RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 SPINK7P58062 85 aa4.91□□□□□ -1.62
PDE6A-205ENST00000617647 TACC2O95359 2948 aa4.91□□□□□ -1.62
PDE6A-205ENST00000617647 C11orf71Q6IPW1 123 aa4.9□□□□□ -1.62
PDE6A-205ENST00000617647 Q8NDZ9 215 aa4.9□□□□□ -1.62
PDE6A-205ENST00000617647 FAM229AH3BQW9 127 aa4.9□□□□□ -1.63
PDE6A-205ENST00000617647 A0A1B0GW54 56 aa4.89□□□□□ -1.63
PDE6A-205ENST00000617647 C6orf48Q9UBA6 75 aa4.89□□□□□ -1.63
PDE6A-205ENST00000617647 LAMA5O15230 3695 aa4.89□□□□□ -1.63
PDE6A-205ENST00000617647 ZFHX2Q9C0A1 2572 aaPredicted RBP4.89□□□□□ -1.63
PDE6A-205ENST00000617647 ZZEF1O43149 2961 aa4.89□□□□□ -1.63
PDE6A-205ENST00000617647 A0A1W2PNM2 257 aa4.88□□□□□ -1.63
PDE6A-205ENST00000617647 ZCCHC13Q8WW36 166 aaKnown RBP4.88□□□□□ -1.63
PDE6A-205ENST00000617647 A0A1B0GU69 56 aa4.88□□□□□ -1.63
PDE6A-205ENST00000617647 DSCR10P59022 87 aa4.88□□□□□ -1.63
PDE6A-205ENST00000617647 KCNQ1DNQ9H478 68 aa4.88□□□□□ -1.63
PDE6A-205ENST00000617647 ANKRD11Q6UB99 2663 aaPredicted RBP4.87□□□□□ -1.63
PDE6A-205ENST00000617647 EGFEM1PQ0D2K5 195 aa4.87□□□□□ -1.63
PDE6A-205ENST00000617647 ADM2Q7Z4H4 148 aa4.87□□□□□ -1.63
PDE6A-205ENST00000617647 Q8N377 158 aa4.87□□□□□ -1.63
PDE6A-205ENST00000617647 DCHS1Q96JQ0 3298 aa4.87□□□□□ -1.63
PDE6A-205ENST00000617647 C4orf3Q8WVX3 66 aa4.87□□□□□ -1.63
PDE6A-205ENST00000617647 C7orf33Q8WU49 177 aa4.87□□□□□ -1.63
PDE6A-205ENST00000617647 Q8NAQ8 132 aa4.86□□□□□ -1.63
PDE6A-205ENST00000617647 LINC01558Q9Y6Z2 57 aa4.86□□□□□ -1.63
PDE6A-205ENST00000617647 DMXL2Q8TDJ6 3036 aa4.86□□□□□ -1.63
PDE6A-205ENST00000617647 ZFHX3Q15911 3703 aa4.86□□□□□ -1.63
PDE6A-205ENST00000617647 IGLV1-51P01701 117 aa4.86□□□□□ -1.63
PDE6A-205ENST00000617647 A0A0G2JQZ4 141 aa4.85□□□□□ -1.63
PDE6A-205ENST00000617647 A0A1W2PNN7 141 aa4.85□□□□□ -1.63
PDE6A-205ENST00000617647 CSAG1Q6PB30 78 aa4.85□□□□□ -1.63
PDE6A-205ENST00000617647 MUC6Q6W4X9 2439 aa4.85□□□□□ -1.63
PDE6A-205ENST00000617647 LINC00476Q8WZB0 136 aa4.85□□□□□ -1.63
PDE6A-205ENST00000617647 PLA2G2DQ9UNK4 145 aa4.85□□□□□ -1.63
PDE6A-205ENST00000617647 C1orf134Q5TEV5 83 aa4.84□□□□□ -1.63
PDE6A-205ENST00000617647 BOD1L1Q8NFC6 3051 aa4.84□□□□□ -1.64
PDE6A-205ENST00000617647 ZNF702PQ9H963 129 aa4.84□□□□□ -1.64
PDE6A-205ENST00000617647 ZFYVE26Q68DK2 2539 aa4.84□□□□□ -1.64
PDE6A-205ENST00000617647 USP9XQ93008 2570 aaPredicted RBP4.83□□□□□ -1.64
PDE6A-205ENST00000617647 BAHCC1Q9P281 2608 aa4.83□□□□□ -1.64
PDE6A-205ENST00000617647 DCHS2Q6V1P9 2916 aa4.83□□□□□ -1.64
PDE6A-205ENST00000617647 HIVEP3Q5T1R4 2406 aa4.82□□□□□ -1.64
PDE6A-205ENST00000617647 DEFB135Q30KP9 77 aa4.82□□□□□ -1.64
PDE6A-205ENST00000617647 USP9YO00507 2555 aaPredicted RBP4.82□□□□□ -1.64
PDE6A-205ENST00000617647 DEFB113Q30KQ7 82 aa4.82□□□□□ -1.64
PDE6A-205ENST00000617647 CSMD1Q96PZ7 3565 aa4.82□□□□□ -1.64
PDE6A-205ENST00000617647 IGLV5-48A0A075B6I7 105 aa4.81□□□□□ -1.64
PDE6A-205ENST00000617647 DMXL1Q9Y485 3027 aa4.81□□□□□ -1.64
PDE6A-205ENST00000617647 ZNF292O60281 2723 aa4.81□□□□□ -1.64
PDE6A-205ENST00000617647 LCE6AA0A183 80 aa4.81□□□□□ -1.64
PDE6A-205ENST00000617647 MIR22HGQ0VDD5 57 aa4.81□□□□□ -1.64
PDE6A-205ENST00000617647 LELP1Q5T871 98 aa4.81□□□□□ -1.64
PDE6A-205ENST00000617647 IGLV8-61A0A075B6I0 122 aa4.81□□□□□ -1.64
PDE6A-205ENST00000617647 IGLV7-46A0A075B6I9 117 aa4.81□□□□□ -1.64
PDE6A-205ENST00000617647 A0A1W2PPR1 153 aa4.81□□□□□ -1.64
PDE6A-205ENST00000617647 Q6ZRX8 168 aa4.81□□□□□ -1.64
PDE6A-205ENST00000617647 AKAP13Q12802 2813 aa4.8□□□□□ -1.64
PDE6A-205ENST00000617647 X6R8D5 127 aa4.8□□□□□ -1.64
PDE6A-205ENST00000617647 CEP295Q9C0D2 2601 aa4.8□□□□□ -1.64
PDE6A-205ENST00000617647 IGHV6-1A0A0B4J1U7 121 aa4.79□□□□□ -1.64
PDE6A-205ENST00000617647 UQCR11O14957 56 aa4.79□□□□□ -1.64
PDE6A-205ENST00000617647 SPART-AS1P0CW21 52 aa4.79□□□□□ -1.64
PDE6A-205ENST00000617647 GVQW2A0A096LPI5 108 aaPredicted RBP4.79□□□□□ -1.64
PDE6A-205ENST00000617647 ACACBO00763 2458 aa4.78□□□□□ -1.64
PDE6A-205ENST00000617647 ACYP2P14621 99 aa4.78□□□□□ -1.64
PDE6A-205ENST00000617647 RELNP78509 3460 aa4.78□□□□□ -1.64
PDE6A-205ENST00000617647 TP53AIP1Q9HCN2 124 aa4.78□□□□□ -1.64
PDE6A-205ENST00000617647 IGKV2-24A0A0C4DH68 120 aa4.78□□□□□ -1.64
PDE6A-205ENST00000617647 A8MWP4 228 aa4.78□□□□□ -1.64
PDE6A-205ENST00000617647 Q6YL49 198 aa4.78□□□□□ -1.64
PDE6A-205ENST00000617647 ITPR1Q14643 2758 aa4.77□□□□□ -1.65
PDE6A-205ENST00000617647 PLA2G1BP04054 148 aaKnown RBP4.77□□□□□ -1.65
PDE6A-205ENST00000617647 IGFL1Q6UW32 110 aa4.77□□□□□ -1.65
PDE6A-205ENST00000617647 IGF2RP11717 2491 aa4.77□□□□□ -1.65
PDE6A-205ENST00000617647 PRLHP81277 87 aa4.76□□□□□ -1.65
PDE6A-205ENST00000617647 REG3GQ6UW15 175 aa4.76□□□□□ -1.65
PDE6A-205ENST00000617647 ATMQ13315 3056 aa4.76□□□□□ -1.65
PDE6A-205ENST00000617647 FAM208BQ5VWN6 2430 aa4.76□□□□□ -1.65
PDE6A-205ENST00000617647 FASNP49327 2511 aaKnown RBP4.76□□□□□ -1.65
PDE6A-205ENST00000617647 ADGRG4Q8IZF6 3080 aa4.76□□□□□ -1.65
PDE6A-205ENST00000617647 J3QKU1 62 aa4.75□□□□□ -1.65
PDE6A-205ENST00000617647 SPRR4Q96PI1 79 aa4.75□□□□□ -1.65
PDE6A-205ENST00000617647 CCDC168Q8NDH2 2452 aa4.75□□□□□ -1.65
PDE6A-205ENST00000617647 HRES1P13985 223 aa4.75□□□□□ -1.65
PDE6A-205ENST00000617647 MTORP42345 2549 aa4.74□□□□□ -1.65
PDE6A-205ENST00000617647 HRNRQ86YZ3 2850 aaPredicted RBP4.74□□□□□ -1.65
PDE6A-205ENST00000617647 VPS13CQ709C8 3753 aa4.74□□□□□ -1.65
PDE6A-205ENST00000617647 SPINK6Q6UWN8 80 aa4.74□□□□□ -1.65
PDE6A-205ENST00000617647 C9orf163Q8N9P6 203 aa4.74□□□□□ -1.65
PDE6A-205ENST00000617647 NAV2Q8IVL1 2488 aa4.74□□□□□ -1.65
PDE6A-205ENST00000617647 IGLV1-50A0A075B6I6 118 aa4.73□□□□□ -1.65
PDE6A-205ENST00000617647 SVEP1Q4LDE5 3571 aa4.73□□□□□ -1.65
PDE6A-205ENST00000617647 K7ERS5 55 aa4.72□□□□□ -1.65
PDE6A-205ENST00000617647 IGLV9-49A0A0B4J1Y8 123 aa4.72□□□□□ -1.65
PDE6A-205ENST00000617647 SPINK1P00995 79 aa4.72□□□□□ -1.65
PDE6A-205ENST00000617647 LORP23490 312 aaPredicted RBP4.72□□□□□ -1.65
PDE6A-205ENST00000617647 SPINT4Q6UDR6 99 aa4.72□□□□□ -1.65
PDE6A-205ENST00000617647 MAP1AP78559 2803 aaPredicted RBP4.72□□□□□ -1.65
PDE6A-205ENST00000617647 HIVEP2P31629 2446 aa4.72□□□□□ -1.65
PDE6A-205ENST00000617647 FAM168BA1KXE4 195 aa4.71□□□□□ -1.65
PDE6A-205ENST00000617647 CNBPP62633 177 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms