RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 MUC17Q685J3 4493 aa8.5□□□□□ -1.05
CTSA-216ENST00000607212 MEIG1Q5JSS6 88 aa8.49□□□□□ -1.05
CTSA-216ENST00000607212 DAND5Q8N907 189 aa8.49□□□□□ -1.05
CTSA-216ENST00000607212 Q8NBF4 154 aa8.49□□□□□ -1.05
CTSA-216ENST00000607212 NCR3O14931 201 aa8.48□□□□□ -1.05
CTSA-216ENST00000607212 FP248Q71RG6 208 aaPredicted RBP8.48□□□□□ -1.05
CTSA-216ENST00000607212 CHTOPQ9Y3Y2 248 aaKnown RBP8.48□□□□□ -1.05
CTSA-216ENST00000607212 KRTAP9-6A0A140TA67 174 aa8.47□□□□□ -1.05
CTSA-216ENST00000607212 ETDCA0A1B0GVM5 59 aa8.47□□□□□ -1.05
CTSA-216ENST00000607212 PRYO14603 147 aa8.47□□□□□ -1.05
CTSA-216ENST00000607212 C2orf91Q6ZV80 131 aa8.47□□□□□ -1.05
CTSA-216ENST00000607212 BOD1L2Q8IYS8 172 aa8.47□□□□□ -1.05
CTSA-216ENST00000607212 DLEU1O43261 78 aa8.45□□□□□ -1.06
CTSA-216ENST00000607212 SMIM13P0DJ93 91 aa8.45□□□□□ -1.06
CTSA-216ENST00000607212 BVES-AS1Q5T3Y7 98 aa8.45□□□□□ -1.06
CTSA-216ENST00000607212 SMCR5Q8TEV8 140 aa8.45□□□□□ -1.06
CTSA-216ENST00000607212 NDUFA12Q9UI09 145 aa8.45□□□□□ -1.06
CTSA-216ENST00000607212 LINC01547P58512 204 aaPredicted RBP8.44□□□□□ -1.06
CTSA-216ENST00000607212 GAGE2AQ6NT46 116 aa8.43□□□□□ -1.06
CTSA-216ENST00000607212 IGLV9-49A0A0B4J1Y8 123 aa8.42□□□□□ -1.06
CTSA-216ENST00000607212 TMEM223A0PJW6 202 aa8.42□□□□□ -1.06
CTSA-216ENST00000607212 DPM2O94777 84 aa8.42□□□□□ -1.06
CTSA-216ENST00000607212 MIR7-3HGQ8N6C7 128 aa8.42□□□□□ -1.06
CTSA-216ENST00000607212 TRAV12-1A0A0B4J245 112 aa8.41□□□□□ -1.06
CTSA-216ENST00000607212 SPINK1P00995 79 aa8.41□□□□□ -1.06
CTSA-216ENST00000607212 IGKCP01834 107 aa8.41□□□□□ -1.06
CTSA-216ENST00000607212 KRTAP13-3Q3SY46 172 aa8.41□□□□□ -1.06
CTSA-216ENST00000607212 Q6ZVH6 145 aa8.41□□□□□ -1.06
CTSA-216ENST00000607212 TAX1BP3O14907 124 aa8.4□□□□□ -1.06
CTSA-216ENST00000607212 SEC61BP60468 96 aaKnown RBP8.4□□□□□ -1.06
CTSA-216ENST00000607212 MOBPQ13875 183 aa8.4□□□□□ -1.06
CTSA-216ENST00000607212 PCP2Q8IVA1 136 aa8.4□□□□□ -1.06
CTSA-216ENST00000607212 TRBV10-3A0A0K0K1G6 114 aa8.39□□□□□ -1.07
CTSA-216ENST00000607212 HERV-K104P63124 156 aa8.39□□□□□ -1.07
CTSA-216ENST00000607212 KCNQ1DNQ9H478 68 aa8.39□□□□□ -1.07
CTSA-216ENST00000607212 ASB16-AS1Q495Z4 193 aa8.38□□□□□ -1.07
CTSA-216ENST00000607212 MYMXA0A1B0GTQ4 84 aa8.37□□□□□ -1.07
CTSA-216ENST00000607212 SPRR1AP35321 89 aa8.37□□□□□ -1.07
CTSA-216ENST00000607212 NMUP48645 174 aa8.37□□□□□ -1.07
CTSA-216ENST00000607212 HSD52Q0P140 79 aa8.37□□□□□ -1.07
CTSA-216ENST00000607212 HIGD1BQ9P298 99 aa8.36□□□□□ -1.07
CTSA-216ENST00000607212 PLNP26678 52 aa8.35□□□□□ -1.07
CTSA-216ENST00000607212 LINC00483Q53H64 154 aa8.35□□□□□ -1.07
CTSA-216ENST00000607212 C9orf153Q5TBE3 101 aa8.35□□□□□ -1.07
CTSA-216ENST00000607212 UBE2V1Q13404 147 aa8.34□□□□□ -1.07
CTSA-216ENST00000607212 TTTY13Q9BZ97 58 aa8.34□□□□□ -1.07
CTSA-216ENST00000607212 B5MCH6 92 aa8.33□□□□□ -1.08
CTSA-216ENST00000607212 SLC25A20O43772 301 aa8.33□□□□□ -1.08
CTSA-216ENST00000607212 SSBP3-AS1Q7Z2R9 100 aa8.33□□□□□ -1.08
CTSA-216ENST00000607212 KRTAP4-16G5E9R7 235 aaPredicted RBP8.32□□□□□ -1.08
CTSA-216ENST00000607212 ERC2-IT1O76042 136 aa8.32□□□□□ -1.08
CTSA-216ENST00000607212 S100A7L2Q5SY68 101 aa8.32□□□□□ -1.08
CTSA-216ENST00000607212 Q8N377 158 aa8.32□□□□□ -1.08
CTSA-216ENST00000607212 A6NDN8 102 aa8.3□□□□□ -1.08
CTSA-216ENST00000607212 VAMP3Q15836 100 aa8.3□□□□□ -1.08
CTSA-216ENST00000607212 RPS29P62273 56 aaKnown RBP8.29□□□□□ -1.08
CTSA-216ENST00000607212 Q6ZRX8 168 aa8.29□□□□□ -1.08
CTSA-216ENST00000607212 KRTAP4-1Q9BYQ7 146 aa8.29□□□□□ -1.08
CTSA-216ENST00000607212 TRBV10-2A0A0K0K1G8 114 aa8.28□□□□□ -1.08
CTSA-216ENST00000607212 C9orf118A6NHY6 69 aa8.28□□□□□ -1.08
CTSA-216ENST00000607212 E9PLD3 99 aa8.28□□□□□ -1.08
CTSA-216ENST00000607212 LEPROTO15243 131 aa8.28□□□□□ -1.08
CTSA-216ENST00000607212 TAL2Q16559 108 aa8.28□□□□□ -1.08
CTSA-216ENST00000607212 Q9BRP9 147 aa8.28□□□□□ -1.08
CTSA-216ENST00000607212 SPANXB1Q9NS25 103 aaPredicted RBP8.28□□□□□ -1.08
CTSA-216ENST00000607212 FXYD2P54710 66 aa8.27□□□□□ -1.09
CTSA-216ENST00000607212 TSPEAR-AS2P59090 65 aa8.27□□□□□ -1.09
CTSA-216ENST00000607212 HERVK_113P61574 105 aa8.27□□□□□ -1.09
CTSA-216ENST00000607212 TRAV23DV6A0A075B6W5 121 aa8.26□□□□□ -1.09
CTSA-216ENST00000607212 LGALS3P17931 250 aaKnown RBP8.26□□□□□ -1.09
CTSA-216ENST00000607212 NPC2P61916 151 aa8.26□□□□□ -1.09
CTSA-216ENST00000607212 CEND1Q8N111 149 aa8.26□□□□□ -1.09
CTSA-216ENST00000607212 J3QQQ9 107 aa8.24□□□□□ -1.09
CTSA-216ENST00000607212 XP32Q5T750 250 aa8.24□□□□□ -1.09
CTSA-216ENST00000607212 H3BUT2 72 aa8.23□□□□□ -1.09
CTSA-216ENST00000607212 HRCT1Q6UXD1 115 aa8.23□□□□□ -1.09
CTSA-216ENST00000607212 LOC107984156A0A0G2JMH3 177 aa8.22□□□□□ -1.09
CTSA-216ENST00000607212 ZNF73O43830 326 aaPredicted RBP8.22□□□□□ -1.09
CTSA-216ENST00000607212 ARL17AQ8IVW1 177 aa8.22□□□□□ -1.09
CTSA-216ENST00000607212 ST20-AS1Q8NBB2 130 aa8.22□□□□□ -1.09
CTSA-216ENST00000607212 RAB37Q96AX2 223 aa8.22□□□□□ -1.09
CTSA-216ENST00000607212 NAA38Q9BRA0 125 aaKnown RBP8.22□□□□□ -1.09
CTSA-216ENST00000607212 ZNF815PA8K554 130 aa8.21□□□□□ -1.1
CTSA-216ENST00000607212 K7EP34 96 aa8.21□□□□□ -1.1
CTSA-216ENST00000607212 NDUFC2O95298 119 aa8.21□□□□□ -1.1
CTSA-216ENST00000607212 IGLV6-57P01721 117 aa8.21□□□□□ -1.1
CTSA-216ENST00000607212 A0A1B0GWB2 263 aa8.2□□□□□ -1.1
CTSA-216ENST00000607212 A0A1W2PPM0 123 aa8.2□□□□□ -1.1
CTSA-216ENST00000607212 K7ERJ3 54 aa8.2□□□□□ -1.1
CTSA-216ENST00000607212 LCE2DQ5TA82 110 aaPredicted RBP8.2□□□□□ -1.1
CTSA-216ENST00000607212 HIST1H4GQ99525 98 aa8.2□□□□□ -1.1
CTSA-216ENST00000607212 LIMD2Q9BT23 127 aa8.2□□□□□ -1.1
CTSA-216ENST00000607212 CBY1Q9Y3M2 126 aa8.2□□□□□ -1.1
CTSA-216ENST00000607212 C9orf92A6NGG3 77 aa8.19□□□□□ -1.1
CTSA-216ENST00000607212 OR13C6PQ8NH95 151 aa8.19□□□□□ -1.1
CTSA-216ENST00000607212 NHP2Q9NX24 153 aaKnown RBP8.19□□□□□ -1.1
CTSA-216ENST00000607212 GTF2H5Q6ZYL4 71 aa8.18□□□□□ -1.1
CTSA-216ENST00000607212 IGLV8-61A0A075B6I0 122 aa8.17□□□□□ -1.1
CTSA-216ENST00000607212 PCOTHQ58A44 107 aa8.17□□□□□ -1.1
CTSA-216ENST00000607212 FABP2P12104 132 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms