RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 LOC110117498A0A087WWA1 95 aa18.1■□□□□ 0.49
CSPG5-205ENST00000610462 FAM168BA1KXE4 195 aa18.1■□□□□ 0.49
CSPG5-205ENST00000610462 Q6ZQT0 140 aa18.09■□□□□ 0.49
CSPG5-205ENST00000610462 KRTAP7-1Q8IUC3 87 aa18.07■□□□□ 0.48
CSPG5-205ENST00000610462 IGKV3D-7A0A0C4DH55 119 aa18.05■□□□□ 0.48
CSPG5-205ENST00000610462 PSCAO43653 123 aa18.05■□□□□ 0.48
CSPG5-205ENST00000610462 IGLV1-50A0A075B6I6 118 aa18.05■□□□□ 0.48
CSPG5-205ENST00000610462 DSCR8Q96T75 97 aa18.04■□□□□ 0.48
CSPG5-205ENST00000610462 PRYO14603 147 aa18.03■□□□□ 0.48
CSPG5-205ENST00000610462 NUPR2A6NF83 97 aa18.03■□□□□ 0.48
CSPG5-205ENST00000610462 HIST1H4AP62805 103 aaKnown RBP18.03■□□□□ 0.48
CSPG5-205ENST00000610462 RPL37AP8A6NKH3 93 aa18.02■□□□□ 0.48
CSPG5-205ENST00000610462 PDE6GP18545 87 aa18.02■□□□□ 0.47
CSPG5-205ENST00000610462 CNBPP62633 177 aaKnown RBP18.01■□□□□ 0.47
CSPG5-205ENST00000610462 FAM19A5Q7Z5A7 132 aaPredicted RBP18■□□□□ 0.47
CSPG5-205ENST00000610462 SPRR1AP35321 89 aa17.99■□□□□ 0.47
CSPG5-205ENST00000610462 MRPL55Q7Z7F7 128 aaKnown RBP17.99■□□□□ 0.47
CSPG5-205ENST00000610462 KRTAP4-16G5E9R7 235 aaPredicted RBP17.98■□□□□ 0.47
CSPG5-205ENST00000610462 LYSTQ99698 3801 aa17.96■□□□□ 0.47
CSPG5-205ENST00000610462 TRBV7-4A0A0J9YYF1 115 aa17.95■□□□□ 0.46
CSPG5-205ENST00000610462 C14orf177Q52M58 125 aa17.95■□□□□ 0.46
CSPG5-205ENST00000610462 Q6ZRX8 168 aa17.95■□□□□ 0.46
CSPG5-205ENST00000610462 ATOX1O00244 68 aa17.95■□□□□ 0.46
CSPG5-205ENST00000610462 C3orf22Q8N5N4 141 aa17.95■□□□□ 0.46
CSPG5-205ENST00000610462 DHRS4-AS1Q9P1J3 65 aa17.94■□□□□ 0.46
CSPG5-205ENST00000610462 ETDCA0A1B0GVM5 59 aa17.93■□□□□ 0.46
CSPG5-205ENST00000610462 M0R2N4 97 aa17.93■□□□□ 0.46
CSPG5-205ENST00000610462 UBL5Q9BZL1 73 aa17.93■□□□□ 0.46
CSPG5-205ENST00000610462 C16orf90A8MZG2 172 aa17.92■□□□□ 0.46
CSPG5-205ENST00000610462 UQCRQO14949 82 aa17.92■□□□□ 0.46
CSPG5-205ENST00000610462 DNAH10Q8IVF4 4471 aa17.92■□□□□ 0.46
CSPG5-205ENST00000610462 A0A096LNI7 61 aa17.91■□□□□ 0.46
CSPG5-205ENST00000610462 NBDYA0A0U1RRE5 68 aa17.91■□□□□ 0.46
CSPG5-205ENST00000610462 ATP5EP2Q5VTU8 51 aa17.91■□□□□ 0.46
CSPG5-205ENST00000610462 A0A087WVE0 104 aa17.9■□□□□ 0.46
CSPG5-205ENST00000610462 Q9BRP9 147 aa17.89■□□□□ 0.45
CSPG5-205ENST00000610462 C9orf153Q5TBE3 101 aa17.88■□□□□ 0.45
CSPG5-205ENST00000610462 CSMD3Q7Z407 3707 aa17.87■□□□□ 0.45
CSPG5-205ENST00000610462 COX7CP15954 63 aa17.87■□□□□ 0.45
CSPG5-205ENST00000610462 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.87■□□□□ 0.45
CSPG5-205ENST00000610462 Q8N377 158 aa17.86■□□□□ 0.45
CSPG5-205ENST00000610462 IGKV2-24A0A0C4DH68 120 aa17.85■□□□□ 0.45
CSPG5-205ENST00000610462 PLECQ15149 4684 aaKnown RBP17.85■□□□□ 0.45
CSPG5-205ENST00000610462 DEFB105AQ8NG35 78 aa17.84■□□□□ 0.45
CSPG5-205ENST00000610462 LINC01547P58512 204 aaPredicted RBP17.84■□□□□ 0.45
CSPG5-205ENST00000610462 REG3GQ6UW15 175 aa17.83■□□□□ 0.45
CSPG5-205ENST00000610462 LRCOL1A6NCL2 159 aa17.83■□□□□ 0.44
CSPG5-205ENST00000610462 A0A1W2PNN7 141 aa17.81■□□□□ 0.44
CSPG5-205ENST00000610462 DNAH7Q8WXX0 4024 aa17.8■□□□□ 0.44
CSPG5-205ENST00000610462 Q6ZRN7 208 aaPredicted RBP17.79■□□□□ 0.44
CSPG5-205ENST00000610462 Q6ZVQ6 151 aa17.79■□□□□ 0.44
CSPG5-205ENST00000610462 UBE2BP63146 152 aa17.76■□□□□ 0.43
CSPG5-205ENST00000610462 C9orf163Q8N9P6 203 aa17.76■□□□□ 0.43
CSPG5-205ENST00000610462 IGLV5-48A0A075B6I7 105 aa17.75■□□□□ 0.43
CSPG5-205ENST00000610462 ST20-AS1Q8NBB2 130 aa17.74■□□□□ 0.43
CSPG5-205ENST00000610462 ERC2-IT1O76042 136 aa17.73■□□□□ 0.43
CSPG5-205ENST00000610462 CRYGAP11844 174 aa17.73■□□□□ 0.43
CSPG5-205ENST00000610462 TENM2Q9NT68 2774 aa17.73■□□□□ 0.43
CSPG5-205ENST00000610462 FAM19A1Q7Z5A9 133 aa17.73■□□□□ 0.43
CSPG5-205ENST00000610462 SERP2Q8N6R1 65 aa17.73■□□□□ 0.43
CSPG5-205ENST00000610462 PKIGQ9Y2B9 76 aa17.73■□□□□ 0.43
CSPG5-205ENST00000610462 PRKDCP78527 4128 aaKnown RBP17.73■□□□□ 0.43
CSPG5-205ENST00000610462 CHTF8P0CG12 524 aa17.71■□□□□ 0.43
CSPG5-205ENST00000610462 VPS13DQ5THJ4 4388 aa17.69■□□□□ 0.42
CSPG5-205ENST00000610462 HAMPP81172 84 aa17.69■□□□□ 0.42
CSPG5-205ENST00000610462 STARD9Q9P2P6 4700 aa17.67■□□□□ 0.42
CSPG5-205ENST00000610462 CXCL6P80162 114 aa17.65■□□□□ 0.42
CSPG5-205ENST00000610462 TNP2Q05952 138 aa17.65■□□□□ 0.42
CSPG5-205ENST00000610462 PHF5AQ7RTV0 110 aaKnown RBP17.63■□□□□ 0.41
CSPG5-205ENST00000610462 SMIM20Q8N5G0 67 aa17.63■□□□□ 0.41
CSPG5-205ENST00000610462 LINC00474Q9P2X8 69 aa17.62■□□□□ 0.41
CSPG5-205ENST00000610462 PRLHP81277 87 aa17.6■□□□□ 0.41
CSPG5-205ENST00000610462 C1orf137Q5JT78 98 aa17.57■□□□□ 0.4
CSPG5-205ENST00000610462 KRTAP11-1Q8IUC1 163 aa17.57■□□□□ 0.4
CSPG5-205ENST00000610462 MEGF8Q7Z7M0 2845 aa17.57■□□□□ 0.4
CSPG5-205ENST00000610462 CYSTM1Q9H1C7 97 aa17.57■□□□□ 0.4
CSPG5-205ENST00000610462 SMIM29Q86T20 159 aa17.56■□□□□ 0.4
CSPG5-205ENST00000610462 A0A087WTM6 91 aa17.54■□□□□ 0.4
CSPG5-205ENST00000610462 A0A1B0GW54 56 aa17.54■□□□□ 0.4
CSPG5-205ENST00000610462 FUSP35637 526 aaKnown RBP eCLIP17.54■□□□□ 0.4
CSPG5-205ENST00000610462 A0A1W2PNM2 257 aa17.53■□□□□ 0.4
CSPG5-205ENST00000610462 C3orf84H3BNL1 204 aa17.52■□□□□ 0.4
CSPG5-205ENST00000610462 NREPQ16612 68 aa17.52■□□□□ 0.4
CSPG5-205ENST00000610462 Q6ZR54 194 aa17.52■□□□□ 0.4
CSPG5-205ENST00000610462 HIGD2AQ9BW72 106 aa17.52■□□□□ 0.4
CSPG5-205ENST00000610462 PANO1I0J062 215 aa17.52■□□□□ 0.39
CSPG5-205ENST00000610462 DNHD1Q96M86 4753 aa17.51■□□□□ 0.39
CSPG5-205ENST00000610462 H0Y9J4 135 aa17.51■□□□□ 0.39
CSPG5-205ENST00000610462 SCXQ7RTU7 201 aa17.51■□□□□ 0.39
CSPG5-205ENST00000610462 Q8NBF4 154 aa17.49■□□□□ 0.39
CSPG5-205ENST00000610462 EPM2AB3EWF7 344 aa17.47■□□□□ 0.39
CSPG5-205ENST00000610462 F8WEM9 126 aa17.47■□□□□ 0.39
CSPG5-205ENST00000610462 BCE1O60756 84 aa17.46■□□□□ 0.39
CSPG5-205ENST00000610462 SPACA4Q8TDM5 124 aa17.46■□□□□ 0.39
CSPG5-205ENST00000610462 DPH3Q96FX2 82 aa17.46■□□□□ 0.39
CSPG5-205ENST00000610462 SPRR4Q96PI1 79 aa17.45■□□□□ 0.38
CSPG5-205ENST00000610462 LINC00476Q8WZB0 136 aa17.44■□□□□ 0.38
CSPG5-205ENST00000610462 TMEM258P61165 79 aa17.43■□□□□ 0.38
CSPG5-205ENST00000610462 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.43■□□□□ 0.38
CSPG5-205ENST00000610462 UBE2AP49459 152 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms