RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 LINC00588Q9Y4M8 146 aa7.64□□□□□ -1.19
ARHGEF1-220ENST00000600274 M0R2N4 97 aa7.64□□□□□ -1.19
ARHGEF1-220ENST00000600274 CRYGAP11844 174 aa7.64□□□□□ -1.19
ARHGEF1-220ENST00000600274 TRAV10A0A0B4J240 114 aa7.64□□□□□ -1.19
ARHGEF1-220ENST00000600274 LINC00474Q9P2X8 69 aa7.64□□□□□ -1.19
ARHGEF1-220ENST00000600274 COX7BP24311 80 aa7.63□□□□□ -1.19
ARHGEF1-220ENST00000600274 Q8N9L7 120 aa7.63□□□□□ -1.19
ARHGEF1-220ENST00000600274 RMI2Q96E14 147 aa7.63□□□□□ -1.19
ARHGEF1-220ENST00000600274 NDUFC2-KCTD14E9PQ53 114 aa7.62□□□□□ -1.19
ARHGEF1-220ENST00000600274 LINC01556Q5JQF7 62 aa7.62□□□□□ -1.19
ARHGEF1-220ENST00000600274 TMEM258P61165 79 aa7.62□□□□□ -1.19
ARHGEF1-220ENST00000600274 FAM168BA1KXE4 195 aa7.61□□□□□ -1.19
ARHGEF1-220ENST00000600274 IGLV6-57P01721 117 aa7.61□□□□□ -1.19
ARHGEF1-220ENST00000600274 UBE2DNLQ8IWF7 75 aa7.61□□□□□ -1.19
ARHGEF1-220ENST00000600274 H3BNG1 76 aa7.61□□□□□ -1.19
ARHGEF1-220ENST00000600274 IGKV2-24A0A0C4DH68 120 aa7.6□□□□□ -1.19
ARHGEF1-220ENST00000600274 VPREB1P12018 145 aa7.6□□□□□ -1.19
ARHGEF1-220ENST00000600274 SEC61GP60059 68 aa7.6□□□□□ -1.19
ARHGEF1-220ENST00000600274 KRTAP26-1Q6PEX3 210 aa7.6□□□□□ -1.19
ARHGEF1-220ENST00000600274 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.59□□□□□ -1.19
ARHGEF1-220ENST00000600274 C3orf84H3BNL1 204 aa7.59□□□□□ -1.19
ARHGEF1-220ENST00000600274 PSCAO43653 123 aa7.59□□□□□ -1.19
ARHGEF1-220ENST00000600274 PRR4Q16378 134 aa7.59□□□□□ -1.19
ARHGEF1-220ENST00000600274 SERTAD4-AS1Q5TG53 156 aa7.59□□□□□ -1.19
ARHGEF1-220ENST00000600274 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.58□□□□□ -1.2
ARHGEF1-220ENST00000600274 PRO0628Q9UI54 55 aa7.58□□□□□ -1.2
ARHGEF1-220ENST00000600274 F8WEM9 126 aa7.58□□□□□ -1.2
ARHGEF1-220ENST00000600274 M0R378 163 aa7.58□□□□□ -1.2
ARHGEF1-220ENST00000600274 GVQW2A0A096LPI5 108 aaPredicted RBP7.58□□□□□ -1.2
ARHGEF1-220ENST00000600274 COL7A1Q02388 2944 aa7.57□□□□□ -1.2
ARHGEF1-220ENST00000600274 Q6ZVQ6 151 aa7.57□□□□□ -1.2
ARHGEF1-220ENST00000600274 LINC01547P58512 204 aaPredicted RBP7.56□□□□□ -1.2
ARHGEF1-220ENST00000600274 CMYA5Q8N3K9 4069 aa7.56□□□□□ -1.2
ARHGEF1-220ENST00000600274 V9GYY9 64 aa7.56□□□□□ -1.2
ARHGEF1-220ENST00000600274 DNAH10OSP0CZ25 163 aa7.55□□□□□ -1.2
ARHGEF1-220ENST00000600274 Q5XG85 94 aa7.55□□□□□ -1.2
ARHGEF1-220ENST00000600274 C7orf33Q8WU49 177 aa7.55□□□□□ -1.2
ARHGEF1-220ENST00000600274 MDFIQ99750 246 aa7.54□□□□□ -1.2
ARHGEF1-220ENST00000600274 OBSCN-AS1Q96MR7 158 aa7.53□□□□□ -1.2
ARHGEF1-220ENST00000600274 TM2D3Q9BRN9 247 aa7.53□□□□□ -1.2
ARHGEF1-220ENST00000600274 NREPQ16612 68 aa7.53□□□□□ -1.2
ARHGEF1-220ENST00000600274 C1orf195Q5TG92 126 aa7.52□□□□□ -1.21
ARHGEF1-220ENST00000600274 LINC00167Q96N53 147 aa7.52□□□□□ -1.21
ARHGEF1-220ENST00000600274 LYSTQ99698 3801 aa7.52□□□□□ -1.21
ARHGEF1-220ENST00000600274 ELOF1P60002 83 aaKnown RBP7.52□□□□□ -1.21
ARHGEF1-220ENST00000600274 MUC7Q8TAX7 377 aa7.52□□□□□ -1.21
ARHGEF1-220ENST00000600274 ETDCA0A1B0GVM5 59 aa7.52□□□□□ -1.21
ARHGEF1-220ENST00000600274 UBE2BP63146 152 aa7.52□□□□□ -1.21
ARHGEF1-220ENST00000600274 Q6ZQT0 140 aa7.52□□□□□ -1.21
ARHGEF1-220ENST00000600274 ATP5EP2Q5VTU8 51 aa7.51□□□□□ -1.21
ARHGEF1-220ENST00000600274 HUWE1Q7Z6Z7 4374 aaKnown RBP7.51□□□□□ -1.21
ARHGEF1-220ENST00000600274 SRRM2Q9UQ35 2752 aaKnown RBP7.49□□□□□ -1.21
ARHGEF1-220ENST00000600274 BPY2O14599 106 aa7.49□□□□□ -1.21
ARHGEF1-220ENST00000600274 TRAV7A0A075B6U4 112 aa7.49□□□□□ -1.21
ARHGEF1-220ENST00000600274 ST20-AS1Q8NBB2 130 aa7.49□□□□□ -1.21
ARHGEF1-220ENST00000600274 KRTAP1-5Q9BYS1 174 aa7.49□□□□□ -1.21
ARHGEF1-220ENST00000600274 LINC00528Q8N1L1 170 aa7.48□□□□□ -1.21
ARHGEF1-220ENST00000600274 DNAH10Q8IVF4 4471 aa7.47□□□□□ -1.21
ARHGEF1-220ENST00000600274 FUSP35637 526 aaKnown RBP eCLIP7.47□□□□□ -1.21
ARHGEF1-220ENST00000600274 PSPHP1O15172 72 aa7.46□□□□□ -1.21
ARHGEF1-220ENST00000600274 CHTF8P0CG12 524 aa7.46□□□□□ -1.21
ARHGEF1-220ENST00000600274 HIGD2AQ9BW72 106 aa7.46□□□□□ -1.22
ARHGEF1-220ENST00000600274 FAM30AQ9NZY2 134 aa7.46□□□□□ -1.22
ARHGEF1-220ENST00000600274 A0A0G2JQZ4 141 aa7.45□□□□□ -1.22
ARHGEF1-220ENST00000600274 TRBV7-6A0A0J9YX20 115 aa7.45□□□□□ -1.22
ARHGEF1-220ENST00000600274 A0A1W2PNN7 141 aa7.45□□□□□ -1.22
ARHGEF1-220ENST00000600274 PRLHP81277 87 aa7.45□□□□□ -1.22
ARHGEF1-220ENST00000600274 MRPL55Q7Z7F7 128 aaKnown RBP7.44□□□□□ -1.22
ARHGEF1-220ENST00000600274 H7BZZ5 65 aa7.43□□□□□ -1.22
ARHGEF1-220ENST00000600274 TGP01266 2768 aa7.43□□□□□ -1.22
ARHGEF1-220ENST00000600274 A0A096LNI7 61 aa7.43□□□□□ -1.22
ARHGEF1-220ENST00000600274 DEFB116Q30KQ4 102 aa7.43□□□□□ -1.22
ARHGEF1-220ENST00000600274 ERC2-IT1O76042 136 aa7.42□□□□□ -1.22
ARHGEF1-220ENST00000600274 PDE6GP18545 87 aa7.42□□□□□ -1.22
ARHGEF1-220ENST00000600274 TMEM254Q8TBM7 123 aa7.41□□□□□ -1.22
ARHGEF1-220ENST00000600274 KCNQ1DNQ9H478 68 aa7.41□□□□□ -1.22
ARHGEF1-220ENST00000600274 Q8N377 158 aa7.41□□□□□ -1.22
ARHGEF1-220ENST00000600274 Q9BRP9 147 aa7.41□□□□□ -1.22
ARHGEF1-220ENST00000600274 SERP1Q9Y6X1 66 aa7.41□□□□□ -1.22
ARHGEF1-220ENST00000600274 LOC110117498A0A087WWA1 95 aa7.4□□□□□ -1.22
ARHGEF1-220ENST00000600274 FP248Q71RG6 208 aaPredicted RBP7.4□□□□□ -1.22
ARHGEF1-220ENST00000600274 KRTAP7-1Q8IUC3 87 aa7.4□□□□□ -1.22
ARHGEF1-220ENST00000600274 SPTSSBQ8NFR3 76 aa7.4□□□□□ -1.22
ARHGEF1-220ENST00000600274 IGLV1-50A0A075B6I6 118 aa7.4□□□□□ -1.23
ARHGEF1-220ENST00000600274 FAM229BQ4G0N7 80 aa7.4□□□□□ -1.23
ARHGEF1-220ENST00000600274 Q6ZRX8 168 aa7.4□□□□□ -1.23
ARHGEF1-220ENST00000600274 SMIM26A0A096LP01 95 aa7.39□□□□□ -1.23
ARHGEF1-220ENST00000600274 DNAH3Q8TD57 4116 aa7.39□□□□□ -1.23
ARHGEF1-220ENST00000600274 TRBV7-4A0A0J9YYF1 115 aa7.38□□□□□ -1.23
ARHGEF1-220ENST00000600274 REG3GQ6UW15 175 aa7.38□□□□□ -1.23
ARHGEF1-220ENST00000600274 PHF5AQ7RTV0 110 aaKnown RBP7.38□□□□□ -1.23
ARHGEF1-220ENST00000600274 DHRS4-AS1Q9P1J3 65 aa7.37□□□□□ -1.23
ARHGEF1-220ENST00000600274 C1orf137Q5JT78 98 aa7.36□□□□□ -1.23
ARHGEF1-220ENST00000600274 APLNQ9ULZ1 77 aa7.36□□□□□ -1.23
ARHGEF1-220ENST00000600274 H3BQ85 93 aa7.35□□□□□ -1.23
ARHGEF1-220ENST00000600274 PRYO14603 147 aa7.35□□□□□ -1.23
ARHGEF1-220ENST00000600274 TLX1NBP0CAT3 122 aa7.35□□□□□ -1.23
ARHGEF1-220ENST00000600274 WFDC13Q8IUB5 93 aa7.35□□□□□ -1.23
ARHGEF1-220ENST00000600274 CXCL6P80162 114 aa7.35□□□□□ -1.23
ARHGEF1-220ENST00000600274 SMIM29Q86T20 159 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 171.5 ms