RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 KCNQ1DNQ9H478 68 aa9.45□□□□□ -0.9
PCDHB16-201ENST00000609684 IGLV1-50A0A075B6I6 118 aa9.45□□□□□ -0.9
PCDHB16-201ENST00000609684 ZNF575Q86XF7 245 aa9.45□□□□□ -0.9
PCDHB16-201ENST00000609684 PMAIP1Q13794 54 aa9.45□□□□□ -0.9
PCDHB16-201ENST00000609684 TP53AIP1Q9HCN2 124 aa9.45□□□□□ -0.9
PCDHB16-201ENST00000609684 RPL37AP61513 92 aaKnown RBP9.44□□□□□ -0.9
PCDHB16-201ENST00000609684 KRTAP1-1Q07627 177 aa9.44□□□□□ -0.9
PCDHB16-201ENST00000609684 TRBV7-4A0A0J9YYF1 115 aa9.43□□□□□ -0.9
PCDHB16-201ENST00000609684 PRUNE2Q8WUY3 3088 aa9.41□□□□□ -0.9
PCDHB16-201ENST00000609684 ZNF292O60281 2723 aa9.4□□□□□ -0.9
PCDHB16-201ENST00000609684 C9orf129Q5T035 196 aaKnown RBP9.39□□□□□ -0.91
PCDHB16-201ENST00000609684 TRAV22A0A0B4J277 110 aa9.38□□□□□ -0.91
PCDHB16-201ENST00000609684 WDFY4Q6ZS81 3184 aa9.38□□□□□ -0.91
PCDHB16-201ENST00000609684 UNC80Q8N2C7 3258 aa9.37□□□□□ -0.91
PCDHB16-201ENST00000609684 K7EQZ3 153 aa9.37□□□□□ -0.91
PCDHB16-201ENST00000609684 RPS28P62857 69 aaKnown RBP9.36□□□□□ -0.91
PCDHB16-201ENST00000609684 H3BPC8 53 aa9.35□□□□□ -0.91
PCDHB16-201ENST00000609684 Q8N377 158 aa9.34□□□□□ -0.91
PCDHB16-201ENST00000609684 C7orf65Q6ZTY9 151 aa9.33□□□□□ -0.92
PCDHB16-201ENST00000609684 IGFL1Q6UW32 110 aa9.33□□□□□ -0.92
PCDHB16-201ENST00000609684 WWC2-AS2Q96NR7 200 aa9.33□□□□□ -0.92
PCDHB16-201ENST00000609684 A8MWP4 228 aa9.33□□□□□ -0.92
PCDHB16-201ENST00000609684 TYMSOSQ8TAI1 123 aa9.33□□□□□ -0.92
PCDHB16-201ENST00000609684 LINC00313P59037 77 aa9.33□□□□□ -0.92
PCDHB16-201ENST00000609684 C4orf26Q17RF5 130 aa9.31□□□□□ -0.92
PCDHB16-201ENST00000609684 TLX1NBP0CAT3 122 aa9.31□□□□□ -0.92
PCDHB16-201ENST00000609684 ACYP2P14621 99 aa9.3□□□□□ -0.92
PCDHB16-201ENST00000609684 CASC10Q5T4H9 136 aa9.3□□□□□ -0.92
PCDHB16-201ENST00000609684 A0A0G2JQZ4 141 aa9.29□□□□□ -0.92
PCDHB16-201ENST00000609684 A0A1W2PNN7 141 aa9.29□□□□□ -0.92
PCDHB16-201ENST00000609684 SPAG11AQ6PDA7 123 aa9.28□□□□□ -0.92
PCDHB16-201ENST00000609684 AKAP13Q12802 2813 aa9.28□□□□□ -0.92
PCDHB16-201ENST00000609684 XIRP2A4UGR9 3374 aa9.28□□□□□ -0.92
PCDHB16-201ENST00000609684 C9orf163Q8N9P6 203 aa9.27□□□□□ -0.92
PCDHB16-201ENST00000609684 PLA2G2DQ9UNK4 145 aa9.27□□□□□ -0.92
PCDHB16-201ENST00000609684 A0A1B0GU69 56 aa9.27□□□□□ -0.93
PCDHB16-201ENST00000609684 PRO0628Q9UI54 55 aa9.26□□□□□ -0.93
PCDHB16-201ENST00000609684 FAM104AQ969W3 186 aa9.26□□□□□ -0.93
PCDHB16-201ENST00000609684 ERC2-IT1O76042 136 aa9.25□□□□□ -0.93
PCDHB16-201ENST00000609684 A0A087WTM6 91 aa9.25□□□□□ -0.93
PCDHB16-201ENST00000609684 MRPL34Q9BQ48 92 aaKnown RBP9.24□□□□□ -0.93
PCDHB16-201ENST00000609684 FAM229AH3BQW9 127 aa9.23□□□□□ -0.93
PCDHB16-201ENST00000609684 PLA2G1BP04054 148 aaKnown RBP9.23□□□□□ -0.93
PCDHB16-201ENST00000609684 CHD6Q8TD26 2715 aa9.23□□□□□ -0.93
PCDHB16-201ENST00000609684 TRIOO75962 3097 aa9.22□□□□□ -0.93
PCDHB16-201ENST00000609684 ZNF861PO60384 105 aa9.22□□□□□ -0.93
PCDHB16-201ENST00000609684 PRR15Q8IV56 129 aa9.22□□□□□ -0.93
PCDHB16-201ENST00000609684 Q96NJ1 140 aa9.22□□□□□ -0.93
PCDHB16-201ENST00000609684 LOC101927531A0A1B0GV80 90 aa9.22□□□□□ -0.93
PCDHB16-201ENST00000609684 C8orf87E5RJ46 101 aa9.21□□□□□ -0.93
PCDHB16-201ENST00000609684 APLNQ9ULZ1 77 aa9.2□□□□□ -0.94
PCDHB16-201ENST00000609684 VPS13AQ96RL7 3174 aa9.2□□□□□ -0.94
PCDHB16-201ENST00000609684 DSPP15924 2871 aaKnown RBP9.2□□□□□ -0.94
PCDHB16-201ENST00000609684 KLKP1Q107X0 134 aa9.19□□□□□ -0.94
PCDHB16-201ENST00000609684 CDH23Q9H251 3354 aa9.19□□□□□ -0.94
PCDHB16-201ENST00000609684 C8orf17Q9NRJ1 99 aa9.19□□□□□ -0.94
PCDHB16-201ENST00000609684 MAP1AP78559 2803 aaPredicted RBP9.18□□□□□ -0.94
PCDHB16-201ENST00000609684 A0A1W2PNM2 257 aa9.18□□□□□ -0.94
PCDHB16-201ENST00000609684 CNBPP62633 177 aaKnown RBP9.18□□□□□ -0.94
PCDHB16-201ENST00000609684 ANAPC11Q9NYG5 84 aa9.18□□□□□ -0.94
PCDHB16-201ENST00000609684 TEP1Q99973 2627 aaKnown RBP9.18□□□□□ -0.94
PCDHB16-201ENST00000609684 SSBP3-AS1Q7Z2R9 100 aa9.15□□□□□ -0.94
PCDHB16-201ENST00000609684 DSCR10P59022 87 aa9.15□□□□□ -0.94
PCDHB16-201ENST00000609684 CR1P17927 2039 aa9.15□□□□□ -0.95
PCDHB16-201ENST00000609684 A0A1B0GVX0 72 aa9.14□□□□□ -0.95
PCDHB16-201ENST00000609684 PSORS1C2Q9UIG4 136 aa9.14□□□□□ -0.95
PCDHB16-201ENST00000609684 COA5Q86WW8 74 aa9.13□□□□□ -0.95
PCDHB16-201ENST00000609684 OBSCN-AS1Q96MR7 158 aa9.13□□□□□ -0.95
PCDHB16-201ENST00000609684 TEX15Q9BXT5 2789 aa9.13□□□□□ -0.95
PCDHB16-201ENST00000609684 H7BZZ5 65 aa9.12□□□□□ -0.95
PCDHB16-201ENST00000609684 IGLV5-37A0A075B6J1 123 aa9.11□□□□□ -0.95
PCDHB16-201ENST00000609684 LINC01600Q96MT4 127 aa9.11□□□□□ -0.95
PCDHB16-201ENST00000609684 IGLV8-61A0A075B6I0 122 aa9.11□□□□□ -0.95
PCDHB16-201ENST00000609684 IGLV5-48A0A075B6I7 105 aa9.11□□□□□ -0.95
PCDHB16-201ENST00000609684 SPRR4Q96PI1 79 aa9.11□□□□□ -0.95
PCDHB16-201ENST00000609684 IGLV7-43P04211 117 aa9.1□□□□□ -0.95
PCDHB16-201ENST00000609684 A8MUN3 132 aa9.1□□□□□ -0.95
PCDHB16-201ENST00000609684 ATP11AUNQ6ZP68 121 aa9.08□□□□□ -0.96
PCDHB16-201ENST00000609684 WIPF1O43516 503 aa9.08□□□□□ -0.96
PCDHB16-201ENST00000609684 LINC00304Q8N9R0 145 aa9.08□□□□□ -0.96
PCDHB16-201ENST00000609684 GCN1Q92616 2671 aaKnown RBP9.07□□□□□ -0.96
PCDHB16-201ENST00000609684 SMR3BP02814 79 aaPredicted RBP9.06□□□□□ -0.96
PCDHB16-201ENST00000609684 FRYQ5TBA9 3013 aa9.06□□□□□ -0.96
PCDHB16-201ENST00000609684 STAB1Q9NY15 2570 aa9.05□□□□□ -0.96
PCDHB16-201ENST00000609684 IGSF10Q6WRI0 2623 aa9.04□□□□□ -0.96
PCDHB16-201ENST00000609684 COL6A5A8TX70 2615 aa9.03□□□□□ -0.96
PCDHB16-201ENST00000609684 UNC79Q9P2D8 2635 aa9.02□□□□□ -0.97
PCDHB16-201ENST00000609684 Q8NDZ9 215 aa9.02□□□□□ -0.97
PCDHB16-201ENST00000609684 NOTCH1P46531 2555 aa9.01□□□□□ -0.97
PCDHB16-201ENST00000609684 C9orf92A6NGG3 77 aa9□□□□□ -0.97
PCDHB16-201ENST00000609684 CELSR3Q9NYQ7 3312 aa8.99□□□□□ -0.97
PCDHB16-201ENST00000609684 CYP4F30PQ9H0H9 118 aa8.98□□□□□ -0.97
PCDHB16-201ENST00000609684 SZT2Q5T011 3432 aa8.98□□□□□ -0.97
PCDHB16-201ENST00000609684 SETXQ7Z333 2677 aaKnown RBP8.97□□□□□ -0.97
PCDHB16-201ENST00000609684 TNP2Q05952 138 aa8.97□□□□□ -0.97
PCDHB16-201ENST00000609684 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.97□□□□□ -0.97
PCDHB16-201ENST00000609684 LAMA1P25391 3075 aa8.95□□□□□ -0.98
PCDHB16-201ENST00000609684 OCR1Q9BZK8 76 aa8.95□□□□□ -0.98
PCDHB16-201ENST00000609684 VCANP13611 3396 aa8.93□□□□□ -0.98
PCDHB16-201ENST00000609684 UBR5O95071 2799 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms