RNA–Protein interactions for RNA: ENST00000618072.4

CDK2AP1-207, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 3 BASIC

Gene CDK2AP1, Length 1,144 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-207ENST00000618072 TRBV10-3A0A0K0K1G6 114 aa9.66□□□□□ -0.86
CDK2AP1-207ENST00000618072 SPRR1AP35321 89 aa9.66□□□□□ -0.86
CDK2AP1-207ENST00000618072 TSPEAR-AS2P59090 65 aa9.66□□□□□ -0.86
CDK2AP1-207ENST00000618072 LINC00483Q53H64 154 aa9.66□□□□□ -0.86
CDK2AP1-207ENST00000618072 XP32Q5T750 250 aa9.66□□□□□ -0.86
CDK2AP1-207ENST00000618072 KCNQ1DNQ9H478 68 aa9.66□□□□□ -0.86
CDK2AP1-207ENST00000618072 KRTAP4-16G5E9R7 235 aaPredicted RBP9.65□□□□□ -0.86
CDK2AP1-207ENST00000618072 SLC25A20O43772 301 aa9.65□□□□□ -0.86
CDK2AP1-207ENST00000618072 C3orf79P0CE67 100 aa9.65□□□□□ -0.86
CDK2AP1-207ENST00000618072 HERVK_113P61574 105 aa9.65□□□□□ -0.86
CDK2AP1-207ENST00000618072 MEIG1Q5JSS6 88 aa9.65□□□□□ -0.86
CDK2AP1-207ENST00000618072 MYMXA0A1B0GTQ4 84 aa9.64□□□□□ -0.87
CDK2AP1-207ENST00000618072 KRTAP10-6P60371 365 aaPredicted RBP9.64□□□□□ -0.87
CDK2AP1-207ENST00000618072 KRTDAPP60985 99 aa9.64□□□□□ -0.87
CDK2AP1-207ENST00000618072 HERV-K104P63124 156 aa9.64□□□□□ -0.87
CDK2AP1-207ENST00000618072 PET117Q6UWS5 81 aa9.64□□□□□ -0.87
CDK2AP1-207ENST00000618072 MIR7-3HGQ8N6C7 128 aa9.64□□□□□ -0.87
CDK2AP1-207ENST00000618072 J3QQQ9 107 aa9.63□□□□□ -0.87
CDK2AP1-207ENST00000618072 LINC01545Q5VT33 79 aa9.63□□□□□ -0.87
CDK2AP1-207ENST00000618072 SSBP3-AS1Q7Z2R9 100 aa9.63□□□□□ -0.87
CDK2AP1-207ENST00000618072 B5MCH6 92 aa9.62□□□□□ -0.87
CDK2AP1-207ENST00000618072 LGALS3P17931 250 aaKnown RBP9.62□□□□□ -0.87
CDK2AP1-207ENST00000618072 RPS29P62273 56 aaKnown RBP9.6□□□□□ -0.87
CDK2AP1-207ENST00000618072 KRTAP19-2Q3LHN2 52 aa9.6□□□□□ -0.87
CDK2AP1-207ENST00000618072 LINC00587B1AMM8 73 aa9.59□□□□□ -0.87
CDK2AP1-207ENST00000618072 E9PLD3 99 aa9.59□□□□□ -0.87
CDK2AP1-207ENST00000618072 S100A12P80511 92 aa9.59□□□□□ -0.87
CDK2AP1-207ENST00000618072 C9orf153Q5TBE3 101 aa9.59□□□□□ -0.87
CDK2AP1-207ENST00000618072 PCOTHQ58A44 107 aa9.58□□□□□ -0.88
CDK2AP1-207ENST00000618072 Q9BRP9 147 aa9.58□□□□□ -0.88
CDK2AP1-207ENST00000618072 IGLV8-61A0A075B6I0 122 aa9.57□□□□□ -0.88
CDK2AP1-207ENST00000618072 NMUP48645 174 aa9.57□□□□□ -0.88
CDK2AP1-207ENST00000618072 DDTP30046 118 aa9.56□□□□□ -0.88
CDK2AP1-207ENST00000618072 HIST3H2BBQ8N257 126 aa9.56□□□□□ -0.88
CDK2AP1-207ENST00000618072 C9orf92A6NGG3 77 aa9.55□□□□□ -0.88
CDK2AP1-207ENST00000618072 S100A6P06703 90 aa9.54□□□□□ -0.88
CDK2AP1-207ENST00000618072 S100A2P29034 98 aa9.54□□□□□ -0.88
CDK2AP1-207ENST00000618072 ATOH7Q8N100 152 aa9.54□□□□□ -0.88
CDK2AP1-207ENST00000618072 A0A0J9YXY3 114 aa9.53□□□□□ -0.88
CDK2AP1-207ENST00000618072 C20orf202A1L168 122 aa9.53□□□□□ -0.88
CDK2AP1-207ENST00000618072 HRCT1Q6UXD1 115 aa9.53□□□□□ -0.88
CDK2AP1-207ENST00000618072 HIST1H2BLQ99880 126 aa9.53□□□□□ -0.88
CDK2AP1-207ENST00000618072 ADAMTSL4-AS1Q5T5F5 129 aa9.52□□□□□ -0.89
CDK2AP1-207ENST00000618072 Q6ZRX8 168 aa9.52□□□□□ -0.89
CDK2AP1-207ENST00000618072 ST20-AS1Q8NBB2 130 aa9.52□□□□□ -0.89
CDK2AP1-207ENST00000618072 TTTY13Q9BZ97 58 aa9.52□□□□□ -0.89
CDK2AP1-207ENST00000618072 SNRPEP62304 92 aaKnown RBP9.51□□□□□ -0.89
CDK2AP1-207ENST00000618072 SSPOA2VEC9 5147 aa9.51□□□□□ -0.89
CDK2AP1-207ENST00000618072 NPC2P61916 151 aa9.5□□□□□ -0.89
CDK2AP1-207ENST00000618072 ZNF815PA8K554 130 aa9.49□□□□□ -0.89
CDK2AP1-207ENST00000618072 ANKRD39Q53RE8 183 aa9.49□□□□□ -0.89
CDK2AP1-207ENST00000618072 USH2AO75445 5202 aa9.48□□□□□ -0.89
CDK2AP1-207ENST00000618072 LOC107984156A0A0G2JMH3 177 aa9.48□□□□□ -0.89
CDK2AP1-207ENST00000618072 S100A7L2Q5SY68 101 aa9.48□□□□□ -0.89
CDK2AP1-207ENST00000618072 ARL17AQ8IVW1 177 aa9.48□□□□□ -0.89
CDK2AP1-207ENST00000618072 M0R2T5 61 aa9.47□□□□□ -0.89
CDK2AP1-207ENST00000618072 EIF4EBP3O60516 100 aaPredicted RBP9.47□□□□□ -0.89
CDK2AP1-207ENST00000618072 SOSTDC1Q6X4U4 206 aa9.47□□□□□ -0.89
CDK2AP1-207ENST00000618072 MIEN1Q9BRT3 115 aa9.47□□□□□ -0.89
CDK2AP1-207ENST00000618072 TRBV10-2A0A0K0K1G8 114 aa9.46□□□□□ -0.9
CDK2AP1-207ENST00000618072 LOC100996750A0A140TA64 210 aa9.46□□□□□ -0.9
CDK2AP1-207ENST00000618072 KRTAP4-6Q9BYQ5 205 aa9.46□□□□□ -0.9
CDK2AP1-207ENST00000618072 C5orf52A6NGY3 159 aa9.45□□□□□ -0.9
CDK2AP1-207ENST00000618072 JOSD1Q15040 202 aaPredicted RBP9.45□□□□□ -0.9
CDK2AP1-207ENST00000618072 LITAFQ99732 161 aa9.45□□□□□ -0.9
CDK2AP1-207ENST00000618072 TRAV23DV6A0A075B6W5 121 aa9.44□□□□□ -0.9
CDK2AP1-207ENST00000618072 SPANXB1Q9NS25 103 aaPredicted RBP9.44□□□□□ -0.9
CDK2AP1-207ENST00000618072 FCGBPQ9Y6R7 5405 aaPredicted RBP9.44□□□□□ -0.9
CDK2AP1-207ENST00000618072 TIMM17BO60830 172 aa9.43□□□□□ -0.9
CDK2AP1-207ENST00000618072 IGLV6-57P01721 117 aa9.43□□□□□ -0.9
CDK2AP1-207ENST00000618072 AKR1D1P51857 326 aa9.43□□□□□ -0.9
CDK2AP1-207ENST00000618072 PCP2Q8IVA1 136 aa9.42□□□□□ -0.9
CDK2AP1-207ENST00000618072 LINC00308Q8TCZ7 52 aa9.42□□□□□ -0.9
CDK2AP1-207ENST00000618072 FLGP20930 4061 aaPredicted RBP9.41□□□□□ -0.9
CDK2AP1-207ENST00000618072 ZNF73O43830 326 aaPredicted RBP9.41□□□□□ -0.9
CDK2AP1-207ENST00000618072 NDUFC2O95298 119 aa9.41□□□□□ -0.9
CDK2AP1-207ENST00000618072 SCGB1D4Q6XE38 83 aa9.41□□□□□ -0.9
CDK2AP1-207ENST00000618072 LIMD2Q9BT23 127 aa9.41□□□□□ -0.9
CDK2AP1-207ENST00000618072 SCGB1D1O95968 90 aa9.4□□□□□ -0.9
CDK2AP1-207ENST00000618072 HSBP1L1C9JCN9 74 aa9.38□□□□□ -0.91
CDK2AP1-207ENST00000618072 H7C2G1 150 aa9.38□□□□□ -0.91
CDK2AP1-207ENST00000618072 COX6B2Q6YFQ2 88 aa9.38□□□□□ -0.91
CDK2AP1-207ENST00000618072 SYNE2Q8WXH0 6885 aaKnown RBP9.36□□□□□ -0.91
CDK2AP1-207ENST00000618072 GHRHP01286 108 aa9.35□□□□□ -0.91
CDK2AP1-207ENST00000618072 HINT1P49773 126 aaPredicted RBP9.35□□□□□ -0.91
CDK2AP1-207ENST00000618072 OR13C6PQ8NH95 151 aa9.35□□□□□ -0.91
CDK2AP1-207ENST00000618072 SPANXDQ9BXN6 97 aa9.35□□□□□ -0.91
CDK2AP1-207ENST00000618072 SPANXCQ9NY87 97 aa9.35□□□□□ -0.91
CDK2AP1-207ENST00000618072 DEFB105AQ8NG35 78 aa9.34□□□□□ -0.91
CDK2AP1-207ENST00000618072 LAMTOR3Q9UHA4 124 aa9.34□□□□□ -0.91
CDK2AP1-207ENST00000618072 MACF1Q9UPN3 7388 aaKnown RBP9.33□□□□□ -0.92
CDK2AP1-207ENST00000618072 MUSTN1Q8IVN3 82 aa9.33□□□□□ -0.92
CDK2AP1-207ENST00000618072 Q1RN00 199 aa9.32□□□□□ -0.92
CDK2AP1-207ENST00000618072 SLC25A34Q6PIV7 304 aa9.32□□□□□ -0.92
CDK2AP1-207ENST00000618072 SPRR1BP22528 89 aa9.31□□□□□ -0.92
CDK2AP1-207ENST00000618072 IFITM1P13164 125 aa9.3□□□□□ -0.92
CDK2AP1-207ENST00000618072 TAL2Q16559 108 aa9.29□□□□□ -0.92
CDK2AP1-207ENST00000618072 Q6ZVH6 145 aa9.29□□□□□ -0.92
CDK2AP1-207ENST00000618072 LINC00518Q8N0U6 118 aa9.29□□□□□ -0.92
CDK2AP1-207ENST00000618072 A0A0G2JQZ4 141 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms