RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 NBASA2RRP1 2371 aa3.66□□□□□ -1.82
COL4A3BP-207ENST00000604926 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.66□□□□□ -1.82
COL4A3BP-207ENST00000604926 ODF3BA8MYP8 253 aa3.66□□□□□ -1.82
COL4A3BP-207ENST00000604926 DEFB119Q8N690 84 aa3.66□□□□□ -1.82
COL4A3BP-207ENST00000604926 IGKV3-7A0A075B6H7 116 aa3.65□□□□□ -1.82
COL4A3BP-207ENST00000604926 A0A1W2PNU3 283 aaPredicted RBP3.65□□□□□ -1.82
COL4A3BP-207ENST00000604926 COA5Q86WW8 74 aa3.65□□□□□ -1.82
COL4A3BP-207ENST00000604926 ATRQ13535 2644 aa3.65□□□□□ -1.83
COL4A3BP-207ENST00000604926 RPL39P62891 51 aaKnown RBP3.65□□□□□ -1.83
COL4A3BP-207ENST00000604926 C9orf163Q8N9P6 203 aa3.65□□□□□ -1.83
COL4A3BP-207ENST00000604926 CMYA5Q8N3K9 4069 aa3.65□□□□□ -1.83
COL4A3BP-207ENST00000604926 IGKV3OR2-268A0A0C4DH90 116 aa3.65□□□□□ -1.83
COL4A3BP-207ENST00000604926 IGKV4-1P06312 121 aa3.65□□□□□ -1.83
COL4A3BP-207ENST00000604926 RPL39LQ96EH5 51 aaKnown RBP3.65□□□□□ -1.83
COL4A3BP-207ENST00000604926 DNAH1Q9P2D7 4330 aa3.64□□□□□ -1.83
COL4A3BP-207ENST00000604926 LOC110117498A0A087WWA1 95 aa3.64□□□□□ -1.83
COL4A3BP-207ENST00000604926 M0R2N4 97 aa3.64□□□□□ -1.83
COL4A3BP-207ENST00000604926 KLK9Q2XQG4 91 aa3.64□□□□□ -1.83
COL4A3BP-207ENST00000604926 IGFL4Q6B9Z1 124 aa3.64□□□□□ -1.83
COL4A3BP-207ENST00000604926 WWC2-AS2Q96NR7 200 aa3.64□□□□□ -1.83
COL4A3BP-207ENST00000604926 PROK1P58294 105 aa3.64□□□□□ -1.83
COL4A3BP-207ENST00000604926 SUMO4Q6EEV6 95 aa3.64□□□□□ -1.83
COL4A3BP-207ENST00000604926 PANO1I0J062 215 aa3.63□□□□□ -1.83
COL4A3BP-207ENST00000604926 ZNF861PO60384 105 aa3.63□□□□□ -1.83
COL4A3BP-207ENST00000604926 PRCDQ00LT1 54 aa3.63□□□□□ -1.83
COL4A3BP-207ENST00000604926 C10orf55Q5SWW7 151 aa3.63□□□□□ -1.83
COL4A3BP-207ENST00000604926 Q8N9L7 120 aa3.63□□□□□ -1.83
COL4A3BP-207ENST00000604926 CCL18P55774 89 aa3.63□□□□□ -1.83
COL4A3BP-207ENST00000604926 C1orf137Q5JT78 98 aa3.63□□□□□ -1.83
COL4A3BP-207ENST00000604926 TRGV4A0A0C4DH28 118 aa3.63□□□□□ -1.83
COL4A3BP-207ENST00000604926 LINC00612Q8N6U2 182 aa3.63□□□□□ -1.83
COL4A3BP-207ENST00000604926 TRBV6-4A0A1B0GX49 114 aa3.62□□□□□ -1.83
COL4A3BP-207ENST00000604926 NUPR2A6NF83 97 aa3.62□□□□□ -1.83
COL4A3BP-207ENST00000604926 H3BQ85 93 aa3.62□□□□□ -1.83
COL4A3BP-207ENST00000604926 SPATA8Q6RVD6 105 aa3.62□□□□□ -1.83
COL4A3BP-207ENST00000604926 SMIM11BQ8TCY0 68 aa3.62□□□□□ -1.83
COL4A3BP-207ENST00000604926 ST20-AS1Q8NBB2 130 aa3.62□□□□□ -1.83
COL4A3BP-207ENST00000604926 SPRR4Q96PI1 79 aa3.62□□□□□ -1.83
COL4A3BP-207ENST00000604926 STAB1Q9NY15 2570 aa3.61□□□□□ -1.83
COL4A3BP-207ENST00000604926 TRGV2A0A075B6R0 118 aa3.61□□□□□ -1.83
COL4A3BP-207ENST00000604926 AKAP6Q13023 2319 aa3.61□□□□□ -1.83
COL4A3BP-207ENST00000604926 ETDCA0A1B0GVM5 59 aa3.61□□□□□ -1.83
COL4A3BP-207ENST00000604926 CCL3L1P16619 93 aa3.61□□□□□ -1.83
COL4A3BP-207ENST00000604926 KRTAP3-3Q9BYR6 98 aa3.61□□□□□ -1.83
COL4A3BP-207ENST00000604926 KRTAP3-2Q9BYR7 98 aa3.61□□□□□ -1.83
COL4A3BP-207ENST00000604926 KLK12Q9UKR0 248 aa3.61□□□□□ -1.83
COL4A3BP-207ENST00000604926 TLN2Q9Y4G6 2542 aa3.61□□□□□ -1.83
COL4A3BP-207ENST00000604926 SPENQ96T58 3664 aaKnown RBP3.61□□□□□ -1.83
COL4A3BP-207ENST00000604926 COL6A6A6NMZ7 2263 aa3.61□□□□□ -1.83
COL4A3BP-207ENST00000604926 DMAC1Q96GE9 116 aa3.6□□□□□ -1.83
COL4A3BP-207ENST00000604926 IGLV11-55A0A075B6I3 123 aa3.6□□□□□ -1.83
COL4A3BP-207ENST00000604926 PATE1Q8WXA2 126 aa3.6□□□□□ -1.83
COL4A3BP-207ENST00000604926 SPINT4Q6UDR6 99 aa3.6□□□□□ -1.83
COL4A3BP-207ENST00000604926 TENM4Q6N022 2769 aa3.59□□□□□ -1.83
COL4A3BP-207ENST00000604926 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.59□□□□□ -1.83
COL4A3BP-207ENST00000604926 CENPEQ02224 2701 aa3.59□□□□□ -1.83
COL4A3BP-207ENST00000604926 PDE6HQ13956 83 aa3.59□□□□□ -1.83
COL4A3BP-207ENST00000604926 KRTAP15-1Q3LI76 137 aa3.59□□□□□ -1.83
COL4A3BP-207ENST00000604926 Q5W150 140 aa3.59□□□□□ -1.84
COL4A3BP-207ENST00000604926 ANKHD1Q8IWZ3 2542 aaKnown RBP3.58□□□□□ -1.84
COL4A3BP-207ENST00000604926 SPTY2D1-AS1A0A0U1RR47 76 aa3.58□□□□□ -1.84
COL4A3BP-207ENST00000604926 DEFB124Q8NES8 71 aa3.58□□□□□ -1.84
COL4A3BP-207ENST00000604926 NDUFA1O15239 70 aa3.58□□□□□ -1.84
COL4A3BP-207ENST00000604926 MRGPRG-AS1Q2M3A8 158 aa3.58□□□□□ -1.84
COL4A3BP-207ENST00000604926 FBN3Q75N90 2809 aa3.57□□□□□ -1.84
COL4A3BP-207ENST00000604926 UQCR11O14957 56 aa3.57□□□□□ -1.84
COL4A3BP-207ENST00000604926 IGLV1-40P01703 118 aa3.57□□□□□ -1.84
COL4A3BP-207ENST00000604926 DEFB108BQ8NET1 73 aa3.57□□□□□ -1.84
COL4A3BP-207ENST00000604926 MAP1AP78559 2803 aaPredicted RBP3.57□□□□□ -1.84
COL4A3BP-207ENST00000604926 MRPL33O75394 65 aaKnown RBP3.57□□□□□ -1.84
COL4A3BP-207ENST00000604926 TOMM7Q9P0U1 55 aa3.57□□□□□ -1.84
COL4A3BP-207ENST00000604926 WT1-ASQ06250 92 aa3.56□□□□□ -1.84
COL4A3BP-207ENST00000604926 DEFB126Q9BYW3 111 aa3.56□□□□□ -1.84
COL4A3BP-207ENST00000604926 F8P00451 2351 aa3.56□□□□□ -1.84
COL4A3BP-207ENST00000604926 IGLV7-46A0A075B6I9 117 aa3.55□□□□□ -1.84
COL4A3BP-207ENST00000604926 LINC00158P58513 81 aa3.55□□□□□ -1.84
COL4A3BP-207ENST00000604926 LINC00472Q9H8W2 130 aa3.55□□□□□ -1.84
COL4A3BP-207ENST00000604926 ALMS1Q8TCU4 4167 aa3.55□□□□□ -1.84
COL4A3BP-207ENST00000604926 FAT2Q9NYQ8 4349 aa3.55□□□□□ -1.84
COL4A3BP-207ENST00000604926 A0A087WTM6 91 aa3.55□□□□□ -1.84
COL4A3BP-207ENST00000604926 KCNQ1DNQ9H478 68 aa3.55□□□□□ -1.84
COL4A3BP-207ENST00000604926 ROS1P08922 2347 aa3.55□□□□□ -1.84
COL4A3BP-207ENST00000604926 UTP20O75691 2785 aaKnown RBP3.55□□□□□ -1.84
COL4A3BP-207ENST00000604926 GIG44P09565 113 aaPredicted RBP3.55□□□□□ -1.84
COL4A3BP-207ENST00000604926 Q8N1X5 172 aa3.55□□□□□ -1.84
COL4A3BP-207ENST00000604926 ZNRD1Q9P1U0 126 aa3.55□□□□□ -1.84
COL4A3BP-207ENST00000604926 NOTCH3Q9UM47 2321 aa3.54□□□□□ -1.84
COL4A3BP-207ENST00000604926 CCDC168Q8NDH2 2452 aa3.54□□□□□ -1.84
COL4A3BP-207ENST00000604926 IGKV2-28A0A075B6P5 120 aa3.54□□□□□ -1.84
COL4A3BP-207ENST00000604926 IGKV2D-28P01615 120 aa3.54□□□□□ -1.84
COL4A3BP-207ENST00000604926 FLNAP21333 2647 aaKnown RBP3.54□□□□□ -1.84
COL4A3BP-207ENST00000604926 IGSF10Q6WRI0 2623 aa3.54□□□□□ -1.84
COL4A3BP-207ENST00000604926 DEFB114Q30KQ6 69 aa3.53□□□□□ -1.84
COL4A3BP-207ENST00000604926 CSMD1Q96PZ7 3565 aa3.53□□□□□ -1.84
COL4A3BP-207ENST00000604926 CSMD2Q7Z408 3487 aa3.52□□□□□ -1.85
COL4A3BP-207ENST00000604926 ADGRG4Q8IZF6 3080 aa3.52□□□□□ -1.85
COL4A3BP-207ENST00000604926 COX7BP24311 80 aa3.52□□□□□ -1.85
COL4A3BP-207ENST00000604926 C16orf74Q96GX8 76 aa3.52□□□□□ -1.85
COL4A3BP-207ENST00000604926 H3BRN7 92 aa3.51□□□□□ -1.85
COL4A3BP-207ENST00000604926 POLR2KP53803 58 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms