4.68□□□□□ -1.66
SRGAP3-213ENST00000618999 OXTP01178 125 aa4.68□□□□□ -1.66
SRGAP3-213ENST00000618999 M0R2N4 97 aa4.68□□□□□ -1.66
SRGAP3-213ENST00000618999 KPRPQ5T749 579 aaPredicted RBP4.68□□□□□ -1.66
SRGAP3-213ENST00000618999 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.68□□□□□ -1.66
SRGAP3-213ENST00000618999 TM2D3Q9BRN9 247 aa4.67□□□□□ -1.66
SRGAP3-213ENST00000618999 TRBV7-6A0A0J9YX20 115 aa4.67□□□□□ -1.66
SRGAP3-213ENST00000618999 C3orf84H3BNL1 204 aa4.67□□□□□ -1.66
SRGAP3-213ENST00000618999 TENM3Q9P273 2699 aa4.67□□□□□ -1.66
SRGAP3-213ENST00000618999 Q5XG85 94 aa4.67□□□□□ -1.66
SRGAP3-213ENST00000618999 C6orf48Q9UBA6 75 aa4.66□□□□□ -1.66
SRGAP3-213ENST00000618999 ELOF1P60002 83 aaKnown RBP4.66□□□□□ -1.66
SRGAP3-213ENST00000618999 IGKV2D-24A0A075B6R9 120 aa4.65□□□□□ -1.66
SRGAP3-213ENST00000618999 Q8N9L7 120 aa4.65□□□□□ -1.66
SRGAP3-213ENST00000618999 Q8NDZ9 215 aa4.65□□□□□ -1.66
SRGAP3-213ENST00000618999 GVQW2A0A096LPI5 108 aaPredicted RBP4.65□□□□□ -1.66
SRGAP3-213ENST00000618999 TRBV7-4A0A0J9YYF1 115 aa4.65□□□□□ -1.66
SRGAP3-213ENST00000618999 ETDCA0A1B0GVM5 59 aa4.64□□□□□ -1.67
SRGAP3-213ENST00000618999 SPTSSBQ8NFR3 76 aa4.64□□□□□ -1.67
SRGAP3-213ENST00000618999 Q6ZRU5 148 aa4.63□□□□□ -1.67
SRGAP3-213ENST00000618999 B9D2Q9BPU9 175 aa4.63□□□□□ -1.67
SRGAP3-213ENST00000618999 SYCNQ0VAF6 134 aa4.62□□□□□ -1.67
SRGAP3-213ENST00000618999 H3BNG1 76 aa4.62□□□□□ -1.67
SRGAP3-213ENST00000618999 ERC2-IT1O76042 136 aa4.62□□□□□ -1.67
SRGAP3-213ENST00000618999 ESRGQ1W209 222 aa4.62□□□□□ -1.67
SRGAP3-213ENST00000618999 PRR34Q9NV39 138 aa4.62□□□□□ -1.67
SRGAP3-213ENST00000618999 STAB2Q8WWQ8 2551 aa4.62□□□□□ -1.67
SRGAP3-213ENST00000618999 CD164Q04900 197 aa4.61□□□□□ -1.67
SRGAP3-213ENST00000618999 WFDC10BQ8IUB3 73 aa4.61□□□□□ -1.67
SRGAP3-213ENST00000618999 DHRS4-AS1Q9P1J3 65 aa4.61□□□□□ -1.67
SRGAP3-213ENST00000618999 UBE2BP63146 152 aa4.61□□□□□ -1.67
SRGAP3-213ENST00000618999 LINC00474Q9P2X8 69 aa4.61□□□□□ -1.67
SRGAP3-213ENST00000618999 HIGD2AQ9BW72 106 aa4.6□□□□□ -1.67
SRGAP3-213ENST00000618999 CMYA5Q8N3K9 4069 aa4.59□□□□□ -1.67
SRGAP3-213ENST00000618999 IGLV5-37A0A075B6J1 123 aa4.59□□□□□ -1.67
SRGAP3-213ENST00000618999 IGLV5-52A0A0A0MRZ9 124 aa4.59□□□□□ -1.67
SRGAP3-213ENST00000618999 IGKV4-1P06312 121 aa4.59□□□□□ -1.67
SRGAP3-213ENST00000618999 C1orf137Q5JT78 98 aa4.59□□□□□ -1.67
SRGAP3-213ENST00000618999 SMIM29Q86T20 159 aa4.58□□□□□ -1.68
SRGAP3-213ENST00000618999 ANK2Q01484 3957 aa4.58□□□□□ -1.68
SRGAP3-213ENST00000618999 RPL37AP8A6NKH3 93 aa4.58□□□□□ -1.68
SRGAP3-213ENST00000618999 UBE2DNLQ8IWF7 75 aa4.58□□□□□ -1.68
SRGAP3-213ENST00000618999 MP68P56378 58 aa4.57□□□□□ -1.68
SRGAP3-213ENST00000618999 FP248Q71RG6 208 aaPredicted RBP4.57□□□□□ -1.68
SRGAP3-213ENST00000618999 DNHD1Q96M86 4753 aa4.57□□□□□ -1.68
SRGAP3-213ENST00000618999 A0A1B0GW54 56 aa4.56□□□□□ -1.68
SRGAP3-213ENST00000618999 C7orf33Q8WU49 177 aa4.56□□□□□ -1.68
SRGAP3-213ENST00000618999 LINC00588Q9Y4M8 146 aa4.56□□□□□ -1.68
SRGAP3-213ENST00000618999 Q6ZRP5 223 aa4.56□□□□□ -1.68
SRGAP3-213ENST00000618999 LRCOL1A6NCL2 159 aa4.56□□□□□ -1.68
SRGAP3-213ENST00000618999 OCR1Q9BZK8 76 aa4.56□□□□□ -1.68
SRGAP3-213ENST00000618999 EPM2AB3EWF7 344 aa4.55□□□□□ -1.68
SRGAP3-213ENST00000618999 PRR4Q16378 134 aa4.55□□□□□ -1.68
SRGAP3-213ENST00000618999 LINC01556Q5JQF7 62 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms