RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 A0A087WTM6 91 aa6.93□□□□□ -1.3
LINC01001-203ENST00000607448 FAM236AA0A1B0GUQ0 79 aa6.92□□□□□ -1.3
LINC01001-203ENST00000607448 FAM236BA0A1B0GV22 79 aa6.92□□□□□ -1.3
LINC01001-203ENST00000607448 NCR3O14931 201 aa6.92□□□□□ -1.3
LINC01001-203ENST00000607448 CDK2AP2O75956 126 aa6.92□□□□□ -1.3
LINC01001-203ENST00000607448 CCKP06307 115 aa6.92□□□□□ -1.3
LINC01001-203ENST00000607448 C9orf116Q5BN46 136 aaPredicted RBP6.92□□□□□ -1.3
LINC01001-203ENST00000607448 ENHOQ6UWT2 76 aa6.92□□□□□ -1.3
LINC01001-203ENST00000607448 UNQ6190/PRO20217Q6UXQ8 127 aa6.92□□□□□ -1.3
LINC01001-203ENST00000607448 SLPIP03973 132 aa6.91□□□□□ -1.3
LINC01001-203ENST00000607448 PRR3P79522 188 aaKnown RBP6.91□□□□□ -1.3
LINC01001-203ENST00000607448 C6orf99Q4VX62 202 aa6.91□□□□□ -1.3
LINC01001-203ENST00000607448 LINC00575Q6W349 94 aa6.91□□□□□ -1.3
LINC01001-203ENST00000607448 F8WDY8 70 aa6.91□□□□□ -1.3
LINC01001-203ENST00000607448 CCDC179H3BU77 68 aa6.91□□□□□ -1.3
LINC01001-203ENST00000607448 IGLV6-57P01721 117 aa6.91□□□□□ -1.3
LINC01001-203ENST00000607448 C9orf129Q5T035 196 aaKnown RBP6.91□□□□□ -1.3
LINC01001-203ENST00000607448 C10orf25Q5T742 122 aa6.91□□□□□ -1.3
LINC01001-203ENST00000607448 LRCOL1A6NCL2 159 aa6.9□□□□□ -1.31
LINC01001-203ENST00000607448 B5MCH6 92 aa6.9□□□□□ -1.31
LINC01001-203ENST00000607448 hADV29S1A0JD25 119 aa6.89□□□□□ -1.31
LINC01001-203ENST00000607448 GHRHP01286 108 aa6.89□□□□□ -1.31
LINC01001-203ENST00000607448 ATP5EP2Q5VTU8 51 aa6.89□□□□□ -1.31
LINC01001-203ENST00000607448 ZNF561-AS1K7EIQ3 104 aa6.88□□□□□ -1.31
LINC01001-203ENST00000607448 HIST1H4AP62805 103 aaKnown RBP6.88□□□□□ -1.31
LINC01001-203ENST00000607448 Q8NDZ9 215 aa6.88□□□□□ -1.31
LINC01001-203ENST00000607448 LINC00846Q9NV44 126 aa6.88□□□□□ -1.31
LINC01001-203ENST00000607448 C6orf48Q9UBA6 75 aa6.88□□□□□ -1.31
LINC01001-203ENST00000607448 TRBV7-6A0A0J9YX20 115 aa6.87□□□□□ -1.31
LINC01001-203ENST00000607448 ATOX1O00244 68 aa6.87□□□□□ -1.31
LINC01001-203ENST00000607448 PSCAO43653 123 aa6.87□□□□□ -1.31
LINC01001-203ENST00000607448 KRTAP10-1P60331 282 aa6.87□□□□□ -1.31
LINC01001-203ENST00000607448 C2orf48Q96LS8 159 aa6.87□□□□□ -1.31
LINC01001-203ENST00000607448 FAT1Q14517 4588 aa6.87□□□□□ -1.31
LINC01001-203ENST00000607448 DNAH8Q96JB1 4490 aa6.87□□□□□ -1.31
LINC01001-203ENST00000607448 RPL18AQ02543 176 aaKnown RBP6.86□□□□□ -1.31
LINC01001-203ENST00000607448 DIRC1Q969H9 104 aa6.86□□□□□ -1.31
LINC01001-203ENST00000607448 LOC110117498A0A087WWA1 95 aa6.86□□□□□ -1.31
LINC01001-203ENST00000607448 UQCRQO14949 82 aa6.86□□□□□ -1.31
LINC01001-203ENST00000607448 PDE6GP18545 87 aa6.86□□□□□ -1.31
LINC01001-203ENST00000607448 KRTAP26-1Q6PEX3 210 aa6.86□□□□□ -1.31
LINC01001-203ENST00000607448 C3orf22Q8N5N4 141 aa6.86□□□□□ -1.31
LINC01001-203ENST00000607448 CAMK2N2Q96S95 79 aa6.86□□□□□ -1.31
LINC01001-203ENST00000607448 TRAV23DV6A0A075B6W5 121 aa6.85□□□□□ -1.31
LINC01001-203ENST00000607448 HAMPP81172 84 aa6.85□□□□□ -1.31
LINC01001-203ENST00000607448 Q8N1X5 172 aa6.85□□□□□ -1.31
LINC01001-203ENST00000607448 LINC00526Q96FQ7 95 aa6.85□□□□□ -1.31
LINC01001-203ENST00000607448 RBM3P98179 157 aaKnown RBP6.84□□□□□ -1.31
LINC01001-203ENST00000607448 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.84□□□□□ -1.31
LINC01001-203ENST00000607448 SS18L2Q9UHA2 77 aa6.84□□□□□ -1.31
LINC01001-203ENST00000607448 TRBV10-3A0A0K0K1G6 114 aa6.83□□□□□ -1.32
LINC01001-203ENST00000607448 M0R378 163 aa6.83□□□□□ -1.32
LINC01001-203ENST00000607448 IGLV5-52A0A0A0MRZ9 124 aa6.82□□□□□ -1.32
LINC01001-203ENST00000607448 IGKV3D-7A0A0C4DH55 119 aa6.82□□□□□ -1.32
LINC01001-203ENST00000607448 VPREB1P12018 145 aa6.82□□□□□ -1.32
LINC01001-203ENST00000607448 COX7CP15954 63 aa6.82□□□□□ -1.32
LINC01001-203ENST00000607448 COX7BP24311 80 aa6.82□□□□□ -1.32
LINC01001-203ENST00000607448 C1orf43Q9BWL3 253 aa6.82□□□□□ -1.32
LINC01001-203ENST00000607448 UBL5Q9BZL1 73 aa6.82□□□□□ -1.32
LINC01001-203ENST00000607448 NDUFC2-KCTD14E9PQ53 114 aa6.82□□□□□ -1.32
LINC01001-203ENST00000607448 ZNF73O43830 326 aaPredicted RBP6.82□□□□□ -1.32
LINC01001-203ENST00000607448 C9orf153Q5TBE3 101 aa6.82□□□□□ -1.32
LINC01001-203ENST00000607448 Q6ZQT0 140 aa6.82□□□□□ -1.32
LINC01001-203ENST00000607448 C15orf56Q8N910 161 aa6.82□□□□□ -1.32
LINC01001-203ENST00000607448 LAMTOR3Q9UHA4 124 aa6.82□□□□□ -1.32
LINC01001-203ENST00000607448 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.81□□□□□ -1.32
LINC01001-203ENST00000607448 IGKV2D-24A0A075B6R9 120 aa6.81□□□□□ -1.32
LINC01001-203ENST00000607448 ELOF1P60002 83 aaKnown RBP6.81□□□□□ -1.32
LINC01001-203ENST00000607448 HIGD2BQ4VC39 106 aa6.81□□□□□ -1.32
LINC01001-203ENST00000607448 XAGE1AQ9HD64 81 aa6.81□□□□□ -1.32
LINC01001-203ENST00000607448 Q6ZQY7 126 aa6.8□□□□□ -1.32
LINC01001-203ENST00000607448 Q6ZRU5 148 aa6.8□□□□□ -1.32
LINC01001-203ENST00000607448 DSCR8Q96T75 97 aa6.8□□□□□ -1.32
LINC01001-203ENST00000607448 FAM30AQ9NZY2 134 aa6.8□□□□□ -1.32
LINC01001-203ENST00000607448 SMR3BP02814 79 aaPredicted RBP6.79□□□□□ -1.32
LINC01001-203ENST00000607448 VPS13BQ7Z7G8 4022 aa6.79□□□□□ -1.32
LINC01001-203ENST00000607448 CRYGAP11844 174 aa6.78□□□□□ -1.32
LINC01001-203ENST00000607448 SYCNQ0VAF6 134 aa6.78□□□□□ -1.32
LINC01001-203ENST00000607448 SERP2Q8N6R1 65 aa6.78□□□□□ -1.32
LINC01001-203ENST00000607448 USP17L23D6RBM5 183 aa6.77□□□□□ -1.33
LINC01001-203ENST00000607448 BCE1O60756 84 aa6.77□□□□□ -1.33
LINC01001-203ENST00000607448 EPM2AB3EWF7 344 aa6.76□□□□□ -1.33
LINC01001-203ENST00000607448 TLX1NBP0CAT3 122 aa6.76□□□□□ -1.33
LINC01001-203ENST00000607448 Q5VSD8 79 aa6.76□□□□□ -1.33
LINC01001-203ENST00000607448 RMI2Q96E14 147 aa6.76□□□□□ -1.33
LINC01001-203ENST00000607448 TRBV7-4A0A0J9YYF1 115 aa6.75□□□□□ -1.33
LINC01001-203ENST00000607448 LINC00528Q8N1L1 170 aa6.75□□□□□ -1.33
LINC01001-203ENST00000607448 PLA2G2DQ9UNK4 145 aa6.75□□□□□ -1.33
LINC01001-203ENST00000607448 SRRM2Q9UQ35 2752 aaKnown RBP6.75□□□□□ -1.33
LINC01001-203ENST00000607448 MYCBP2O75592 4640 aa6.75□□□□□ -1.33
LINC01001-203ENST00000607448 A0A087WVE0 104 aa6.74□□□□□ -1.33
LINC01001-203ENST00000607448 Q6ZSA8 131 aa6.74□□□□□ -1.33
LINC01001-203ENST00000607448 CXCL6P80162 114 aa6.73□□□□□ -1.33
LINC01001-203ENST00000607448 Q6ZRP5 223 aa6.73□□□□□ -1.33
LINC01001-203ENST00000607448 NKAPP1Q8N9T2 125 aa6.73□□□□□ -1.33
LINC01001-203ENST00000607448 KCNQ1DNQ9H478 68 aa6.73□□□□□ -1.33
LINC01001-203ENST00000607448 Q6ZVQ6 151 aa6.72□□□□□ -1.33
LINC01001-203ENST00000607448 IGLV5-37A0A075B6J1 123 aa6.71□□□□□ -1.34
LINC01001-203ENST00000607448 LINC01547P58512 204 aaPredicted RBP6.71□□□□□ -1.34
LINC01001-203ENST00000607448 SMIM20Q8N5G0 67 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms