RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 HRNRQ86YZ3 2850 aaPredicted RBP11.35□□□□□ -0.59
CDK11B-205ENST00000611150 H3BPC8 53 aa11.35□□□□□ -0.59
CDK11B-205ENST00000611150 Q8NAQ8 132 aa11.35□□□□□ -0.59
CDK11B-205ENST00000611150 A0A087X002 238 aa11.34□□□□□ -0.59
CDK11B-205ENST00000611150 ODF3L2Q3SX64 289 aa11.34□□□□□ -0.59
CDK11B-205ENST00000611150 IGHV4-28A0A0C4DH34 117 aa11.33□□□□□ -0.6
CDK11B-205ENST00000611150 CELSR1Q9NYQ6 3014 aa11.33□□□□□ -0.6
CDK11B-205ENST00000611150 TRGV1A0A0A0MS02 117 aa11.33□□□□□ -0.6
CDK11B-205ENST00000611150 AKAP6Q13023 2319 aa11.33□□□□□ -0.6
CDK11B-205ENST00000611150 DSCR9P59020 149 aa11.32□□□□□ -0.6
CDK11B-205ENST00000611150 LINC00476Q8WZB0 136 aa11.32□□□□□ -0.6
CDK11B-205ENST00000611150 B4DSR2 109 aa11.32□□□□□ -0.6
CDK11B-205ENST00000611150 SPAG11AQ6PDA7 123 aa11.31□□□□□ -0.6
CDK11B-205ENST00000611150 IGHV4-61A0A0C4DH41 118 aa11.3□□□□□ -0.6
CDK11B-205ENST00000611150 K7EQZ3 153 aa11.3□□□□□ -0.6
CDK11B-205ENST00000611150 CNBPP62633 177 aaKnown RBP11.3□□□□□ -0.6
CDK11B-205ENST00000611150 DSCR10P59022 87 aa11.29□□□□□ -0.6
CDK11B-205ENST00000611150 ZFP36P26651 326 aaKnown RBP11.28□□□□□ -0.6
CDK11B-205ENST00000611150 HIVEP1P15822 2718 aa11.28□□□□□ -0.6
CDK11B-205ENST00000611150 DNAJC9-AS1A6NH13 148 aa11.28□□□□□ -0.6
CDK11B-205ENST00000611150 F8P00451 2351 aa11.28□□□□□ -0.6
CDK11B-205ENST00000611150 TEP1Q99973 2627 aaKnown RBP11.27□□□□□ -0.61
CDK11B-205ENST00000611150 A0A1W2PPR1 153 aa11.27□□□□□ -0.61
CDK11B-205ENST00000611150 INSP01308 110 aa11.26□□□□□ -0.61
CDK11B-205ENST00000611150 MAP1AP78559 2803 aaPredicted RBP11.26□□□□□ -0.61
CDK11B-205ENST00000611150 CR1P17927 2039 aa11.26□□□□□ -0.61
CDK11B-205ENST00000611150 ITPR3Q14573 2671 aa11.25□□□□□ -0.61
CDK11B-205ENST00000611150 DEFB131AP59861 70 aa11.25□□□□□ -0.61
CDK11B-205ENST00000611150 KPRPQ5T749 579 aaPredicted RBP11.25□□□□□ -0.61
CDK11B-205ENST00000611150 DEFB112Q30KQ8 113 aa11.24□□□□□ -0.61
CDK11B-205ENST00000611150 DEFB113Q30KQ7 82 aa11.24□□□□□ -0.61
CDK11B-205ENST00000611150 C9orf163Q8N9P6 203 aa11.24□□□□□ -0.61
CDK11B-205ENST00000611150 H0Y9P7 68 aa11.23□□□□□ -0.61
CDK11B-205ENST00000611150 IGLV5-48A0A075B6I7 105 aa11.21□□□□□ -0.62
CDK11B-205ENST00000611150 IGLV7-46A0A075B6I9 117 aa11.21□□□□□ -0.62
CDK11B-205ENST00000611150 IGLV1-40P01703 118 aa11.21□□□□□ -0.62
CDK11B-205ENST00000611150 VPS13CQ709C8 3753 aa11.2□□□□□ -0.62
CDK11B-205ENST00000611150 RTL8CO15255 209 aa11.2□□□□□ -0.62
CDK11B-205ENST00000611150 A0A1W2PNM2 257 aa11.19□□□□□ -0.62
CDK11B-205ENST00000611150 ZNF469Q96JG9 3925 aaPredicted RBP11.19□□□□□ -0.62
CDK11B-205ENST00000611150 CCL19Q99731 98 aa11.19□□□□□ -0.62
CDK11B-205ENST00000611150 IGKV2D-24A0A075B6R9 120 aa11.17□□□□□ -0.62
CDK11B-205ENST00000611150 IGLV1-51P01701 117 aa11.17□□□□□ -0.62
CDK11B-205ENST00000611150 LINC00528Q8N1L1 170 aa11.17□□□□□ -0.62
CDK11B-205ENST00000611150 WNK1Q9H4A3 2382 aa11.17□□□□□ -0.62
CDK11B-205ENST00000611150 ZNF702PQ9H963 129 aa11.16□□□□□ -0.62
CDK11B-205ENST00000611150 DEFB116Q30KQ4 102 aa11.16□□□□□ -0.62
CDK11B-205ENST00000611150 FLNAP21333 2647 aaKnown RBP11.15□□□□□ -0.62
CDK11B-205ENST00000611150 WFDC13Q8IUB5 93 aa11.15□□□□□ -0.62
CDK11B-205ENST00000611150 KRTAP1-3Q8IUG1 177 aa11.15□□□□□ -0.62
CDK11B-205ENST00000611150 MTORP42345 2549 aa11.14□□□□□ -0.63
CDK11B-205ENST00000611150 ACANP16112 2415 aa11.14□□□□□ -0.63
CDK11B-205ENST00000611150 Q8NBF4 154 aa11.12□□□□□ -0.63
CDK11B-205ENST00000611150 IGHV6-1A0A0B4J1U7 121 aa11.12□□□□□ -0.63
CDK11B-205ENST00000611150 CSAG1Q6PB30 78 aa11.12□□□□□ -0.63
CDK11B-205ENST00000611150 A0A1B0GUV1 79 aa11.11□□□□□ -0.63
CDK11B-205ENST00000611150 C11orf71Q6IPW1 123 aa11.11□□□□□ -0.63
CDK11B-205ENST00000611150 CLPSL2Q6UWE3 100 aa11.11□□□□□ -0.63
CDK11B-205ENST00000611150 WFDC10BQ8IUB3 73 aa11.11□□□□□ -0.63
CDK11B-205ENST00000611150 SETD2Q9BYW2 2564 aaPredicted RBP11.11□□□□□ -0.63
CDK11B-205ENST00000611150 SPRR4Q96PI1 79 aa11.1□□□□□ -0.63
CDK11B-205ENST00000611150 A0A0J9YWU9 116 aa11.1□□□□□ -0.63
CDK11B-205ENST00000611150 UNQ6190/PRO20217Q6UXQ8 127 aa11.1□□□□□ -0.63
CDK11B-205ENST00000611150 C2CD3Q4AC94 2353 aa11.09□□□□□ -0.63
CDK11B-205ENST00000611150 C1orf137Q5JT78 98 aa11.09□□□□□ -0.63
CDK11B-205ENST00000611150 C1orf134Q5TEV5 83 aa11.09□□□□□ -0.63
CDK11B-205ENST00000611150 DEFB105AQ8NG35 78 aa11.09□□□□□ -0.63
CDK11B-205ENST00000611150 NF1P21359 2839 aa11.08□□□□□ -0.64
CDK11B-205ENST00000611150 A6NDX4 124 aa11.07□□□□□ -0.64
CDK11B-205ENST00000611150 Q8N377 158 aa11.07□□□□□ -0.64
CDK11B-205ENST00000611150 LY6EQ16553 131 aa11.06□□□□□ -0.64
CDK11B-205ENST00000611150 NOP10Q9NPE3 64 aaKnown RBP11.06□□□□□ -0.64
CDK11B-205ENST00000611150 NIPBLQ6KC79 2804 aaeCLIP11.06□□□□□ -0.641e-6■■■■□ 21.7
CDK11B-205ENST00000611150 A0A0A0MQY5 61 aa11.06□□□□□ -0.64
CDK11B-205ENST00000611150 SMR3AQ99954 134 aa11.06□□□□□ -0.64
CDK11B-205ENST00000611150 IGLV1-50A0A075B6I6 118 aa11.05□□□□□ -0.64
CDK11B-205ENST00000611150 CHCHD10Q8WYQ3 142 aaPredicted RBP11.05□□□□□ -0.64
CDK11B-205ENST00000611150 Q6ZR54 194 aa11.05□□□□□ -0.64
CDK11B-205ENST00000611150 BRD3OSQ6XYD6 125 aa11.03□□□□□ -0.64
CDK11B-205ENST00000611150 MAP6D1Q9H9H5 199 aa11.03□□□□□ -0.64
CDK11B-205ENST00000611150 XAGE1AQ9HD64 81 aa11.03□□□□□ -0.64
CDK11B-205ENST00000611150 ZANQ9Y493 2812 aa11.02□□□□□ -0.64
CDK11B-205ENST00000611150 KRTAP29-1A8MX34 341 aaPredicted RBP11.02□□□□□ -0.65
CDK11B-205ENST00000611150 NSD1Q96L73 2696 aaPredicted RBP11□□□□□ -0.65
CDK11B-205ENST00000611150 C7orf33Q8WU49 177 aa10.99□□□□□ -0.65
CDK11B-205ENST00000611150 SVEP1Q4LDE5 3571 aa10.99□□□□□ -0.65
CDK11B-205ENST00000611150 TLN2Q9Y4G6 2542 aa10.99□□□□□ -0.65
CDK11B-205ENST00000611150 CSPG4Q6UVK1 2322 aa10.98□□□□□ -0.65
CDK11B-205ENST00000611150 IGLV10-54A0A075B6I4 117 aa10.98□□□□□ -0.65
CDK11B-205ENST00000611150 GVQW2A0A096LPI5 108 aaPredicted RBP10.98□□□□□ -0.65
CDK11B-205ENST00000611150 MAPK1IP1LQ8NDC0 245 aa10.98□□□□□ -0.65
CDK11B-205ENST00000611150 H3BUX3 64 aa10.97□□□□□ -0.65
CDK11B-205ENST00000611150 ROMO1P60602 79 aa10.97□□□□□ -0.65
CDK11B-205ENST00000611150 TNP2Q05952 138 aa10.97□□□□□ -0.65
CDK11B-205ENST00000611150 IGLV5-37A0A075B6J1 123 aa10.96□□□□□ -0.65
CDK11B-205ENST00000611150 HIVEP2P31629 2446 aa10.96□□□□□ -0.66
CDK11B-205ENST00000611150 KRTAP21-3Q3LHN1 58 aa10.96□□□□□ -0.66
CDK11B-205ENST00000611150 FN1P02751 2386 aaKnown RBP10.95□□□□□ -0.66
CDK11B-205ENST00000611150 KRTAP1-1Q07627 177 aa10.95□□□□□ -0.66
CDK11B-205ENST00000611150 HRES1P13985 223 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms