RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 Q6ZQT0 140 aa12.44□□□□□ -0.42
MMP28-204ENST00000615136 UBE2DNLQ8IWF7 75 aa12.44□□□□□ -0.42
MMP28-204ENST00000615136 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.43□□□□□ -0.42
MMP28-204ENST00000615136 RMI2Q96E14 147 aa12.43□□□□□ -0.42
MMP28-204ENST00000615136 LAMTOR3Q9UHA4 124 aa12.42□□□□□ -0.42
MMP28-204ENST00000615136 ATP5EP2Q5VTU8 51 aa12.4□□□□□ -0.42
MMP28-204ENST00000615136 SERTAD4-AS1Q5TG53 156 aa12.38□□□□□ -0.43
MMP28-204ENST00000615136 GHRHP01286 108 aa12.38□□□□□ -0.43
MMP28-204ENST00000615136 LINC00528Q8N1L1 170 aa12.38□□□□□ -0.43
MMP28-204ENST00000615136 TLX1NBP0CAT3 122 aa12.37□□□□□ -0.43
MMP28-204ENST00000615136 ATOX1O00244 68 aa12.37□□□□□ -0.43
MMP28-204ENST00000615136 PDE6GP18545 87 aa12.36□□□□□ -0.43
MMP28-204ENST00000615136 NUPR2A6NF83 97 aa12.35□□□□□ -0.43
MMP28-204ENST00000615136 DSCR8Q96T75 97 aa12.35□□□□□ -0.43
MMP28-204ENST00000615136 UBL5Q9BZL1 73 aa12.35□□□□□ -0.43
MMP28-204ENST00000615136 SS18L2Q9UHA2 77 aa12.35□□□□□ -0.43
MMP28-204ENST00000615136 FAM168BA1KXE4 195 aa12.35□□□□□ -0.43
MMP28-204ENST00000615136 A0A087WVE0 104 aa12.33□□□□□ -0.43
MMP28-204ENST00000615136 UQCRQO14949 82 aa12.33□□□□□ -0.43
MMP28-204ENST00000615136 C3orf22Q8N5N4 141 aa12.33□□□□□ -0.43
MMP28-204ENST00000615136 PLA2G2DQ9UNK4 145 aa12.33□□□□□ -0.44
MMP28-204ENST00000615136 VPS13DQ5THJ4 4388 aa12.33□□□□□ -0.44
MMP28-204ENST00000615136 TRBV7-4A0A0J9YYF1 115 aa12.32□□□□□ -0.44
MMP28-204ENST00000615136 KRTAP7-1Q8IUC3 87 aa12.32□□□□□ -0.44
MMP28-204ENST00000615136 KCNQ1DNQ9H478 68 aa12.32□□□□□ -0.44
MMP28-204ENST00000615136 M0R2N4 97 aa12.32□□□□□ -0.44
MMP28-204ENST00000615136 NKAPP1Q8N9T2 125 aa12.32□□□□□ -0.44
MMP28-204ENST00000615136 COX7CP15954 63 aa12.3□□□□□ -0.44
MMP28-204ENST00000615136 PSCAO43653 123 aa12.3□□□□□ -0.44
MMP28-204ENST00000615136 C7orf33Q8WU49 177 aa12.3□□□□□ -0.44
MMP28-204ENST00000615136 IGLV5-37A0A075B6J1 123 aa12.27□□□□□ -0.44
MMP28-204ENST00000615136 NBDYA0A0U1RRE5 68 aa12.27□□□□□ -0.44
MMP28-204ENST00000615136 C9orf153Q5TBE3 101 aa12.27□□□□□ -0.45
MMP28-204ENST00000615136 Q6ZVQ6 151 aa12.25□□□□□ -0.45
MMP28-204ENST00000615136 FBN3Q75N90 2809 aa12.25□□□□□ -0.45
MMP28-204ENST00000615136 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.25□□□□□ -0.45
MMP28-204ENST00000615136 LOC107984640A0A0U1RRK4 108 aa12.24□□□□□ -0.45
MMP28-204ENST00000615136 RPL37AP8A6NKH3 93 aa12.24□□□□□ -0.45
MMP28-204ENST00000615136 FAM19A1Q7Z5A9 133 aa12.23□□□□□ -0.45
MMP28-204ENST00000615136 FAM19A5Q7Z5A7 132 aaPredicted RBP12.23□□□□□ -0.45
MMP28-204ENST00000615136 LINC01547P58512 204 aaPredicted RBP12.22□□□□□ -0.45
MMP28-204ENST00000615136 SERP2Q8N6R1 65 aa12.22□□□□□ -0.45
MMP28-204ENST00000615136 PRYO14603 147 aa12.21□□□□□ -0.45
MMP28-204ENST00000615136 CNBPP62633 177 aaKnown RBP12.21□□□□□ -0.45
MMP28-204ENST00000615136 Q6ZRN7 208 aaPredicted RBP12.21□□□□□ -0.45
MMP28-204ENST00000615136 A0A096LNI7 61 aa12.21□□□□□ -0.46
MMP28-204ENST00000615136 LRCOL1A6NCL2 159 aa12.21□□□□□ -0.46
MMP28-204ENST00000615136 CRYGAP11844 174 aa12.21□□□□□ -0.46
MMP28-204ENST00000615136 KMT2AQ03164 3969 aa12.2□□□□□ -0.46
MMP28-204ENST00000615136 IGLV1-50A0A075B6I6 118 aa12.2□□□□□ -0.46
MMP28-204ENST00000615136 KRTAP4-16G5E9R7 235 aaPredicted RBP12.2□□□□□ -0.46
MMP28-204ENST00000615136 SPRR1AP35321 89 aa12.2□□□□□ -0.46
MMP28-204ENST00000615136 Q6ZRX8 168 aa12.19□□□□□ -0.46
MMP28-204ENST00000615136 IGKV2-24A0A0C4DH68 120 aa12.18□□□□□ -0.46
MMP28-204ENST00000615136 CXCL6P80162 114 aa12.18□□□□□ -0.46
MMP28-204ENST00000615136 DHRS4-AS1Q9P1J3 65 aa12.18□□□□□ -0.46
MMP28-204ENST00000615136 HAMPP81172 84 aa12.16□□□□□ -0.46
MMP28-204ENST00000615136 MRPL55Q7Z7F7 128 aaKnown RBP12.15□□□□□ -0.46
MMP28-204ENST00000615136 Q8N377 158 aa12.15□□□□□ -0.46
MMP28-204ENST00000615136 DNAH2Q9P225 4427 aa12.15□□□□□ -0.46
MMP28-204ENST00000615136 A0A1W2PNN7 141 aa12.15□□□□□ -0.47
MMP28-204ENST00000615136 C16orf90A8MZG2 172 aa12.15□□□□□ -0.47
MMP28-204ENST00000615136 Q9BRP9 147 aa12.15□□□□□ -0.47
MMP28-204ENST00000615136 TGP01266 2768 aa12.14□□□□□ -0.47
MMP28-204ENST00000615136 CHTF8P0CG12 524 aa12.13□□□□□ -0.47
MMP28-204ENST00000615136 ETDCA0A1B0GVM5 59 aa12.13□□□□□ -0.47
MMP28-204ENST00000615136 C14orf177Q52M58 125 aa12.13□□□□□ -0.47
MMP28-204ENST00000615136 IGLV5-48A0A075B6I7 105 aa12.12□□□□□ -0.47
MMP28-204ENST00000615136 BCE1O60756 84 aa12.1□□□□□ -0.47
MMP28-204ENST00000615136 DEFB105AQ8NG35 78 aa12.1□□□□□ -0.47
MMP28-204ENST00000615136 C9orf163Q8N9P6 203 aa12.08□□□□□ -0.48
MMP28-204ENST00000615136 CYSTM1Q9H1C7 97 aa12.08□□□□□ -0.48
MMP28-204ENST00000615136 FUSP35637 526 aaKnown RBP eCLIP12.07□□□□□ -0.48
MMP28-204ENST00000615136 TNP2Q05952 138 aa12.06□□□□□ -0.48
MMP28-204ENST00000615136 Q6ZR54 194 aa12.06□□□□□ -0.48
MMP28-204ENST00000615136 PANO1I0J062 215 aa12.05□□□□□ -0.48
MMP28-204ENST00000615136 REG3GQ6UW15 175 aa12.04□□□□□ -0.48
MMP28-204ENST00000615136 SCXQ7RTU7 201 aa12.04□□□□□ -0.48
MMP28-204ENST00000615136 KRTAP11-1Q8IUC1 163 aa12.04□□□□□ -0.48
MMP28-204ENST00000615136 ST20-AS1Q8NBB2 130 aa12.03□□□□□ -0.48
MMP28-204ENST00000615136 HECTD4Q9Y4D8 3996 aa12.03□□□□□ -0.48
MMP28-204ENST00000615136 ERC2-IT1O76042 136 aa12.03□□□□□ -0.48
MMP28-204ENST00000615136 A0A087WTM6 91 aa12.02□□□□□ -0.49
MMP28-204ENST00000615136 PHF5AQ7RTV0 110 aaKnown RBP12.02□□□□□ -0.49
MMP28-204ENST00000615136 SMIM20Q8N5G0 67 aa12.02□□□□□ -0.49
MMP28-204ENST00000615136 A0A1B0GW54 56 aa12.01□□□□□ -0.49
MMP28-204ENST00000615136 DNAH17Q9UFH2 4485 aa12□□□□□ -0.49
MMP28-204ENST00000615136 TRAV7A0A075B6U4 112 aa12□□□□□ -0.49
MMP28-204ENST00000615136 UBE2BP63146 152 aa11.99□□□□□ -0.49
MMP28-204ENST00000615136 NREPQ16612 68 aa11.99□□□□□ -0.49
MMP28-204ENST00000615136 C3orf84H3BNL1 204 aa11.99□□□□□ -0.49
MMP28-204ENST00000615136 TMEM258P61165 79 aa11.99□□□□□ -0.49
MMP28-204ENST00000615136 A0A1W2PNM2 257 aa11.98□□□□□ -0.49
MMP28-204ENST00000615136 C1orf137Q5JT78 98 aa11.98□□□□□ -0.49
MMP28-204ENST00000615136 WWC2-AS2Q96NR7 200 aa11.98□□□□□ -0.49
MMP28-204ENST00000615136 LY6G6CO95867 125 aa11.97□□□□□ -0.49
MMP28-204ENST00000615136 PRLHP81277 87 aa11.96□□□□□ -0.49
MMP28-204ENST00000615136 Q8NBF4 154 aa11.96□□□□□ -0.5
MMP28-204ENST00000615136 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.96□□□□□ -0.5
MMP28-204ENST00000615136 IGKV4-1P06312 121 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms