RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 IGLV5-37A0A075B6J1 123 aa11.14□□□□□ -0.63
PCDHGC3-205ENST00000617641 FAM19A5Q7Z5A7 132 aaPredicted RBP11.14□□□□□ -0.63
PCDHGC3-205ENST00000617641 KCNQ1DNQ9H478 68 aa11.14□□□□□ -0.63
PCDHGC3-205ENST00000617641 RPL37AP8A6NKH3 93 aa11.13□□□□□ -0.63
PCDHGC3-205ENST00000617641 M0R2N4 97 aa11.13□□□□□ -0.63
PCDHGC3-205ENST00000617641 GAGE2AQ6NT46 116 aa11.13□□□□□ -0.63
PCDHGC3-205ENST00000617641 C14orf177Q52M58 125 aa11.12□□□□□ -0.63
PCDHGC3-205ENST00000617641 A0A096LNI7 61 aa11.12□□□□□ -0.63
PCDHGC3-205ENST00000617641 LRCOL1A6NCL2 159 aa11.12□□□□□ -0.63
PCDHGC3-205ENST00000617641 Q6ZRN7 208 aaPredicted RBP11.12□□□□□ -0.63
PCDHGC3-205ENST00000617641 LINC00528Q8N1L1 170 aa11.12□□□□□ -0.63
PCDHGC3-205ENST00000617641 KRTAP21-3Q3LHN1 58 aa11.11□□□□□ -0.63
PCDHGC3-205ENST00000617641 J3KT08 172 aa11.1□□□□□ -0.63
PCDHGC3-205ENST00000617641 IGKV2-24A0A0C4DH68 120 aa11.1□□□□□ -0.63
PCDHGC3-205ENST00000617641 ACYP1P07311 99 aa11.1□□□□□ -0.63
PCDHGC3-205ENST00000617641 IGLV1-50A0A075B6I6 118 aa11.09□□□□□ -0.63
PCDHGC3-205ENST00000617641 MRPL55Q7Z7F7 128 aaKnown RBP11.09□□□□□ -0.63
PCDHGC3-205ENST00000617641 C16orf90A8MZG2 172 aa11.08□□□□□ -0.64
PCDHGC3-205ENST00000617641 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.08□□□□□ -0.64
PCDHGC3-205ENST00000617641 FBN3Q75N90 2809 aa11.08□□□□□ -0.64
PCDHGC3-205ENST00000617641 JMJD7-PLA2G4BH0Y9G9 81 aa11.08□□□□□ -0.64
PCDHGC3-205ENST00000617641 PRYO14603 147 aa11.06□□□□□ -0.64
PCDHGC3-205ENST00000617641 SMCR5Q8TEV8 140 aa11.06□□□□□ -0.64
PCDHGC3-205ENST00000617641 LAMTOR3Q9UHA4 124 aa11.06□□□□□ -0.64
PCDHGC3-205ENST00000617641 A0A1W2PNN7 141 aa11.04□□□□□ -0.64
PCDHGC3-205ENST00000617641 KRTAP4-16G5E9R7 235 aaPredicted RBP11.03□□□□□ -0.64
PCDHGC3-205ENST00000617641 CHTF8P0CG12 524 aa11.03□□□□□ -0.64
PCDHGC3-205ENST00000617641 SPRR1AP35321 89 aa11.03□□□□□ -0.64
PCDHGC3-205ENST00000617641 H3BQ85 93 aa11.02□□□□□ -0.64
PCDHGC3-205ENST00000617641 CCKP06307 115 aa11.02□□□□□ -0.64
PCDHGC3-205ENST00000617641 C9orf163Q8N9P6 203 aa11.02□□□□□ -0.64
PCDHGC3-205ENST00000617641 ETDCA0A1B0GVM5 59 aa11.01□□□□□ -0.65
PCDHGC3-205ENST00000617641 RPS28P62857 69 aaKnown RBP11.01□□□□□ -0.65
PCDHGC3-205ENST00000617641 Q6ZRX8 168 aa11.01□□□□□ -0.65
PCDHGC3-205ENST00000617641 KMT2AQ03164 3969 aa11.01□□□□□ -0.65
PCDHGC3-205ENST00000617641 RBM3P98179 157 aaKnown RBP11.01□□□□□ -0.65
PCDHGC3-205ENST00000617641 SDIM1Q6ZPB5 146 aa11.01□□□□□ -0.65
PCDHGC3-205ENST00000617641 Q6ZR54 194 aa11□□□□□ -0.65
PCDHGC3-205ENST00000617641 Q9BRP9 147 aa11□□□□□ -0.65
PCDHGC3-205ENST00000617641 LINC00846Q9NV44 126 aa10.99□□□□□ -0.65
PCDHGC3-205ENST00000617641 GHRHP01286 108 aa10.98□□□□□ -0.65
PCDHGC3-205ENST00000617641 C9orf153Q5TBE3 101 aa10.98□□□□□ -0.65
PCDHGC3-205ENST00000617641 REG3GQ6UW15 175 aa10.97□□□□□ -0.65
PCDHGC3-205ENST00000617641 LINC00643Q86TS7 51 aa10.97□□□□□ -0.65
PCDHGC3-205ENST00000617641 DHRS4-AS1Q9P1J3 65 aa10.97□□□□□ -0.65
PCDHGC3-205ENST00000617641 A0A087WTM6 91 aa10.96□□□□□ -0.65
PCDHGC3-205ENST00000617641 Q6ZQT0 140 aa10.96□□□□□ -0.65
PCDHGC3-205ENST00000617641 TGP01266 2768 aa10.96□□□□□ -0.66
PCDHGC3-205ENST00000617641 DNAH2Q9P225 4427 aa10.95□□□□□ -0.66
PCDHGC3-205ENST00000617641 LOC110117498A0A087WWA1 95 aa10.95□□□□□ -0.66
PCDHGC3-205ENST00000617641 C3orf22Q8N5N4 141 aa10.95□□□□□ -0.66
PCDHGC3-205ENST00000617641 DEFB105AQ8NG35 78 aa10.95□□□□□ -0.66
PCDHGC3-205ENST00000617641 DSCR8Q96T75 97 aa10.95□□□□□ -0.66
PCDHGC3-205ENST00000617641 LY6G6CO95867 125 aa10.94□□□□□ -0.66
PCDHGC3-205ENST00000617641 FUSP35637 526 aaKnown RBP eCLIP10.94□□□□□ -0.66
PCDHGC3-205ENST00000617641 PANO1I0J062 215 aa10.93□□□□□ -0.66
PCDHGC3-205ENST00000617641 PHF5AQ7RTV0 110 aaKnown RBP10.93□□□□□ -0.66
PCDHGC3-205ENST00000617641 UBE2BP63146 152 aa10.92□□□□□ -0.66
PCDHGC3-205ENST00000617641 Q8N377 158 aa10.92□□□□□ -0.66
PCDHGC3-205ENST00000617641 PKIGQ9Y2B9 76 aa10.92□□□□□ -0.66
PCDHGC3-205ENST00000617641 UQCRQO14949 82 aa10.92□□□□□ -0.66
PCDHGC3-205ENST00000617641 ERC2-IT1O76042 136 aa10.92□□□□□ -0.66
PCDHGC3-205ENST00000617641 LINC01547P58512 204 aaPredicted RBP10.92□□□□□ -0.66
PCDHGC3-205ENST00000617641 TRBV7-7A0A0K0K1E9 115 aa10.91□□□□□ -0.66
PCDHGC3-205ENST00000617641 ST20-AS1Q8NBB2 130 aa10.91□□□□□ -0.66
PCDHGC3-205ENST00000617641 KRTAP11-1Q8IUC1 163 aa10.91□□□□□ -0.66
PCDHGC3-205ENST00000617641 WWC2-AS2Q96NR7 200 aa10.91□□□□□ -0.66
PCDHGC3-205ENST00000617641 TRBV7-4A0A0J9YYF1 115 aa10.9□□□□□ -0.67
PCDHGC3-205ENST00000617641 LINC00474Q9P2X8 69 aa10.9□□□□□ -0.67
PCDHGC3-205ENST00000617641 C1orf134Q5TEV5 83 aa10.89□□□□□ -0.67
PCDHGC3-205ENST00000617641 FAM19A1Q7Z5A9 133 aa10.89□□□□□ -0.67
PCDHGC3-205ENST00000617641 HECTD4Q9Y4D8 3996 aa10.88□□□□□ -0.67
PCDHGC3-205ENST00000617641 PRLHP81277 87 aa10.88□□□□□ -0.67
PCDHGC3-205ENST00000617641 PDE6GP18545 87 aa10.87□□□□□ -0.67
PCDHGC3-205ENST00000617641 DPH3Q96FX2 82 aa10.87□□□□□ -0.67
PCDHGC3-205ENST00000617641 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.87□□□□□ -0.67
PCDHGC3-205ENST00000617641 DNAH6Q9C0G6 4158 aa10.87□□□□□ -0.67
PCDHGC3-205ENST00000617641 LINC00476Q8WZB0 136 aa10.87□□□□□ -0.67
PCDHGC3-205ENST00000617641 RTL8CO15255 209 aa10.86□□□□□ -0.67
PCDHGC3-205ENST00000617641 C4orf26Q17RF5 130 aa10.86□□□□□ -0.67
PCDHGC3-205ENST00000617641 DNAH17Q9UFH2 4485 aa10.86□□□□□ -0.67
PCDHGC3-205ENST00000617641 IGKV3D-7A0A0C4DH55 119 aa10.85□□□□□ -0.67
PCDHGC3-205ENST00000617641 FAM236AA0A1B0GUQ0 79 aa10.85□□□□□ -0.67
PCDHGC3-205ENST00000617641 FAM236BA0A1B0GV22 79 aa10.85□□□□□ -0.67
PCDHGC3-205ENST00000617641 HRCT1Q6UXD1 115 aa10.85□□□□□ -0.67
PCDHGC3-205ENST00000617641 SPACA4Q8TDM5 124 aa10.85□□□□□ -0.67
PCDHGC3-205ENST00000617641 IGLV5-48A0A075B6I7 105 aa10.85□□□□□ -0.67
PCDHGC3-205ENST00000617641 Q6JHZ5 121 aa10.85□□□□□ -0.67
PCDHGC3-205ENST00000617641 IMUPQ9GZP8 106 aa10.84□□□□□ -0.67
PCDHGC3-205ENST00000617641 SEC61GP60059 68 aa10.84□□□□□ -0.67
PCDHGC3-205ENST00000617641 ALMS1Q8TCU4 4167 aa10.82□□□□□ -0.68
PCDHGC3-205ENST00000617641 HIGD2AQ9BW72 106 aa10.82□□□□□ -0.68
PCDHGC3-205ENST00000617641 UBL5Q9BZL1 73 aa10.82□□□□□ -0.68
PCDHGC3-205ENST00000617641 Q5XG85 94 aa10.81□□□□□ -0.68
PCDHGC3-205ENST00000617641 PRO0628Q9UI54 55 aa10.81□□□□□ -0.68
PCDHGC3-205ENST00000617641 CRYGAP11844 174 aa10.8□□□□□ -0.68
PCDHGC3-205ENST00000617641 IGLV5-52A0A0A0MRZ9 124 aa10.79□□□□□ -0.68
PCDHGC3-205ENST00000617641 EPM2AB3EWF7 344 aa10.79□□□□□ -0.68
PCDHGC3-205ENST00000617641 TNP2Q05952 138 aa10.79□□□□□ -0.68
PCDHGC3-205ENST00000617641 COX7CP15954 63 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms