RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 KCNQ1DNQ9H478 68 aa8.81□□□□□ -1
NEK3-205ENST00000610828 H3BQ85 93 aa8.81□□□□□ -1
NEK3-205ENST00000610828 PSCAO43653 123 aa8.81□□□□□ -1
NEK3-205ENST00000610828 PLA2G2DQ9UNK4 145 aa8.81□□□□□ -1
NEK3-205ENST00000610828 RPL37AP8A6NKH3 93 aa8.8□□□□□ -1
NEK3-205ENST00000610828 B5MCH6 92 aa8.8□□□□□ -1
NEK3-205ENST00000610828 LOC107984640A0A0U1RRK4 108 aa8.79□□□□□ -1
NEK3-205ENST00000610828 GHRHP01286 108 aa8.79□□□□□ -1
NEK3-205ENST00000610828 TENM2Q9NT68 2774 aa8.79□□□□□ -1
NEK3-205ENST00000610828 Q6ZQT0 140 aa8.79□□□□□ -1
NEK3-205ENST00000610828 DSCR8Q96T75 97 aa8.79□□□□□ -1
NEK3-205ENST00000610828 PLECQ15149 4684 aaKnown RBP8.78□□□□□ -1
NEK3-205ENST00000610828 FAM19A5Q7Z5A7 132 aaPredicted RBP8.78□□□□□ -1
NEK3-205ENST00000610828 IGKV3D-7A0A0C4DH55 119 aa8.78□□□□□ -1
NEK3-205ENST00000610828 LOC110117498A0A087WWA1 95 aa8.77□□□□□ -1.01
NEK3-205ENST00000610828 KRTAP7-1Q8IUC3 87 aa8.77□□□□□ -1.01
NEK3-205ENST00000610828 IGLV5-37A0A075B6J1 123 aa8.77□□□□□ -1.01
NEK3-205ENST00000610828 IGLV1-50A0A075B6I6 118 aa8.76□□□□□ -1.01
NEK3-205ENST00000610828 Q6JHZ5 121 aa8.76□□□□□ -1.01
NEK3-205ENST00000610828 PRKDCP78527 4128 aaKnown RBP8.75□□□□□ -1.01
NEK3-205ENST00000610828 MRPL55Q7Z7F7 128 aaKnown RBP8.75□□□□□ -1.01
NEK3-205ENST00000610828 NUPR2A6NF83 97 aa8.75□□□□□ -1.01
NEK3-205ENST00000610828 M0R2N4 97 aa8.74□□□□□ -1.01
NEK3-205ENST00000610828 PRYO14603 147 aa8.74□□□□□ -1.01
NEK3-205ENST00000610828 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.73□□□□□ -1.01
NEK3-205ENST00000610828 IGKV2-24A0A0C4DH68 120 aa8.73□□□□□ -1.01
NEK3-205ENST00000610828 ETDCA0A1B0GVM5 59 aa8.73□□□□□ -1.01
NEK3-205ENST00000610828 PDE6GP18545 87 aa8.73□□□□□ -1.01
NEK3-205ENST00000610828 CNBPP62633 177 aaKnown RBP8.73□□□□□ -1.01
NEK3-205ENST00000610828 Q6ZRX8 168 aa8.73□□□□□ -1.01
NEK3-205ENST00000610828 UBL5Q9BZL1 73 aa8.73□□□□□ -1.01
NEK3-205ENST00000610828 A0A096LNI7 61 aa8.72□□□□□ -1.01
NEK3-205ENST00000610828 DEFB105AQ8NG35 78 aa8.72□□□□□ -1.01
NEK3-205ENST00000610828 TRBV7-4A0A0J9YYF1 115 aa8.71□□□□□ -1.01
NEK3-205ENST00000610828 KRTAP4-16G5E9R7 235 aaPredicted RBP8.71□□□□□ -1.01
NEK3-205ENST00000610828 A0A087WVE0 104 aa8.71□□□□□ -1.02
NEK3-205ENST00000610828 SPRR1AP35321 89 aa8.71□□□□□ -1.02
NEK3-205ENST00000610828 DHRS4-AS1Q9P1J3 65 aa8.71□□□□□ -1.02
NEK3-205ENST00000610828 C16orf90A8MZG2 172 aa8.7□□□□□ -1.02
NEK3-205ENST00000610828 Q9BRP9 147 aa8.7□□□□□ -1.02
NEK3-205ENST00000610828 STARD9Q9P2P6 4700 aa8.7□□□□□ -1.02
NEK3-205ENST00000610828 NBDYA0A0U1RRE5 68 aa8.7□□□□□ -1.02
NEK3-205ENST00000610828 C14orf177Q52M58 125 aa8.7□□□□□ -1.02
NEK3-205ENST00000610828 DNHD1Q96M86 4753 aa8.68□□□□□ -1.02
NEK3-205ENST00000610828 HIST1H4AP62805 103 aaKnown RBP8.68□□□□□ -1.02
NEK3-205ENST00000610828 ATP5EP2Q5VTU8 51 aa8.68□□□□□ -1.02
NEK3-205ENST00000610828 Q8N377 158 aa8.68□□□□□ -1.02
NEK3-205ENST00000610828 REG3GQ6UW15 175 aa8.67□□□□□ -1.02
NEK3-205ENST00000610828 A0A1W2PNN7 141 aa8.66□□□□□ -1.02
NEK3-205ENST00000610828 MEGF8Q7Z7M0 2845 aa8.66□□□□□ -1.02
NEK3-205ENST00000610828 LINC01547P58512 204 aaPredicted RBP8.65□□□□□ -1.02
NEK3-205ENST00000610828 UBE2BP63146 152 aa8.65□□□□□ -1.02
NEK3-205ENST00000610828 Q6ZVQ6 151 aa8.65□□□□□ -1.02
NEK3-205ENST00000610828 ATOX1O00244 68 aa8.65□□□□□ -1.02
NEK3-205ENST00000610828 C3orf22Q8N5N4 141 aa8.65□□□□□ -1.02
NEK3-205ENST00000610828 LRCOL1A6NCL2 159 aa8.64□□□□□ -1.03
NEK3-205ENST00000610828 ST20-AS1Q8NBB2 130 aa8.64□□□□□ -1.03
NEK3-205ENST00000610828 CHTF8P0CG12 524 aa8.64□□□□□ -1.03
NEK3-205ENST00000610828 HAMPP81172 84 aa8.64□□□□□ -1.03
NEK3-205ENST00000610828 UQCRQO14949 82 aa8.63□□□□□ -1.03
NEK3-205ENST00000610828 ERC2-IT1O76042 136 aa8.63□□□□□ -1.03
NEK3-205ENST00000610828 C9orf153Q5TBE3 101 aa8.63□□□□□ -1.03
NEK3-205ENST00000610828 VPS13DQ5THJ4 4388 aa8.63□□□□□ -1.03
NEK3-205ENST00000610828 FAM19A1Q7Z5A9 133 aa8.63□□□□□ -1.03
NEK3-205ENST00000610828 Q6ZRN7 208 aaPredicted RBP8.62□□□□□ -1.03
NEK3-205ENST00000610828 C9orf163Q8N9P6 203 aa8.62□□□□□ -1.03
NEK3-205ENST00000610828 COX7CP15954 63 aa8.61□□□□□ -1.03
NEK3-205ENST00000610828 IGLV5-48A0A075B6I7 105 aa8.6□□□□□ -1.03
NEK3-205ENST00000610828 SEC61GP60059 68 aa8.6□□□□□ -1.03
NEK3-205ENST00000610828 PRLHP81277 87 aa8.59□□□□□ -1.03
NEK3-205ENST00000610828 PHF5AQ7RTV0 110 aaKnown RBP8.58□□□□□ -1.04
NEK3-205ENST00000610828 KMT2AQ03164 3969 aa8.58□□□□□ -1.04
NEK3-205ENST00000610828 C3orf84H3BNL1 204 aa8.57□□□□□ -1.04
NEK3-205ENST00000610828 CXCL6P80162 114 aa8.56□□□□□ -1.04
NEK3-205ENST00000610828 SCXQ7RTU7 201 aa8.56□□□□□ -1.04
NEK3-205ENST00000610828 PKIGQ9Y2B9 76 aa8.56□□□□□ -1.04
NEK3-205ENST00000610828 TNP2Q05952 138 aa8.56□□□□□ -1.04
NEK3-205ENST00000610828 C1orf137Q5JT78 98 aa8.56□□□□□ -1.04
NEK3-205ENST00000610828 HIGD2AQ9BW72 106 aa8.56□□□□□ -1.04
NEK3-205ENST00000610828 KRTAP11-1Q8IUC1 163 aa8.55□□□□□ -1.04
NEK3-205ENST00000610828 SERP2Q8N6R1 65 aa8.55□□□□□ -1.04
NEK3-205ENST00000610828 LINC00474Q9P2X8 69 aa8.55□□□□□ -1.04
NEK3-205ENST00000610828 FUSP35637 526 aaKnown RBP eCLIP8.54□□□□□ -1.04
NEK3-205ENST00000610828 DPH3Q96FX2 82 aa8.54□□□□□ -1.04
NEK3-205ENST00000610828 PANO1I0J062 215 aa8.54□□□□□ -1.04
NEK3-205ENST00000610828 NREPQ16612 68 aa8.54□□□□□ -1.04
NEK3-205ENST00000610828 DNAH2Q9P225 4427 aa8.53□□□□□ -1.04
NEK3-205ENST00000610828 CRYGAP11844 174 aa8.53□□□□□ -1.04
NEK3-205ENST00000610828 A0A087WTM6 91 aa8.52□□□□□ -1.05
NEK3-205ENST00000610828 A0A1W2PNM2 257 aa8.52□□□□□ -1.05
NEK3-205ENST00000610828 SMIM29Q86T20 159 aa8.52□□□□□ -1.05
NEK3-205ENST00000610828 CYSTM1Q9H1C7 97 aa8.51□□□□□ -1.05
NEK3-205ENST00000610828 F8WEM9 126 aa8.5□□□□□ -1.05
NEK3-205ENST00000610828 EPM2AB3EWF7 344 aa8.5□□□□□ -1.05
NEK3-205ENST00000610828 HECTD4Q9Y4D8 3996 aa8.5□□□□□ -1.05
NEK3-205ENST00000610828 Q8NBF4 154 aa8.49□□□□□ -1.05
NEK3-205ENST00000610828 Q6ZR54 194 aa8.49□□□□□ -1.05
NEK3-205ENST00000610828 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.49□□□□□ -1.05
NEK3-205ENST00000610828 LINC00476Q8WZB0 136 aa8.48□□□□□ -1.05
NEK3-205ENST00000610828 A0A1B0GW54 56 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms