RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 NOTCH2Q04721 2471 aa14.66□□□□□ -0.06
SHANK2-220ENST00000608988 C1orf43Q9BWL3 253 aa14.65□□□□□ -0.06
SHANK2-220ENST00000608988 PLA2G2DQ9UNK4 145 aa14.65□□□□□ -0.06
SHANK2-220ENST00000608988 FUSP35637 526 aaKnown RBP eCLIP14.65□□□□□ -0.063e-6■□□□□ 10
SHANK2-220ENST00000608988 SYCNQ0VAF6 134 aa14.64□□□□□ -0.07
SHANK2-220ENST00000608988 Q8N377 158 aa14.64□□□□□ -0.07
SHANK2-220ENST00000608988 Q8N9L7 120 aa14.64□□□□□ -0.07
SHANK2-220ENST00000608988 OTOGQ6ZRI0 2925 aa14.64□□□□□ -0.07
SHANK2-220ENST00000608988 LINC00336Q6ZUF6 198 aa14.63□□□□□ -0.07
SHANK2-220ENST00000608988 ACANP16112 2415 aa14.63□□□□□ -0.07
SHANK2-220ENST00000608988 TLX1NBP0CAT3 122 aa14.61□□□□□ -0.07
SHANK2-220ENST00000608988 LINC01556Q5JQF7 62 aa14.61□□□□□ -0.07
SHANK2-220ENST00000608988 ANK3Q12955 4377 aaKnown RBP14.6□□□□□ -0.07
SHANK2-220ENST00000608988 C7orf33Q8WU49 177 aa14.6□□□□□ -0.07
SHANK2-220ENST00000608988 LCE6AA0A183 80 aa14.59□□□□□ -0.07
SHANK2-220ENST00000608988 C3orf84H3BNL1 204 aa14.59□□□□□ -0.07
SHANK2-220ENST00000608988 FLNBO75369 2602 aaKnown RBP14.59□□□□□ -0.07
SHANK2-220ENST00000608988 IGLV5-37A0A075B6J1 123 aa14.58□□□□□ -0.08
SHANK2-220ENST00000608988 Q6ZRX8 168 aa14.57□□□□□ -0.08
SHANK2-220ENST00000608988 NBEAL2Q6ZNJ1 2754 aa14.55□□□□□ -0.08
SHANK2-220ENST00000608988 TNP2Q05952 138 aa14.55□□□□□ -0.08
SHANK2-220ENST00000608988 LINC00474Q9P2X8 69 aa14.55□□□□□ -0.08
SHANK2-220ENST00000608988 Q6ZTC4 211 aa14.55□□□□□ -0.08
SHANK2-220ENST00000608988 DEFB105AQ8NG35 78 aa14.55□□□□□ -0.08
SHANK2-220ENST00000608988 ESRGQ1W209 222 aa14.54□□□□□ -0.08
SHANK2-220ENST00000608988 CUBNO60494 3623 aa14.53□□□□□ -0.08
SHANK2-220ENST00000608988 IGKV2D-24A0A075B6R9 120 aa14.53□□□□□ -0.08
SHANK2-220ENST00000608988 SPRR1AP35321 89 aa14.53□□□□□ -0.08
SHANK2-220ENST00000608988 SERTAD4-AS1Q5TG53 156 aa14.53□□□□□ -0.08
SHANK2-220ENST00000608988 Q8NBF4 154 aa14.53□□□□□ -0.08
SHANK2-220ENST00000608988 SMR3AQ99954 134 aa14.53□□□□□ -0.08
SHANK2-220ENST00000608988 KRTAP4-16G5E9R7 235 aaPredicted RBP14.52□□□□□ -0.08
SHANK2-220ENST00000608988 SPRR4Q96PI1 79 aa14.52□□□□□ -0.08
SHANK2-220ENST00000608988 A0A1W2PNM2 257 aa14.52□□□□□ -0.09
SHANK2-220ENST00000608988 BAHCC1Q9P281 2608 aa14.51□□□□□ -0.09
SHANK2-220ENST00000608988 C1orf137Q5JT78 98 aa14.51□□□□□ -0.09
SHANK2-220ENST00000608988 HIGD2AQ9BW72 106 aa14.51□□□□□ -0.09
SHANK2-220ENST00000608988 MTORP42345 2549 aa14.5□□□□□ -0.09
SHANK2-220ENST00000608988 SMIM29Q86T20 159 aa14.49□□□□□ -0.09
SHANK2-220ENST00000608988 IGLV1-50A0A075B6I6 118 aa14.48□□□□□ -0.09
SHANK2-220ENST00000608988 ETDCA0A1B0GVM5 59 aa14.48□□□□□ -0.09
SHANK2-220ENST00000608988 Q9BRP9 147 aa14.47□□□□□ -0.09
SHANK2-220ENST00000608988 HIVEP1P15822 2718 aa14.45□□□□□ -0.1
SHANK2-220ENST00000608988 DNAH10OSP0CZ25 163 aa14.45□□□□□ -0.1
SHANK2-220ENST00000608988 HIVEP2P31629 2446 aa14.45□□□□□ -0.1
SHANK2-220ENST00000608988 FAM229BQ4G0N7 80 aa14.44□□□□□ -0.1
SHANK2-220ENST00000608988 FAM30AQ9NZY2 134 aa14.44□□□□□ -0.1
SHANK2-220ENST00000608988 ZCCHC13Q8WW36 166 aaKnown RBP14.42□□□□□ -0.1
SHANK2-220ENST00000608988 DSCR10P59022 87 aa14.4□□□□□ -0.1
SHANK2-220ENST00000608988 hDV103S1A0JD37 113 aa14.39□□□□□ -0.11
SHANK2-220ENST00000608988 RETNQ9HD89 108 aa14.39□□□□□ -0.11
SHANK2-220ENST00000608988 NSD1Q96L73 2696 aaPredicted RBP14.37□□□□□ -0.11
SHANK2-220ENST00000608988 DEFB131BA0A096LNP1 70 aa14.37□□□□□ -0.11
SHANK2-220ENST00000608988 RPL37AP8A6NKH3 93 aa14.37□□□□□ -0.11
SHANK2-220ENST00000608988 INAFM1C9JVW0 142 aa14.36□□□□□ -0.11
SHANK2-220ENST00000608988 MPLKIPQ8TAP9 179 aa14.36□□□□□ -0.11
SHANK2-220ENST00000608988 ST20-AS1Q8NBB2 130 aa14.35□□□□□ -0.11
SHANK2-220ENST00000608988 BRK1Q8WUW1 75 aa14.35□□□□□ -0.11
SHANK2-220ENST00000608988 MRPL55Q7Z7F7 128 aaKnown RBP14.33□□□□□ -0.11
SHANK2-220ENST00000608988 HCG22E2RYF7 251 aa14.33□□□□□ -0.12
SHANK2-220ENST00000608988 CYP4F30PQ9H0H9 118 aa14.32□□□□□ -0.12
SHANK2-220ENST00000608988 K7EQZ3 153 aa14.31□□□□□ -0.12
SHANK2-220ENST00000608988 VWFP04275 2813 aa14.31□□□□□ -0.12
SHANK2-220ENST00000608988 FAM168BA1KXE4 195 aa14.31□□□□□ -0.12
SHANK2-220ENST00000608988 Q1T7F1 81 aa14.31□□□□□ -0.12
SHANK2-220ENST00000608988 NDUFB1O75438 58 aa14.3□□□□□ -0.12
SHANK2-220ENST00000608988 UBE2BP63146 152 aa14.3□□□□□ -0.12
SHANK2-220ENST00000608988 C11orf45Q8TAV5 145 aa14.3□□□□□ -0.12
SHANK2-220ENST00000608988 KRTAP7-1Q8IUC3 87 aa14.29□□□□□ -0.12
SHANK2-220ENST00000608988 REG3GQ6UW15 175 aa14.28□□□□□ -0.12
SHANK2-220ENST00000608988 F8P00451 2351 aa14.27□□□□□ -0.12
SHANK2-220ENST00000608988 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.27□□□□□ -0.12
SHANK2-220ENST00000608988 LINC00476Q8WZB0 136 aa14.27□□□□□ -0.12
SHANK2-220ENST00000608988 IGLV8-61A0A075B6I0 122 aa14.26□□□□□ -0.13
SHANK2-220ENST00000608988 KRTAP10-11P60412 298 aa14.26□□□□□ -0.13
SHANK2-220ENST00000608988 C1orf64Q8NEQ6 169 aa14.26□□□□□ -0.13
SHANK2-220ENST00000608988 PSCAO43653 123 aa14.24□□□□□ -0.13
SHANK2-220ENST00000608988 PKIGQ9Y2B9 76 aa14.22□□□□□ -0.13
SHANK2-220ENST00000608988 OXLD1Q5BKU9 147 aa14.2□□□□□ -0.14
SHANK2-220ENST00000608988 IGFL1Q6UW32 110 aa14.19□□□□□ -0.14
SHANK2-220ENST00000608988 MP68P56378 58 aa14.18□□□□□ -0.14
SHANK2-220ENST00000608988 LINC00588Q9Y4M8 146 aa14.18□□□□□ -0.14
SHANK2-220ENST00000608988 H3BPC8 53 aa14.17□□□□□ -0.14
SHANK2-220ENST00000608988 C1orf195Q5TG92 126 aa14.17□□□□□ -0.14
SHANK2-220ENST00000608988 CASC10Q5T4H9 136 aa14.16□□□□□ -0.14
SHANK2-220ENST00000608988 V9GYY9 64 aa14.16□□□□□ -0.14
SHANK2-220ENST00000608988 PRR15Q8IV56 129 aa14.14□□□□□ -0.15
SHANK2-220ENST00000608988 TRAV22A0A0B4J277 110 aa14.12□□□□□ -0.15
SHANK2-220ENST00000608988 SPANXA2-OT1Q8N9U9 137 aa14.11□□□□□ -0.15
SHANK2-220ENST00000608988 MAST4O15021 2626 aa14.11□□□□□ -0.15
SHANK2-220ENST00000608988 KRTAP29-1A8MX34 341 aaPredicted RBP14.1□□□□□ -0.15
SHANK2-220ENST00000608988 TENM1Q9UKZ4 2725 aa14.09□□□□□ -0.15
SHANK2-220ENST00000608988 TEP1Q99973 2627 aaKnown RBP14.08□□□□□ -0.15
SHANK2-220ENST00000608988 A0A087WSZ3 146 aa14.08□□□□□ -0.16
SHANK2-220ENST00000608988 C16orf90A8MZG2 172 aa14.06□□□□□ -0.16
SHANK2-220ENST00000608988 WFDC13Q8IUB5 93 aa14.06□□□□□ -0.16
SHANK2-220ENST00000608988 SPRR1BP22528 89 aa14.05□□□□□ -0.16
SHANK2-220ENST00000608988 B9D2Q9BPU9 175 aa14.04□□□□□ -0.16
SHANK2-220ENST00000608988 LRCOL1A6NCL2 159 aa14.03□□□□□ -0.16
SHANK2-220ENST00000608988 UBE2AP49459 152 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms