RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 LINC00167Q96N53 147 aa7.3□□□□□ -1.24
HLA-F-230ENST00000606273 LITAFQ99732 161 aa7.3□□□□□ -1.24
HLA-F-230ENST00000606273 ZNF815PA8K554 130 aa7.29□□□□□ -1.24
HLA-F-230ENST00000606273 SOSTDC1Q6X4U4 206 aa7.29□□□□□ -1.24
HLA-F-230ENST00000606273 TP73-AS1Q9UF72 201 aa7.29□□□□□ -1.24
HLA-F-230ENST00000606273 RPL37AP8A6NKH3 93 aa7.28□□□□□ -1.24
HLA-F-230ENST00000606273 SCGB1D1O95968 90 aa7.28□□□□□ -1.24
HLA-F-230ENST00000606273 UBE2BP63146 152 aa7.28□□□□□ -1.24
HLA-F-230ENST00000606273 C1orf137Q5JT78 98 aa7.28□□□□□ -1.24
HLA-F-230ENST00000606273 NPC2P61916 151 aa7.27□□□□□ -1.25
HLA-F-230ENST00000606273 BOD1L2Q8IYS8 172 aa7.27□□□□□ -1.25
HLA-F-230ENST00000606273 LOC107984156A0A0G2JMH3 177 aa7.26□□□□□ -1.25
HLA-F-230ENST00000606273 LINC00587B1AMM8 73 aa7.26□□□□□ -1.25
HLA-F-230ENST00000606273 KRTAP10-6P60371 365 aaPredicted RBP7.26□□□□□ -1.25
HLA-F-230ENST00000606273 LBHQ53QV2 105 aaPredicted RBP7.26□□□□□ -1.25
HLA-F-230ENST00000606273 ARL17AQ8IVW1 177 aa7.26□□□□□ -1.25
HLA-F-230ENST00000606273 NKAPP1Q8N9T2 125 aa7.26□□□□□ -1.25
HLA-F-230ENST00000606273 IGKV2-28A0A075B6P5 120 aa7.25□□□□□ -1.25
HLA-F-230ENST00000606273 IGKV2D-28P01615 120 aa7.25□□□□□ -1.25
HLA-F-230ENST00000606273 IGLV1-50A0A075B6I6 118 aa7.24□□□□□ -1.25
HLA-F-230ENST00000606273 IGKV2D-30A0A075B6S6 120 aa7.24□□□□□ -1.25
HLA-F-230ENST00000606273 NCR3O14931 201 aa7.24□□□□□ -1.25
HLA-F-230ENST00000606273 IGLV7-43P04211 117 aa7.24□□□□□ -1.25
HLA-F-230ENST00000606273 AKR1D1P51857 326 aa7.24□□□□□ -1.25
HLA-F-230ENST00000606273 RPL24P83731 157 aaKnown RBP7.24□□□□□ -1.25
HLA-F-230ENST00000606273 MUC17Q685J3 4493 aa7.23□□□□□ -1.25
HLA-F-230ENST00000606273 TMEM238C9JI98 176 aa7.23□□□□□ -1.25
HLA-F-230ENST00000606273 TIMM17BO60830 172 aa7.23□□□□□ -1.25
HLA-F-230ENST00000606273 JOSD1Q15040 202 aaPredicted RBP7.23□□□□□ -1.25
HLA-F-230ENST00000606273 M0R378 163 aa7.22□□□□□ -1.25
HLA-F-230ENST00000606273 LINC00308Q8TCZ7 52 aa7.22□□□□□ -1.25
HLA-F-230ENST00000606273 PYY3Q5JQD4 70 aa7.21□□□□□ -1.26
HLA-F-230ENST00000606273 SCGB1D4Q6XE38 83 aa7.21□□□□□ -1.26
HLA-F-230ENST00000606273 TRBV10-3A0A0K0K1G6 114 aa7.2□□□□□ -1.26
HLA-F-230ENST00000606273 HSBP1L1C9JCN9 74 aa7.2□□□□□ -1.26
HLA-F-230ENST00000606273 BCE1O60756 84 aa7.19□□□□□ -1.26
HLA-F-230ENST00000606273 MIEN1Q9BRT3 115 aa7.19□□□□□ -1.26
HLA-F-230ENST00000606273 SPANXDQ9BXN6 97 aa7.19□□□□□ -1.26
HLA-F-230ENST00000606273 TMEM126AQ9H061 195 aa7.19□□□□□ -1.26
HLA-F-230ENST00000606273 SPANXCQ9NY87 97 aa7.19□□□□□ -1.26
HLA-F-230ENST00000606273 PAM16Q9Y3D7 125 aa7.19□□□□□ -1.26
HLA-F-230ENST00000606273 NDUFC2O95298 119 aa7.18□□□□□ -1.26
HLA-F-230ENST00000606273 KRTAP13-1Q8IUC0 172 aa7.18□□□□□ -1.26
HLA-F-230ENST00000606273 ZNF861PO60384 105 aa7.17□□□□□ -1.26
HLA-F-230ENST00000606273 COX8AP10176 69 aa7.17□□□□□ -1.26
HLA-F-230ENST00000606273 PRLHP81277 87 aa7.17□□□□□ -1.26
HLA-F-230ENST00000606273 SPATA45Q537H7 98 aa7.17□□□□□ -1.26
HLA-F-230ENST00000606273 DIRC1Q969H9 104 aa7.17□□□□□ -1.26
HLA-F-230ENST00000606273 C14orf144Q96I85 54 aa7.17□□□□□ -1.26
HLA-F-230ENST00000606273 SPANXB1Q9NS25 103 aaPredicted RBP7.17□□□□□ -1.26
HLA-F-230ENST00000606273 TRBV10-2A0A0K0K1G8 114 aa7.16□□□□□ -1.26
HLA-F-230ENST00000606273 H0Y9J4 135 aa7.16□□□□□ -1.26
HLA-F-230ENST00000606273 KRTAP5-11Q6L8G4 156 aa7.16□□□□□ -1.26
HLA-F-230ENST00000606273 MUSTN1Q8IVN3 82 aa7.16□□□□□ -1.26
HLA-F-230ENST00000606273 IGLV6-57P01721 117 aa7.15□□□□□ -1.26
HLA-F-230ENST00000606273 KRTAP1-4P0C5Y4 121 aa7.15□□□□□ -1.26
HLA-F-230ENST00000606273 DDTP30046 118 aa7.15□□□□□ -1.26
HLA-F-230ENST00000606273 SPRR1AP35321 89 aa7.15□□□□□ -1.26
HLA-F-230ENST00000606273 VAMP8Q9BV40 100 aa7.15□□□□□ -1.26
HLA-F-230ENST00000606273 KCNQ1DNQ9H478 68 aa7.15□□□□□ -1.26
HLA-F-230ENST00000606273 KRTAP4-16G5E9R7 235 aaPredicted RBP7.14□□□□□ -1.27
HLA-F-230ENST00000606273 FAM19A1Q7Z5A9 133 aa7.14□□□□□ -1.27
HLA-F-230ENST00000606273 LINC00337Q8N6G1 96 aa7.14□□□□□ -1.27
HLA-F-230ENST00000606273 PRYO14603 147 aa7.13□□□□□ -1.27
HLA-F-230ENST00000606273 DLEU1O43261 78 aa7.13□□□□□ -1.27
HLA-F-230ENST00000606273 UBE2AP49459 152 aa7.13□□□□□ -1.27
HLA-F-230ENST00000606273 KRTAP5-6Q6L8G9 129 aaPredicted RBP7.13□□□□□ -1.27
HLA-F-230ENST00000606273 TSPAN13O95857 204 aa7.12□□□□□ -1.27
HLA-F-230ENST00000606273 IFITM1P13164 125 aa7.12□□□□□ -1.27
HLA-F-230ENST00000606273 RPL28P46779 137 aaKnown RBP7.12□□□□□ -1.27
HLA-F-230ENST00000606273 LINC01547P58512 204 aaPredicted RBP7.12□□□□□ -1.27
HLA-F-230ENST00000606273 S100A7L2Q5SY68 101 aa7.12□□□□□ -1.27
HLA-F-230ENST00000606273 C2orf91Q6ZV80 131 aa7.12□□□□□ -1.27
HLA-F-230ENST00000606273 Q6ZVH6 145 aa7.12□□□□□ -1.27
HLA-F-230ENST00000606273 RPL13AP40429 203 aaKnown RBP7.11□□□□□ -1.27
HLA-F-230ENST00000606273 PPDPFQ9H3Y8 114 aa7.11□□□□□ -1.27
HLA-F-230ENST00000606273 OR13C6PQ8NH95 151 aa7.1□□□□□ -1.27
HLA-F-230ENST00000606273 ANAPC11Q9NYG5 84 aa7.1□□□□□ -1.27
HLA-F-230ENST00000606273 TRAV23DV6A0A075B6W5 121 aa7.09□□□□□ -1.27
HLA-F-230ENST00000606273 SLC25A34Q6PIV7 304 aa7.09□□□□□ -1.27
HLA-F-230ENST00000606273 A4D1N5 150 aa7.08□□□□□ -1.28
HLA-F-230ENST00000606273 SMCR5Q8TEV8 140 aa7.08□□□□□ -1.28
HLA-F-230ENST00000606273 HIGD2AQ9BW72 106 aa7.08□□□□□ -1.28
HLA-F-230ENST00000606273 ETDCA0A1B0GVM5 59 aa7.07□□□□□ -1.28
HLA-F-230ENST00000606273 ZNF73O43830 326 aaPredicted RBP7.07□□□□□ -1.28
HLA-F-230ENST00000606273 LINC00518Q8N0U6 118 aa7.07□□□□□ -1.28
HLA-F-230ENST00000606273 HIST1H4GQ99525 98 aa7.07□□□□□ -1.28
HLA-F-230ENST00000606273 Q9BRP9 147 aa7.07□□□□□ -1.28
HLA-F-230ENST00000606273 HIGD1BQ9P298 99 aa7.07□□□□□ -1.28
HLA-F-230ENST00000606273 ERC2-IT1O76042 136 aa7.06□□□□□ -1.28
HLA-F-230ENST00000606273 COPS9Q8WXC6 57 aa7.06□□□□□ -1.28
HLA-F-230ENST00000606273 A0A087X002 238 aa7.05□□□□□ -1.28
HLA-F-230ENST00000606273 LOC105371267A0A1B0GV96 52 aa7.05□□□□□ -1.28
HLA-F-230ENST00000606273 A6NDN8 102 aa7.05□□□□□ -1.28
HLA-F-230ENST00000606273 Q6ZRX8 168 aa7.05□□□□□ -1.28
HLA-F-230ENST00000606273 C12orf57Q99622 126 aa7.05□□□□□ -1.28
HLA-F-230ENST00000606273 S100A12P80511 92 aa7.04□□□□□ -1.28
HLA-F-230ENST00000606273 C6orf99Q4VX62 202 aa7.03□□□□□ -1.28
HLA-F-230ENST00000606273 TPRXLQ17RH7 258 aa7.02□□□□□ -1.29
HLA-F-230ENST00000606273 KRTAP13-2Q52LG2 175 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms