RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 IGLV5-45A0A087WSX0 123 aa6.9□□□□□ -1.3
HOMER3-211ENST00000599808 TINCRA0A1B0GVN0 87 aa6.9□□□□□ -1.3
HOMER3-211ENST00000599808 SPINK8P0C7L1 97 aa6.9□□□□□ -1.3
HOMER3-211ENST00000599808 ZNF22P17026 224 aaPredicted RBP6.9□□□□□ -1.3
HOMER3-211ENST00000599808 HERVK_113P61574 105 aa6.9□□□□□ -1.3
HOMER3-211ENST00000599808 DAND5Q8N907 189 aa6.9□□□□□ -1.3
HOMER3-211ENST00000599808 SPRR4Q96PI1 79 aa6.9□□□□□ -1.3
HOMER3-211ENST00000599808 HIGD2AQ9BW72 106 aa6.9□□□□□ -1.3
HOMER3-211ENST00000599808 TMEM223A0PJW6 202 aa6.89□□□□□ -1.31
HOMER3-211ENST00000599808 PFN2P35080 140 aa6.89□□□□□ -1.31
HOMER3-211ENST00000599808 Q8NBF4 154 aa6.89□□□□□ -1.31
HOMER3-211ENST00000599808 TMEM170BQ5T4T1 132 aa6.88□□□□□ -1.31
HOMER3-211ENST00000599808 Q8NDZ9 215 aa6.88□□□□□ -1.31
HOMER3-211ENST00000599808 TTTY13Q9BZ97 58 aa6.88□□□□□ -1.31
HOMER3-211ENST00000599808 MYMXA0A1B0GTQ4 84 aa6.87□□□□□ -1.31
HOMER3-211ENST00000599808 LEPROTO15243 131 aa6.87□□□□□ -1.31
HOMER3-211ENST00000599808 HSD52Q0P140 79 aa6.87□□□□□ -1.31
HOMER3-211ENST00000599808 SND1-IT1Q9HBX3 110 aa6.87□□□□□ -1.31
HOMER3-211ENST00000599808 SPINK1P00995 79 aa6.86□□□□□ -1.31
HOMER3-211ENST00000599808 RPL24P83731 157 aaKnown RBP6.86□□□□□ -1.31
HOMER3-211ENST00000599808 KRTAP19-2Q3LHN2 52 aa6.86□□□□□ -1.31
HOMER3-211ENST00000599808 BVES-AS1Q5T3Y7 98 aa6.86□□□□□ -1.31
HOMER3-211ENST00000599808 J3QQQ9 107 aa6.85□□□□□ -1.31
HOMER3-211ENST00000599808 HINT1P49773 126 aaPredicted RBP6.85□□□□□ -1.31
HOMER3-211ENST00000599808 TSPEAR-AS2P59090 65 aa6.85□□□□□ -1.31
HOMER3-211ENST00000599808 MT1HP80294 61 aa6.85□□□□□ -1.31
HOMER3-211ENST00000599808 COL5A1-AS1Q5SY13 56 aa6.85□□□□□ -1.31
HOMER3-211ENST00000599808 ZNF815PA8K554 130 aa6.84□□□□□ -1.31
HOMER3-211ENST00000599808 H3BRM9 83 aa6.84□□□□□ -1.31
HOMER3-211ENST00000599808 TAL2Q16559 108 aa6.84□□□□□ -1.31
HOMER3-211ENST00000599808 XP32Q5T750 250 aa6.84□□□□□ -1.31
HOMER3-211ENST00000599808 IGLV5-39A0A0G2JS06 123 aa6.83□□□□□ -1.32
HOMER3-211ENST00000599808 BATFQ16520 125 aa6.83□□□□□ -1.32
HOMER3-211ENST00000599808 ERG28Q9UKR5 140 aa6.83□□□□□ -1.32
HOMER3-211ENST00000599808 ZNF706Q9Y5V0 76 aaPredicted RBP6.83□□□□□ -1.32
HOMER3-211ENST00000599808 LGALS3P17931 250 aaKnown RBP6.82□□□□□ -1.32
HOMER3-211ENST00000599808 Q8N377 158 aa6.82□□□□□ -1.32
HOMER3-211ENST00000599808 NDUFA12Q9UI09 145 aa6.82□□□□□ -1.32
HOMER3-211ENST00000599808 CFC1BP0CG36 223 aa6.81□□□□□ -1.32
HOMER3-211ENST00000599808 COX17Q14061 63 aa6.81□□□□□ -1.32
HOMER3-211ENST00000599808 SPANXB1Q9NS25 103 aaPredicted RBP6.81□□□□□ -1.32
HOMER3-211ENST00000599808 ZNF625Q96I27 306 aaPredicted RBP6.8□□□□□ -1.32
HOMER3-211ENST00000599808 A0A1B0GV90 55 aa6.79□□□□□ -1.32
HOMER3-211ENST00000599808 LORP23490 312 aaPredicted RBP6.79□□□□□ -1.32
HOMER3-211ENST00000599808 SCGB1D4Q6XE38 83 aa6.79□□□□□ -1.32
HOMER3-211ENST00000599808 CEND1Q8N111 149 aa6.79□□□□□ -1.32
HOMER3-211ENST00000599808 SMCR5Q8TEV8 140 aa6.79□□□□□ -1.32
HOMER3-211ENST00000599808 A6NDN8 102 aa6.78□□□□□ -1.32
HOMER3-211ENST00000599808 RPS29P62273 56 aaKnown RBP6.78□□□□□ -1.32
HOMER3-211ENST00000599808 LINC00483Q53H64 154 aa6.78□□□□□ -1.32
HOMER3-211ENST00000599808 A0A0J9YXY3 114 aa6.77□□□□□ -1.33
HOMER3-211ENST00000599808 TAX1BP3O14907 124 aa6.77□□□□□ -1.33
HOMER3-211ENST00000599808 FXYD2P54710 66 aa6.77□□□□□ -1.33
HOMER3-211ENST00000599808 KRTAP10-6P60371 365 aaPredicted RBP6.77□□□□□ -1.33
HOMER3-211ENST00000599808 MOBPQ13875 183 aa6.77□□□□□ -1.33
HOMER3-211ENST00000599808 HIST1H4GQ99525 98 aa6.77□□□□□ -1.33
HOMER3-211ENST00000599808 A0A1B0GWB2 263 aa6.76□□□□□ -1.33
HOMER3-211ENST00000599808 PRYO14603 147 aa6.76□□□□□ -1.33
HOMER3-211ENST00000599808 SLC25A20O43772 301 aa6.76□□□□□ -1.33
HOMER3-211ENST00000599808 TIMM17BO60830 172 aa6.76□□□□□ -1.33
HOMER3-211ENST00000599808 LITAFQ99732 161 aa6.76□□□□□ -1.33
HOMER3-211ENST00000599808 IGLV9-49A0A0B4J1Y8 123 aa6.75□□□□□ -1.33
HOMER3-211ENST00000599808 KRTAP4-16G5E9R7 235 aaPredicted RBP6.75□□□□□ -1.33
HOMER3-211ENST00000599808 SPRR1AP35321 89 aa6.75□□□□□ -1.33
HOMER3-211ENST00000599808 GAGE2AQ6NT46 116 aa6.75□□□□□ -1.33
HOMER3-211ENST00000599808 SSBP3-AS1Q7Z2R9 100 aa6.74□□□□□ -1.33
HOMER3-211ENST00000599808 SPANXDQ9BXN6 97 aa6.74□□□□□ -1.33
HOMER3-211ENST00000599808 SPANXCQ9NY87 97 aa6.74□□□□□ -1.33
HOMER3-211ENST00000599808 TMEM238LA0A1B0GVL6 79 aa6.73□□□□□ -1.33
HOMER3-211ENST00000599808 A6NJY4 79 aa6.73□□□□□ -1.33
HOMER3-211ENST00000599808 LINC00158P58513 81 aa6.73□□□□□ -1.33
HOMER3-211ENST00000599808 HERV-K104P63124 156 aa6.73□□□□□ -1.33
HOMER3-211ENST00000599808 PCOTHQ58A44 107 aa6.73□□□□□ -1.33
HOMER3-211ENST00000599808 Q6ZVH6 145 aa6.73□□□□□ -1.33
HOMER3-211ENST00000599808 KCNQ1DNQ9H478 68 aa6.73□□□□□ -1.33
HOMER3-211ENST00000599808 IGLV8-61A0A075B6I0 122 aa6.72□□□□□ -1.33
HOMER3-211ENST00000599808 A0A0U1RRA0 63 aa6.72□□□□□ -1.33
HOMER3-211ENST00000599808 ETDCA0A1B0GVM5 59 aa6.72□□□□□ -1.33
HOMER3-211ENST00000599808 SMIM13P0DJ93 91 aa6.72□□□□□ -1.33
HOMER3-211ENST00000599808 SFTA2Q6UW10 78 aa6.72□□□□□ -1.33
HOMER3-211ENST00000599808 NCR3O14931 201 aa6.71□□□□□ -1.34
HOMER3-211ENST00000599808 ERC2-IT1O76042 136 aa6.71□□□□□ -1.34
HOMER3-211ENST00000599808 NHP2Q9NX24 153 aaKnown RBP6.71□□□□□ -1.34
HOMER3-211ENST00000599808 C9orf118A6NHY6 69 aa6.7□□□□□ -1.34
HOMER3-211ENST00000599808 IFITM1P13164 125 aa6.7□□□□□ -1.34
HOMER3-211ENST00000599808 TRBV10-3A0A0K0K1G6 114 aa6.69□□□□□ -1.34
HOMER3-211ENST00000599808 B5MCH6 92 aa6.69□□□□□ -1.34
HOMER3-211ENST00000599808 K7ERJ3 54 aa6.69□□□□□ -1.34
HOMER3-211ENST00000599808 ADAMTSL4-AS1Q5T5F5 129 aa6.69□□□□□ -1.34
HOMER3-211ENST00000599808 MUSTN1Q8IVN3 82 aa6.69□□□□□ -1.34
HOMER3-211ENST00000599808 FLGP20930 4061 aaPredicted RBP6.68□□□□□ -1.34
HOMER3-211ENST00000599808 KRTAP9-7A8MTY7 169 aa6.68□□□□□ -1.34
HOMER3-211ENST00000599808 A0A0B4J2C4 111 aa6.67□□□□□ -1.34
HOMER3-211ENST00000599808 M0R2T5 61 aa6.67□□□□□ -1.34
HOMER3-211ENST00000599808 CFC1P0CG37 223 aa6.67□□□□□ -1.34
HOMER3-211ENST00000599808 COPS9Q8WXC6 57 aa6.67□□□□□ -1.34
HOMER3-211ENST00000599808 Q9BRP9 147 aa6.67□□□□□ -1.34
HOMER3-211ENST00000599808 A4D1N5 150 aa6.66□□□□□ -1.34
HOMER3-211ENST00000599808 C9orf92A6NGG3 77 aa6.66□□□□□ -1.34
HOMER3-211ENST00000599808 H3BUT2 72 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms