RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 FAT3Q8TDW7 4589 aa6.95□□□□□ -1.3
COL4A1-205ENST00000615732 H0YGX0 51 aa6.94□□□□□ -1.3
COL4A1-205ENST00000615732 SLC25A20O43772 301 aa6.94□□□□□ -1.3
COL4A1-205ENST00000615732 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.92□□□□□ -1.3
COL4A1-205ENST00000615732 TLX1NBP0CAT3 122 aa6.92□□□□□ -1.3
COL4A1-205ENST00000615732 OCIAD2Q56VL3 154 aa6.92□□□□□ -1.3
COL4A1-205ENST00000615732 Q6ZRP5 223 aa6.92□□□□□ -1.3
COL4A1-205ENST00000615732 Q8NDZ9 215 aa6.92□□□□□ -1.3
COL4A1-205ENST00000615732 LOC107984640A0A0U1RRK4 108 aa6.91□□□□□ -1.3
COL4A1-205ENST00000615732 H3BT86 120 aa6.91□□□□□ -1.3
COL4A1-205ENST00000615732 K7ERU9 68 aa6.91□□□□□ -1.3
COL4A1-205ENST00000615732 M0QXV9 152 aa6.91□□□□□ -1.3
COL4A1-205ENST00000615732 M0R378 163 aa6.91□□□□□ -1.3
COL4A1-205ENST00000615732 DNAL4O96015 105 aa6.91□□□□□ -1.3
COL4A1-205ENST00000615732 TRACP01848 142 aa6.91□□□□□ -1.3
COL4A1-205ENST00000615732 VPREB1P12018 145 aa6.91□□□□□ -1.3
COL4A1-205ENST00000615732 SMCPP49901 116 aaPredicted RBP6.91□□□□□ -1.3
COL4A1-205ENST00000615732 ETDBQ3ZM63 59 aa6.91□□□□□ -1.3
COL4A1-205ENST00000615732 LINC00528Q8N1L1 170 aa6.91□□□□□ -1.3
COL4A1-205ENST00000615732 ANKRD29Q8N6D5 301 aa6.91□□□□□ -1.3
COL4A1-205ENST00000615732 NKAPP1Q8N9T2 125 aa6.91□□□□□ -1.3
COL4A1-205ENST00000615732 CBY1Q9Y3M2 126 aa6.91□□□□□ -1.3
COL4A1-205ENST00000615732 KRTAP29-1A8MX34 341 aaPredicted RBP6.9□□□□□ -1.3
COL4A1-205ENST00000615732 J3QR89 54 aa6.9□□□□□ -1.3
COL4A1-205ENST00000615732 SLPIP03973 132 aa6.9□□□□□ -1.3
COL4A1-205ENST00000615732 GAGE2BQ13066 116 aa6.9□□□□□ -1.3
COL4A1-205ENST00000615732 SNCGO76070 127 aa6.89□□□□□ -1.31
COL4A1-205ENST00000615732 IGLV6-57P01721 117 aa6.89□□□□□ -1.31
COL4A1-205ENST00000615732 FAM218AQ96MZ4 157 aa6.89□□□□□ -1.31
COL4A1-205ENST00000615732 PKIGQ9Y2B9 76 aa6.89□□□□□ -1.31
COL4A1-205ENST00000615732 PKHD1L1Q86WI1 4243 aa6.89□□□□□ -1.31
COL4A1-205ENST00000615732 TRAV23DV6A0A075B6W5 121 aa6.88□□□□□ -1.31
COL4A1-205ENST00000615732 TRBV10-3A0A0K0K1G6 114 aa6.88□□□□□ -1.31
COL4A1-205ENST00000615732 CNBPP62633 177 aaKnown RBP6.88□□□□□ -1.31
COL4A1-205ENST00000615732 C6orf99Q4VX62 202 aa6.88□□□□□ -1.31
COL4A1-205ENST00000615732 C9orf129Q5T035 196 aaKnown RBP6.88□□□□□ -1.31
COL4A1-205ENST00000615732 Q6ZSA8 131 aa6.88□□□□□ -1.31
COL4A1-205ENST00000615732 TEN1Q86WV5 123 aa6.88□□□□□ -1.31
COL4A1-205ENST00000615732 DIRC1Q969H9 104 aa6.88□□□□□ -1.31
COL4A1-205ENST00000615732 A0A087WYN8 130 aa6.87□□□□□ -1.31
COL4A1-205ENST00000615732 PLA2G1BP04054 148 aaKnown RBP6.87□□□□□ -1.31
COL4A1-205ENST00000615732 SCXQ7RTU7 201 aa6.87□□□□□ -1.31
COL4A1-205ENST00000615732 PPDPFLQ8WWR9 84 aa6.87□□□□□ -1.31
COL4A1-205ENST00000615732 PLA2G2DQ9UNK4 145 aa6.87□□□□□ -1.31
COL4A1-205ENST00000615732 A0A1B0GX51 115 aa6.86□□□□□ -1.31
COL4A1-205ENST00000615732 BAALC-AS2P0C853 105 aa6.85□□□□□ -1.31
COL4A1-205ENST00000615732 LINC01600Q96MT4 127 aa6.85□□□□□ -1.31
COL4A1-205ENST00000615732 ZNF73O43830 326 aaPredicted RBP6.84□□□□□ -1.31
COL4A1-205ENST00000615732 COX7BP24311 80 aa6.84□□□□□ -1.31
COL4A1-205ENST00000615732 SERTAD4-AS1Q5TG53 156 aa6.84□□□□□ -1.31
COL4A1-205ENST00000615732 IGLV5-37A0A075B6J1 123 aa6.83□□□□□ -1.32
COL4A1-205ENST00000615732 FAM19A5Q7Z5A7 132 aaPredicted RBP6.83□□□□□ -1.32
COL4A1-205ENST00000615732 C7orf33Q8WU49 177 aa6.83□□□□□ -1.32
COL4A1-205ENST00000615732 ORMDL1Q9P0S3 153 aa6.83□□□□□ -1.32
COL4A1-205ENST00000615732 IGKV2-24A0A0C4DH68 120 aa6.82□□□□□ -1.32
COL4A1-205ENST00000615732 KRTAP10-4P60372 401 aaPredicted RBP6.82□□□□□ -1.32
COL4A1-205ENST00000615732 LINC00575Q6W349 94 aa6.82□□□□□ -1.32
COL4A1-205ENST00000615732 A0A096LNI7 61 aa6.81□□□□□ -1.32
COL4A1-205ENST00000615732 TRBV7-6A0A0J9YX20 115 aa6.81□□□□□ -1.32
COL4A1-205ENST00000615732 hADV29S1A0JD25 119 aa6.81□□□□□ -1.32
COL4A1-205ENST00000615732 FAM168BA1KXE4 195 aa6.81□□□□□ -1.32
COL4A1-205ENST00000615732 PRYO14603 147 aa6.81□□□□□ -1.32
COL4A1-205ENST00000615732 CIRBP-AS1Q8TBR5 109 aa6.81□□□□□ -1.32
COL4A1-205ENST00000615732 VPS25Q9BRG1 176 aa6.81□□□□□ -1.32
COL4A1-205ENST00000615732 MRPL55Q7Z7F7 128 aaKnown RBP6.8□□□□□ -1.32
COL4A1-205ENST00000615732 LINC00167Q96N53 147 aa6.8□□□□□ -1.32
COL4A1-205ENST00000615732 C22orf24Q9Y442 160 aa6.8□□□□□ -1.32
COL4A1-205ENST00000615732 TEX49A0A1B0GTD5 131 aa6.79□□□□□ -1.32
COL4A1-205ENST00000615732 ELOF1P60002 83 aaKnown RBP6.79□□□□□ -1.32
COL4A1-205ENST00000615732 C9orf163Q8N9P6 203 aa6.79□□□□□ -1.32
COL4A1-205ENST00000615732 KCNQ1DNQ9H478 68 aa6.79□□□□□ -1.32
COL4A1-205ENST00000615732 RNF213Q63HN8 5207 aa6.79□□□□□ -1.32
COL4A1-205ENST00000615732 RPL37AP8A6NKH3 93 aa6.78□□□□□ -1.32
COL4A1-205ENST00000615732 H3BQ85 93 aa6.78□□□□□ -1.32
COL4A1-205ENST00000615732 LINC00474Q9P2X8 69 aa6.78□□□□□ -1.32
COL4A1-205ENST00000615732 ETDCA0A1B0GVM5 59 aa6.77□□□□□ -1.33
COL4A1-205ENST00000615732 OXTP01178 125 aa6.77□□□□□ -1.33
COL4A1-205ENST00000615732 GHRHP01286 108 aa6.77□□□□□ -1.33
COL4A1-205ENST00000615732 IGLV1-50A0A075B6I6 118 aa6.76□□□□□ -1.33
COL4A1-205ENST00000615732 TMEM256-PLSCR3K7ERE1 68 aa6.76□□□□□ -1.33
COL4A1-205ENST00000615732 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.76□□□□□ -1.33
COL4A1-205ENST00000615732 CHTF8P0CG12 524 aa6.75□□□□□ -1.33
COL4A1-205ENST00000615732 RPL37AP61513 92 aaKnown RBP6.75□□□□□ -1.33
COL4A1-205ENST00000615732 Q6ZQY7 126 aa6.75□□□□□ -1.33
COL4A1-205ENST00000615732 KRTAP7-1Q8IUC3 87 aa6.75□□□□□ -1.33
COL4A1-205ENST00000615732 A0A1W2PNN7 141 aa6.74□□□□□ -1.33
COL4A1-205ENST00000615732 UBE2BP63146 152 aa6.74□□□□□ -1.33
COL4A1-205ENST00000615732 DPH3Q96FX2 82 aa6.74□□□□□ -1.33
COL4A1-205ENST00000615732 PANO1I0J062 215 aa6.73□□□□□ -1.33
COL4A1-205ENST00000615732 REG3GQ6UW15 175 aa6.73□□□□□ -1.33
COL4A1-205ENST00000615732 SDIM1Q6ZPB5 146 aa6.73□□□□□ -1.33
COL4A1-205ENST00000615732 DHRS4-AS1Q9P1J3 65 aa6.73□□□□□ -1.33
COL4A1-205ENST00000615732 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.73□□□□□ -1.33
COL4A1-205ENST00000615732 LRP2P98164 4655 aa6.73□□□□□ -1.33
COL4A1-205ENST00000615732 TNXBP22105 4242 aa6.72□□□□□ -1.33
COL4A1-205ENST00000615732 JMJD7-PLA2G4BH0Y9G9 81 aa6.72□□□□□ -1.33
COL4A1-205ENST00000615732 SPRR1AP35321 89 aa6.72□□□□□ -1.33
COL4A1-205ENST00000615732 LAMTOR3Q9UHA4 124 aa6.72□□□□□ -1.33
COL4A1-205ENST00000615732 A0A1B0GV72 72 aa6.71□□□□□ -1.34
COL4A1-205ENST00000615732 B5MCH6 92 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms