RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 FAM19A1Q7Z5A9 133 aa12.79□□□□□ -0.36
SMARCD2-212ENST00000613943 TRBV7-6A0A0J9YX20 115 aa12.78□□□□□ -0.36
SMARCD2-212ENST00000613943 F8WDY8 70 aa12.78□□□□□ -0.36
SMARCD2-212ENST00000613943 MDFIQ99750 246 aa12.78□□□□□ -0.36
SMARCD2-212ENST00000613943 UBL5Q9BZL1 73 aa12.78□□□□□ -0.36
SMARCD2-212ENST00000613943 DEFB105AQ8NG35 78 aa12.78□□□□□ -0.36
SMARCD2-212ENST00000613943 FAM19A5Q7Z5A7 132 aaPredicted RBP12.76□□□□□ -0.37
SMARCD2-212ENST00000613943 KCNQ1DNQ9H478 68 aa12.76□□□□□ -0.37
SMARCD2-212ENST00000613943 TLX1NBP0CAT3 122 aa12.76□□□□□ -0.37
SMARCD2-212ENST00000613943 UPK3BQ9BT76 320 aa12.75□□□□□ -0.37
SMARCD2-212ENST00000613943 TRBV7-4A0A0J9YYF1 115 aa12.73□□□□□ -0.37
SMARCD2-212ENST00000613943 RMI2Q96E14 147 aa12.73□□□□□ -0.37
SMARCD2-212ENST00000613943 HAMPP81172 84 aa12.72□□□□□ -0.37
SMARCD2-212ENST00000613943 Q6ZVQ6 151 aa12.72□□□□□ -0.37
SMARCD2-212ENST00000613943 C3orf22Q8N5N4 141 aa12.72□□□□□ -0.37
SMARCD2-212ENST00000613943 IGLV1-50A0A075B6I6 118 aa12.7□□□□□ -0.38
SMARCD2-212ENST00000613943 ATOX1O00244 68 aa12.7□□□□□ -0.38
SMARCD2-212ENST00000613943 Q9BRP9 147 aa12.7□□□□□ -0.38
SMARCD2-212ENST00000613943 C9orf153Q5TBE3 101 aa12.69□□□□□ -0.38
SMARCD2-212ENST00000613943 H3BQ85 93 aa12.68□□□□□ -0.38
SMARCD2-212ENST00000613943 LINC01547P58512 204 aaPredicted RBP12.68□□□□□ -0.38
SMARCD2-212ENST00000613943 SCXQ7RTU7 201 aa12.68□□□□□ -0.38
SMARCD2-212ENST00000613943 PLECQ15149 4684 aaKnown RBP12.68□□□□□ -0.38
SMARCD2-212ENST00000613943 UBE2DNLQ8IWF7 75 aa12.68□□□□□ -0.38
SMARCD2-212ENST00000613943 IGKV2-24A0A0C4DH68 120 aa12.67□□□□□ -0.38
SMARCD2-212ENST00000613943 UQCRQO14949 82 aa12.67□□□□□ -0.38
SMARCD2-212ENST00000613943 Q8N377 158 aa12.67□□□□□ -0.38
SMARCD2-212ENST00000613943 ST20-AS1Q8NBB2 130 aa12.67□□□□□ -0.38
SMARCD2-212ENST00000613943 PLA2G2DQ9UNK4 145 aa12.67□□□□□ -0.38
SMARCD2-212ENST00000613943 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.66□□□□□ -0.38
SMARCD2-212ENST00000613943 KRTAP4-16G5E9R7 235 aaPredicted RBP12.66□□□□□ -0.38
SMARCD2-212ENST00000613943 COX7CP15954 63 aa12.66□□□□□ -0.38
SMARCD2-212ENST00000613943 ATP5EP2Q5VTU8 51 aa12.66□□□□□ -0.38
SMARCD2-212ENST00000613943 MRPL55Q7Z7F7 128 aaKnown RBP12.66□□□□□ -0.38
SMARCD2-212ENST00000613943 Q6ZRX8 168 aa12.66□□□□□ -0.38
SMARCD2-212ENST00000613943 PSCAO43653 123 aa12.65□□□□□ -0.38
SMARCD2-212ENST00000613943 LOC107984640A0A0U1RRK4 108 aa12.65□□□□□ -0.39
SMARCD2-212ENST00000613943 GHRHP01286 108 aa12.65□□□□□ -0.39
SMARCD2-212ENST00000613943 PDE6GP18545 87 aa12.65□□□□□ -0.39
SMARCD2-212ENST00000613943 ETDCA0A1B0GVM5 59 aa12.64□□□□□ -0.39
SMARCD2-212ENST00000613943 CYSTM1Q9H1C7 97 aa12.64□□□□□ -0.39
SMARCD2-212ENST00000613943 APLNQ9ULZ1 77 aa12.64□□□□□ -0.39
SMARCD2-212ENST00000613943 A0A096LNI7 61 aa12.63□□□□□ -0.39
SMARCD2-212ENST00000613943 IGLV5-37A0A075B6J1 123 aa12.63□□□□□ -0.39
SMARCD2-212ENST00000613943 ERC2-IT1O76042 136 aa12.63□□□□□ -0.39
SMARCD2-212ENST00000613943 PRYO14603 147 aa12.61□□□□□ -0.39
SMARCD2-212ENST00000613943 SPRR1AP35321 89 aa12.61□□□□□ -0.39
SMARCD2-212ENST00000613943 C3orf84H3BNL1 204 aa12.6□□□□□ -0.39
SMARCD2-212ENST00000613943 DYNC2H1Q8NCM8 4307 aaKnown RBP12.59□□□□□ -0.39
SMARCD2-212ENST00000613943 A0A1W2PNN7 141 aa12.59□□□□□ -0.39
SMARCD2-212ENST00000613943 PRKDCP78527 4128 aaKnown RBP12.58□□□□□ -0.39
SMARCD2-212ENST00000613943 UBE2BP63146 152 aa12.58□□□□□ -0.4
SMARCD2-212ENST00000613943 SERP2Q8N6R1 65 aa12.58□□□□□ -0.4
SMARCD2-212ENST00000613943 DHRS4-AS1Q9P1J3 65 aa12.57□□□□□ -0.4
SMARCD2-212ENST00000613943 CHTF8P0CG12 524 aa12.57□□□□□ -0.4
SMARCD2-212ENST00000613943 STARD9Q9P2P6 4700 aa12.56□□□□□ -0.4
SMARCD2-212ENST00000613943 B9D2Q9BPU9 175 aa12.56□□□□□ -0.4
SMARCD2-212ENST00000613943 Q8N9L7 120 aa12.55□□□□□ -0.4
SMARCD2-212ENST00000613943 REG3GQ6UW15 175 aa12.54□□□□□ -0.4
SMARCD2-212ENST00000613943 PRLHP81277 87 aa12.53□□□□□ -0.4
SMARCD2-212ENST00000613943 C16orf90A8MZG2 172 aa12.53□□□□□ -0.4
SMARCD2-212ENST00000613943 CRYGAP11844 174 aa12.52□□□□□ -0.41
SMARCD2-212ENST00000613943 CNBPP62633 177 aaKnown RBP12.51□□□□□ -0.41
SMARCD2-212ENST00000613943 CXCL6P80162 114 aa12.51□□□□□ -0.41
SMARCD2-212ENST00000613943 SRRM2Q9UQ35 2752 aaKnown RBP12.51□□□□□ -0.41
SMARCD2-212ENST00000613943 IGLV5-48A0A075B6I7 105 aa12.51□□□□□ -0.41
SMARCD2-212ENST00000613943 A0A0G2JQZ4 141 aa12.5□□□□□ -0.41
SMARCD2-212ENST00000613943 KRTAP11-1Q8IUC1 163 aa12.49□□□□□ -0.41
SMARCD2-212ENST00000613943 A0A1W2PNM2 257 aa12.48□□□□□ -0.41
SMARCD2-212ENST00000613943 SMIM20Q8N5G0 67 aa12.48□□□□□ -0.41
SMARCD2-212ENST00000613943 NREPQ16612 68 aa12.47□□□□□ -0.41
SMARCD2-212ENST00000613943 C1orf137Q5JT78 98 aa12.47□□□□□ -0.41
SMARCD2-212ENST00000613943 PHF5AQ7RTV0 110 aaKnown RBP12.47□□□□□ -0.41
SMARCD2-212ENST00000613943 TNP2Q05952 138 aa12.46□□□□□ -0.41
SMARCD2-212ENST00000613943 DNHD1Q96M86 4753 aa12.46□□□□□ -0.41
SMARCD2-212ENST00000613943 BPY2O14599 106 aa12.45□□□□□ -0.42
SMARCD2-212ENST00000613943 HIGD2AQ9BW72 106 aa12.45□□□□□ -0.42
SMARCD2-212ENST00000613943 NBDYA0A0U1RRE5 68 aa12.44□□□□□ -0.42
SMARCD2-212ENST00000613943 FUSP35637 526 aaKnown RBP eCLIP12.44□□□□□ -0.42
SMARCD2-212ENST00000613943 LRCOL1A6NCL2 159 aa12.43□□□□□ -0.42
SMARCD2-212ENST00000613943 SMIM29Q86T20 159 aa12.43□□□□□ -0.42
SMARCD2-212ENST00000613943 KMT2AQ03164 3969 aa12.42□□□□□ -0.42
SMARCD2-212ENST00000613943 MEGF8Q7Z7M0 2845 aa12.42□□□□□ -0.42
SMARCD2-212ENST00000613943 PANO1I0J062 215 aa12.42□□□□□ -0.42
SMARCD2-212ENST00000613943 C20orf197Q8N268 126 aa12.42□□□□□ -0.42
SMARCD2-212ENST00000613943 IGKV4-1P06312 121 aa12.39□□□□□ -0.43
SMARCD2-212ENST00000613943 NUPR2A6NF83 97 aa12.38□□□□□ -0.43
SMARCD2-212ENST00000613943 C14orf177Q52M58 125 aa12.38□□□□□ -0.43
SMARCD2-212ENST00000613943 Q6ZRN7 208 aaPredicted RBP12.38□□□□□ -0.43
SMARCD2-212ENST00000613943 Q8NBF4 154 aa12.37□□□□□ -0.43
SMARCD2-212ENST00000613943 LINC00476Q8WZB0 136 aa12.37□□□□□ -0.43
SMARCD2-212ENST00000613943 C9orf163Q8N9P6 203 aa12.37□□□□□ -0.43
SMARCD2-212ENST00000613943 VPS13DQ5THJ4 4388 aa12.35□□□□□ -0.43
SMARCD2-212ENST00000613943 TRAV7A0A075B6U4 112 aa12.34□□□□□ -0.43
SMARCD2-212ENST00000613943 EPM2AB3EWF7 344 aa12.33□□□□□ -0.44
SMARCD2-212ENST00000613943 DPH3Q96FX2 82 aa12.33□□□□□ -0.44
SMARCD2-212ENST00000613943 SNURFQ9Y675 71 aa12.33□□□□□ -0.44
SMARCD2-212ENST00000613943 F8WEM9 126 aa12.31□□□□□ -0.44
SMARCD2-212ENST00000613943 IGFL1Q6UW32 110 aa12.31□□□□□ -0.44
SMARCD2-212ENST00000613943 DNAH2Q9P225 4427 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms