RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 Q6ZRU5 148 aa2.85□□□□□ -1.95
SEC22B-202ENST00000618538 DNAH3Q8TD57 4116 aa2.85□□□□□ -1.95
SEC22B-202ENST00000618538 ATOX1O00244 68 aa2.84□□□□□ -1.95
SEC22B-202ENST00000618538 PLA2G2DQ9UNK4 145 aa2.84□□□□□ -1.95
SEC22B-202ENST00000618538 TRAV23DV6A0A075B6W5 121 aa2.84□□□□□ -1.96
SEC22B-202ENST00000618538 LOC110117498A0A087WWA1 95 aa2.84□□□□□ -1.96
SEC22B-202ENST00000618538 CRYGAP11844 174 aa2.84□□□□□ -1.96
SEC22B-202ENST00000618538 ESRGQ1W209 222 aa2.84□□□□□ -1.96
SEC22B-202ENST00000618538 DNAH1Q9P2D7 4330 aa2.83□□□□□ -1.96
SEC22B-202ENST00000618538 ZNF73O43830 326 aaPredicted RBP2.83□□□□□ -1.96
SEC22B-202ENST00000618538 ELOF1P60002 83 aaKnown RBP2.83□□□□□ -1.96
SEC22B-202ENST00000618538 COL6A5A8TX70 2615 aa2.83□□□□□ -1.96
SEC22B-202ENST00000618538 STAB2Q8WWQ8 2551 aa2.83□□□□□ -1.96
SEC22B-202ENST00000618538 LOC107984640A0A0U1RRK4 108 aa2.83□□□□□ -1.96
SEC22B-202ENST00000618538 RBM3P98179 157 aaKnown RBP2.83□□□□□ -1.96
SEC22B-202ENST00000618538 Q6ZRP5 223 aa2.83□□□□□ -1.96
SEC22B-202ENST00000618538 SERP2Q8N6R1 65 aa2.83□□□□□ -1.96
SEC22B-202ENST00000618538 MUC7Q8TAX7 377 aa2.83□□□□□ -1.96
SEC22B-202ENST00000618538 CAMK2N2Q96S95 79 aa2.83□□□□□ -1.96
SEC22B-202ENST00000618538 TRBV7-4A0A0J9YYF1 115 aa2.82□□□□□ -1.96
SEC22B-202ENST00000618538 H3BNG1 76 aa2.82□□□□□ -1.96
SEC22B-202ENST00000618538 OXTP01178 125 aa2.82□□□□□ -1.96
SEC22B-202ENST00000618538 EGFEM1PQ0D2K5 195 aa2.82□□□□□ -1.96
SEC22B-202ENST00000618538 CASC10Q5T4H9 136 aa2.82□□□□□ -1.96
SEC22B-202ENST00000618538 SERTAD4-AS1Q5TG53 156 aa2.82□□□□□ -1.96
SEC22B-202ENST00000618538 Q6ZVQ6 151 aa2.82□□□□□ -1.96
SEC22B-202ENST00000618538 DIRC1Q969H9 104 aa2.82□□□□□ -1.96
SEC22B-202ENST00000618538 LAMTOR3Q9UHA4 124 aa2.82□□□□□ -1.96
SEC22B-202ENST00000618538 COL7A1Q02388 2944 aa2.82□□□□□ -1.96
SEC22B-202ENST00000618538 NDUFC2-KCTD14E9PQ53 114 aa2.81□□□□□ -1.96
SEC22B-202ENST00000618538 COX7BP24311 80 aa2.81□□□□□ -1.96
SEC22B-202ENST00000618538 LINC01547P58512 204 aaPredicted RBP2.81□□□□□ -1.96
SEC22B-202ENST00000618538 KRTAP24-1Q3LI83 254 aa2.81□□□□□ -1.96
SEC22B-202ENST00000618538 KRTAP7-1Q8IUC3 87 aa2.81□□□□□ -1.96
SEC22B-202ENST00000618538 TRBV7-6A0A0J9YX20 115 aa2.81□□□□□ -1.96
SEC22B-202ENST00000618538 ATP5EP2Q5VTU8 51 aa2.81□□□□□ -1.96
SEC22B-202ENST00000618538 SCXQ7RTU7 201 aa2.81□□□□□ -1.96
SEC22B-202ENST00000618538 TRAV10A0A0B4J240 114 aa2.8□□□□□ -1.96
SEC22B-202ENST00000618538 M0R378 163 aa2.8□□□□□ -1.96
SEC22B-202ENST00000618538 LINC01556Q5JQF7 62 aa2.8□□□□□ -1.96
SEC22B-202ENST00000618538 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.8□□□□□ -1.96
SEC22B-202ENST00000618538 UBL5Q9BZL1 73 aa2.8□□□□□ -1.96
SEC22B-202ENST00000618538 MGAM2Q2M2H8 2515 aa2.8□□□□□ -1.96
SEC22B-202ENST00000618538 IGKV2D-24A0A075B6R9 120 aa2.8□□□□□ -1.96
SEC22B-202ENST00000618538 FAM168BA1KXE4 195 aa2.8□□□□□ -1.96
SEC22B-202ENST00000618538 C7orf33Q8WU49 177 aa2.8□□□□□ -1.96
SEC22B-202ENST00000618538 LYSTQ99698 3801 aa2.8□□□□□ -1.96
SEC22B-202ENST00000618538 HUWE1Q7Z6Z7 4374 aaKnown RBP2.8□□□□□ -1.96
SEC22B-202ENST00000618538 TENM2Q9NT68 2774 aa2.79□□□□□ -1.96
SEC22B-202ENST00000618538 DNAH10Q8IVF4 4471 aa2.79□□□□□ -1.96
SEC22B-202ENST00000618538 DEFB131BA0A096LNP1 70 aa2.79□□□□□ -1.96
SEC22B-202ENST00000618538 PRB2P02812 416 aaPredicted RBP2.79□□□□□ -1.96
SEC22B-202ENST00000618538 HAMPP81172 84 aa2.79□□□□□ -1.96
SEC22B-202ENST00000618538 DSCR8Q96T75 97 aa2.79□□□□□ -1.96
SEC22B-202ENST00000618538 SRRM2Q9UQ35 2752 aaKnown RBP2.79□□□□□ -1.96
SEC22B-202ENST00000618538 KRTAP4-16G5E9R7 235 aaPredicted RBP2.78□□□□□ -1.96
SEC22B-202ENST00000618538 DNAH10OSP0CZ25 163 aa2.78□□□□□ -1.96
SEC22B-202ENST00000618538 KRTAP5-9P26371 169 aa2.78□□□□□ -1.96
SEC22B-202ENST00000618538 SYCNQ0VAF6 134 aa2.78□□□□□ -1.96
SEC22B-202ENST00000618538 Q8N9L7 120 aa2.78□□□□□ -1.96
SEC22B-202ENST00000618538 KRTAP3-1Q9BYR8 98 aa2.78□□□□□ -1.96
SEC22B-202ENST00000618538 FAM30AQ9NZY2 134 aa2.78□□□□□ -1.96
SEC22B-202ENST00000618538 C20orf197Q8N268 126 aa2.78□□□□□ -1.96
SEC22B-202ENST00000618538 Q8N377 158 aa2.78□□□□□ -1.96
SEC22B-202ENST00000618538 DPH3Q96FX2 82 aa2.78□□□□□ -1.96
SEC22B-202ENST00000618538 Q9BRP9 147 aa2.78□□□□□ -1.96
SEC22B-202ENST00000618538 KCNQ1DNQ9H478 68 aa2.78□□□□□ -1.96
SEC22B-202ENST00000618538 LINC00588Q9Y4M8 146 aa2.78□□□□□ -1.96
SEC22B-202ENST00000618538 RPL37AP8A6NKH3 93 aa2.77□□□□□ -1.97
SEC22B-202ENST00000618538 TMEM258P61165 79 aa2.77□□□□□ -1.97
SEC22B-202ENST00000618538 CXCL6P80162 114 aa2.77□□□□□ -1.97
SEC22B-202ENST00000618538 C11orf45Q8TAV5 145 aa2.77□□□□□ -1.97
SEC22B-202ENST00000618538 H7BZZ5 65 aa2.77□□□□□ -1.97
SEC22B-202ENST00000618538 J3KT08 172 aa2.77□□□□□ -1.97
SEC22B-202ENST00000618538 FAM19A5Q7Z5A7 132 aaPredicted RBP2.77□□□□□ -1.97
SEC22B-202ENST00000618538 ST20-AS1Q8NBB2 130 aa2.77□□□□□ -1.97
SEC22B-202ENST00000618538 TM2D3Q9BRN9 247 aa2.77□□□□□ -1.97
SEC22B-202ENST00000618538 DNAH9Q9NYC9 4486 aa2.76□□□□□ -1.97
SEC22B-202ENST00000618538 BPY2O14599 106 aa2.76□□□□□ -1.97
SEC22B-202ENST00000618538 ERC2-IT1O76042 136 aa2.76□□□□□ -1.97
SEC22B-202ENST00000618538 IGKV4-1P06312 121 aa2.76□□□□□ -1.97
SEC22B-202ENST00000618538 PDE6GP18545 87 aa2.76□□□□□ -1.97
SEC22B-202ENST00000618538 KRTAP1-5Q9BYS1 174 aa2.76□□□□□ -1.97
SEC22B-202ENST00000618538 IGLV1-50A0A075B6I6 118 aa2.76□□□□□ -1.97
SEC22B-202ENST00000618538 IGLV5-48A0A075B6I7 105 aa2.76□□□□□ -1.97
SEC22B-202ENST00000618538 TRAV7A0A075B6U4 112 aa2.76□□□□□ -1.97
SEC22B-202ENST00000618538 A0A1W2PNM2 257 aa2.76□□□□□ -1.97
SEC22B-202ENST00000618538 C3orf84H3BNL1 204 aa2.76□□□□□ -1.97
SEC22B-202ENST00000618538 H3BQ85 93 aa2.76□□□□□ -1.97
SEC22B-202ENST00000618538 TLX1NBP0CAT3 122 aa2.76□□□□□ -1.97
SEC22B-202ENST00000618538 SPRR1AP35321 89 aa2.76□□□□□ -1.97
SEC22B-202ENST00000618538 RPS28P62857 69 aaKnown RBP2.76□□□□□ -1.97
SEC22B-202ENST00000618538 Q6ZRX8 168 aa2.76□□□□□ -1.97
SEC22B-202ENST00000618538 Q8N1X5 172 aa2.76□□□□□ -1.97
SEC22B-202ENST00000618538 DEFB105AQ8NG35 78 aa2.76□□□□□ -1.97
SEC22B-202ENST00000618538 RMI2Q96E14 147 aa2.76□□□□□ -1.97
SEC22B-202ENST00000618538 SNURFQ9Y675 71 aa2.76□□□□□ -1.97
SEC22B-202ENST00000618538 CSMD3Q7Z407 3707 aa2.75□□□□□ -1.97
SEC22B-202ENST00000618538 IGLV5-37A0A075B6J1 123 aa2.75□□□□□ -1.97
SEC22B-202ENST00000618538 NKAPP1Q8N9T2 125 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms