RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 ASXL3Q9C0F0 2248 aa1.23□□□□□ -2.21
NEAT1-205ENST00000616315 HELZ2Q9BYK8 2649 aaKnown RBP1.22□□□□□ -2.21
NEAT1-205ENST00000616315 CACNA1EQ15878 2313 aa1.22□□□□□ -2.21
NEAT1-205ENST00000616315 PDE4DIPQ5VU43 2346 aa1.22□□□□□ -2.21
NEAT1-205ENST00000616315 JMJD1CQ15652 2540 aa1.22□□□□□ -2.21
NEAT1-205ENST00000616315 SPINK4O60575 86 aa1.22□□□□□ -2.21
NEAT1-205ENST00000616315 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.22□□□□□ -2.21
NEAT1-205ENST00000616315 Q6ZQY7 126 aa1.22□□□□□ -2.21
NEAT1-205ENST00000616315 CCL19Q99731 98 aa1.22□□□□□ -2.21
NEAT1-205ENST00000616315 TIMM8BQ9Y5J9 83 aaPredicted RBP1.22□□□□□ -2.21
NEAT1-205ENST00000616315 TECTAO75443 2155 aa1.21□□□□□ -2.22
NEAT1-205ENST00000616315 NAV3Q8IVL0 2385 aa1.21□□□□□ -2.22
NEAT1-205ENST00000616315 ETDCA0A1B0GVM5 59 aa1.21□□□□□ -2.22
NEAT1-205ENST00000616315 NCR3O14931 201 aa1.21□□□□□ -2.22
NEAT1-205ENST00000616315 LY6G6CO95867 125 aa1.21□□□□□ -2.22
NEAT1-205ENST00000616315 AHCTF1Q8WYP5 2266 aa1.2□□□□□ -2.22
NEAT1-205ENST00000616315 KNTC1P50748 2209 aa1.2□□□□□ -2.22
NEAT1-205ENST00000616315 ASCC3Q8N3C0 2202 aaKnown RBP1.2□□□□□ -2.22
NEAT1-205ENST00000616315 A0A096LNT2 108 aa1.2□□□□□ -2.22
NEAT1-205ENST00000616315 FXYD6P3P58550 94 aa1.2□□□□□ -2.22
NEAT1-205ENST00000616315 SMIM11BQ8TCY0 68 aa1.2□□□□□ -2.22
NEAT1-205ENST00000616315 PTPRQQ9UMZ3 2332 aa1.2□□□□□ -2.22
NEAT1-205ENST00000616315 DOPEY2Q9Y3R5 2298 aa1.19□□□□□ -2.22
NEAT1-205ENST00000616315 FAM208BQ5VWN6 2430 aa1.19□□□□□ -2.22
NEAT1-205ENST00000616315 GVQW2A0A096LPI5 108 aaPredicted RBP1.19□□□□□ -2.22
NEAT1-205ENST00000616315 RPL38P63173 70 aaKnown RBP1.19□□□□□ -2.22
NEAT1-205ENST00000616315 C10orf99Q6UWK7 81 aa1.19□□□□□ -2.22
NEAT1-205ENST00000616315 ALMS1Q8TCU4 4167 aa1.19□□□□□ -2.22
NEAT1-205ENST00000616315 CPSF4LA6NMK7 179 aaKnown RBP1.18□□□□□ -2.22
NEAT1-205ENST00000616315 NDUFA3O95167 84 aa1.18□□□□□ -2.22
NEAT1-205ENST00000616315 HAMPP81172 84 aa1.18□□□□□ -2.22
NEAT1-205ENST00000616315 Q6ZRX8 168 aa1.18□□□□□ -2.22
NEAT1-205ENST00000616315 SSBP3-AS1Q7Z2R9 100 aa1.18□□□□□ -2.22
NEAT1-205ENST00000616315 IGF2RP11717 2491 aa1.17□□□□□ -2.22
NEAT1-205ENST00000616315 COL6A6A6NMZ7 2263 aa1.17□□□□□ -2.22
NEAT1-205ENST00000616315 TMEM167BQ9NRX6 74 aa1.17□□□□□ -2.22
NEAT1-205ENST00000616315 FLG2Q5D862 2391 aaPredicted RBP1.16□□□□□ -2.22
NEAT1-205ENST00000616315 REV3LO60673 3130 aa1.16□□□□□ -2.22
NEAT1-205ENST00000616315 KNL1Q8NG31 2342 aa1.16□□□□□ -2.22
NEAT1-205ENST00000616315 DEFB131BA0A096LNP1 70 aa1.16□□□□□ -2.22
NEAT1-205ENST00000616315 SPTY2D1-AS1A0A0U1RR47 76 aa1.16□□□□□ -2.22
NEAT1-205ENST00000616315 H0YGX0 51 aa1.16□□□□□ -2.22
NEAT1-205ENST00000616315 MRPL33O75394 65 aaKnown RBP1.16□□□□□ -2.22
NEAT1-205ENST00000616315 PLAC4Q8WY50 150 aa1.16□□□□□ -2.22
NEAT1-205ENST00000616315 PIN1P1O15428 100 aa1.15□□□□□ -2.23
NEAT1-205ENST00000616315 LINC00575Q6W349 94 aa1.15□□□□□ -2.23
NEAT1-205ENST00000616315 RPL37P61927 97 aaKnown RBP1.14□□□□□ -2.23
NEAT1-205ENST00000616315 TPRP12270 2363 aaKnown RBP1.13□□□□□ -2.23
NEAT1-205ENST00000616315 TENM1Q9UKZ4 2725 aa1.13□□□□□ -2.23
NEAT1-205ENST00000616315 TFF3Q07654 80 aa1.13□□□□□ -2.23
NEAT1-205ENST00000616315 SMIM2Q9BVW6 85 aa1.13□□□□□ -2.23
NEAT1-205ENST00000616315 ZNF462Q96JM2 2506 aa1.12□□□□□ -2.23
NEAT1-205ENST00000616315 LOC730098B7Z3J9 87 aa1.12□□□□□ -2.23
NEAT1-205ENST00000616315 CRIP1P50238 77 aa1.12□□□□□ -2.23
NEAT1-205ENST00000616315 LINC00158P58513 81 aa1.12□□□□□ -2.23
NEAT1-205ENST00000616315 SPINK13Q1W4C9 94 aa1.12□□□□□ -2.23
NEAT1-205ENST00000616315 RPS27LQ71UM5 84 aaKnown RBP1.12□□□□□ -2.23
NEAT1-205ENST00000616315 Q8IZM0 81 aa1.12□□□□□ -2.23
NEAT1-205ENST00000616315 CNFNQ9BYD5 112 aa1.12□□□□□ -2.23
NEAT1-205ENST00000616315 PRO3102Q9H379 93 aa1.12□□□□□ -2.23
NEAT1-205ENST00000616315 PLCE1Q9P212 2302 aa1.12□□□□□ -2.23
NEAT1-205ENST00000616315 I3L2K1 104 aa1.11□□□□□ -2.23
NEAT1-205ENST00000616315 NDUFA1O15239 70 aa1.11□□□□□ -2.23
NEAT1-205ENST00000616315 UBE2DNLQ8IWF7 75 aa1.11□□□□□ -2.23
NEAT1-205ENST00000616315 LINC00308Q8TCZ7 52 aa1.11□□□□□ -2.23
NEAT1-205ENST00000616315 CNTRLQ7Z7A1 2325 aa1.11□□□□□ -2.23
NEAT1-205ENST00000616315 TRANK1O15050 2925 aa1.11□□□□□ -2.23
NEAT1-205ENST00000616315 A0A0C4DFX4 3053 aa1.1□□□□□ -2.23
NEAT1-205ENST00000616315 PRB3Q04118 309 aaPredicted RBP1.1□□□□□ -2.23
NEAT1-205ENST00000616315 CDKN2A-AS1Q9UH64 79 aa1.1□□□□□ -2.23
NEAT1-205ENST00000616315 H0YAA0 97 aa1.09□□□□□ -2.23
NEAT1-205ENST00000616315 IAPPP10997 89 aa1.09□□□□□ -2.23
NEAT1-205ENST00000616315 CRIPTQ9P021 101 aa1.09□□□□□ -2.23
NEAT1-205ENST00000616315 DSPP15924 2871 aaKnown RBP1.08□□□□□ -2.24
NEAT1-205ENST00000616315 PTPRZ1P23471 2315 aaPredicted RBP1.08□□□□□ -2.24
NEAT1-205ENST00000616315 LYNX1G3V0Z9 82 aa1.08□□□□□ -2.24
NEAT1-205ENST00000616315 K7EQZ3 153 aa1.08□□□□□ -2.24
NEAT1-205ENST00000616315 DEFB106AQ8N104 65 aa1.08□□□□□ -2.24
NEAT1-205ENST00000616315 DEFB123Q8N688 67 aa1.08□□□□□ -2.24
NEAT1-205ENST00000616315 MRPL34Q9BQ48 92 aaKnown RBP1.08□□□□□ -2.24
NEAT1-205ENST00000616315 GVINP1Q7Z2Y8 2422 aa1.07□□□□□ -2.24
NEAT1-205ENST00000616315 CCL22O00626 93 aa1.07□□□□□ -2.24
NEAT1-205ENST00000616315 TP53AIP1Q9HCN2 124 aa1.07□□□□□ -2.24
NEAT1-205ENST00000616315 ROS1P08922 2347 aa1.07□□□□□ -2.24
NEAT1-205ENST00000616315 F8P00451 2351 aa1.06□□□□□ -2.24
NEAT1-205ENST00000616315 COX6B2Q6YFQ2 88 aa1.06□□□□□ -2.24
NEAT1-205ENST00000616315 TTTY10Q9BZA0 68 aa1.06□□□□□ -2.24
NEAT1-205ENST00000616315 POLQO75417 2590 aa1.06□□□□□ -2.24
NEAT1-205ENST00000616315 K7EIL1 84 aa1.05□□□□□ -2.24
NEAT1-205ENST00000616315 MINOS1Q5TGZ0 78 aa1.05□□□□□ -2.24
NEAT1-205ENST00000616315 ARHGAP5-AS1Q96IT6 56 aa1.05□□□□□ -2.24
NEAT1-205ENST00000616315 USMG5Q96IX5 58 aa1.05□□□□□ -2.24
NEAT1-205ENST00000616315 C10orf95Q9H7T3 257 aa1.05□□□□□ -2.24
NEAT1-205ENST00000616315 C6orf48Q9UBA6 75 aa1.05□□□□□ -2.24
NEAT1-205ENST00000616315 C2CD3Q4AC94 2353 aa1.05□□□□□ -2.24
NEAT1-205ENST00000616315 ASH1LQ9NR48 2969 aaKnown RBP1.05□□□□□ -2.24
NEAT1-205ENST00000616315 ZNF292O60281 2723 aa1.04□□□□□ -2.24
NEAT1-205ENST00000616315 H3BSH0 61 aa1.04□□□□□ -2.24
NEAT1-205ENST00000616315 CEP290O15078 2479 aa1.04□□□□□ -2.24
NEAT1-205ENST00000616315 CELSR2Q9HCU4 2923 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms