RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 LINC00528Q8N1L1 170 aa12.8□□□□□ -0.36
ARHGEF1-218ENST00000599589 C3orf84H3BNL1 204 aa12.79□□□□□ -0.36
ARHGEF1-218ENST00000599589 HIGD2BQ4VC39 106 aa12.79□□□□□ -0.36
ARHGEF1-218ENST00000599589 VWFP04275 2813 aa12.78□□□□□ -0.36
ARHGEF1-218ENST00000599589 HIGD2AQ9BW72 106 aa12.77□□□□□ -0.36
ARHGEF1-218ENST00000599589 M0R378 163 aa12.77□□□□□ -0.37
ARHGEF1-218ENST00000599589 FUSP35637 526 aaKnown RBP eCLIP12.77□□□□□ -0.37
ARHGEF1-218ENST00000599589 CAMK2N2Q96S95 79 aa12.76□□□□□ -0.37
ARHGEF1-218ENST00000599589 TENM1Q9UKZ4 2725 aa12.75□□□□□ -0.37
ARHGEF1-218ENST00000599589 Q6ZTC4 211 aa12.74□□□□□ -0.37
ARHGEF1-218ENST00000599589 ESRGQ1W209 222 aa12.73□□□□□ -0.37
ARHGEF1-218ENST00000599589 ATRQ13535 2644 aa12.72□□□□□ -0.37
ARHGEF1-218ENST00000599589 Q6ZRU5 148 aa12.71□□□□□ -0.37
ARHGEF1-218ENST00000599589 DEFB105AQ8NG35 78 aa12.71□□□□□ -0.37
ARHGEF1-218ENST00000599589 TEP1Q99973 2627 aaKnown RBP12.71□□□□□ -0.37
ARHGEF1-218ENST00000599589 FAM30AQ9NZY2 134 aa12.7□□□□□ -0.38
ARHGEF1-218ENST00000599589 EGFEM1PQ0D2K5 195 aa12.69□□□□□ -0.38
ARHGEF1-218ENST00000599589 Q8NAQ8 132 aa12.68□□□□□ -0.38
ARHGEF1-218ENST00000599589 SMIM29Q86T20 159 aa12.68□□□□□ -0.38
ARHGEF1-218ENST00000599589 SPART-AS1P0CW21 52 aa12.65□□□□□ -0.38
ARHGEF1-218ENST00000599589 Q8N377 158 aa12.65□□□□□ -0.38
ARHGEF1-218ENST00000599589 Q6ZRP5 223 aa12.64□□□□□ -0.39
ARHGEF1-218ENST00000599589 KPRPQ5T749 579 aaPredicted RBP12.63□□□□□ -0.39
ARHGEF1-218ENST00000599589 WFDC10BQ8IUB3 73 aa12.63□□□□□ -0.39
ARHGEF1-218ENST00000599589 C15orf56Q8N910 161 aa12.63□□□□□ -0.39
ARHGEF1-218ENST00000599589 F8P00451 2351 aa12.63□□□□□ -0.39
ARHGEF1-218ENST00000599589 C1orf195Q5TG92 126 aa12.62□□□□□ -0.39
ARHGEF1-218ENST00000599589 KRTAP26-1Q6PEX3 210 aa12.61□□□□□ -0.39
ARHGEF1-218ENST00000599589 IGLV5-48A0A075B6I7 105 aa12.61□□□□□ -0.39
ARHGEF1-218ENST00000599589 OXLD1Q5BKU9 147 aa12.6□□□□□ -0.39
ARHGEF1-218ENST00000599589 TRRAPQ9Y4A5 3859 aa12.6□□□□□ -0.39
ARHGEF1-218ENST00000599589 LRCOL1A6NCL2 159 aa12.6□□□□□ -0.39
ARHGEF1-218ENST00000599589 KRTAP24-1Q3LI83 254 aa12.6□□□□□ -0.39
ARHGEF1-218ENST00000599589 A0A1W2PNM2 257 aa12.58□□□□□ -0.39
ARHGEF1-218ENST00000599589 hDV103S1A0JD37 113 aa12.58□□□□□ -0.39
ARHGEF1-218ENST00000599589 KCNQ1DNQ9H478 68 aa12.58□□□□□ -0.4
ARHGEF1-218ENST00000599589 NKAPP1Q8N9T2 125 aa12.57□□□□□ -0.4
ARHGEF1-218ENST00000599589 LCE6AA0A183 80 aa12.56□□□□□ -0.4
ARHGEF1-218ENST00000599589 KRTAP10-11P60412 298 aa12.56□□□□□ -0.4
ARHGEF1-218ENST00000599589 SERTAD4-AS1Q5TG53 156 aa12.56□□□□□ -0.4
ARHGEF1-218ENST00000599589 C7orf33Q8WU49 177 aa12.55□□□□□ -0.4
ARHGEF1-218ENST00000599589 C1orf64Q8NEQ6 169 aa12.54□□□□□ -0.4
ARHGEF1-218ENST00000599589 FLNBO75369 2602 aaKnown RBP12.53□□□□□ -0.4
ARHGEF1-218ENST00000599589 F8WDY8 70 aa12.53□□□□□ -0.4
ARHGEF1-218ENST00000599589 C1orf137Q5JT78 98 aa12.53□□□□□ -0.4
ARHGEF1-218ENST00000599589 DSCR10P59022 87 aa12.5□□□□□ -0.41
ARHGEF1-218ENST00000599589 ZCCHC13Q8WW36 166 aaKnown RBP12.5□□□□□ -0.41
ARHGEF1-218ENST00000599589 V9GYY9 64 aa12.5□□□□□ -0.41
ARHGEF1-218ENST00000599589 RPL37AP8A6NKH3 93 aa12.5□□□□□ -0.41
ARHGEF1-218ENST00000599589 SYCNQ0VAF6 134 aa12.5□□□□□ -0.41
ARHGEF1-218ENST00000599589 ST20-AS1Q8NBB2 130 aa12.5□□□□□ -0.41
ARHGEF1-218ENST00000599589 Q9BRP9 147 aa12.5□□□□□ -0.41
ARHGEF1-218ENST00000599589 A0A1B0GW54 56 aa12.49□□□□□ -0.41
ARHGEF1-218ENST00000599589 K7EQZ3 153 aa12.49□□□□□ -0.41
ARHGEF1-218ENST00000599589 ETDCA0A1B0GVM5 59 aa12.49□□□□□ -0.41
ARHGEF1-218ENST00000599589 TNP2Q05952 138 aa12.49□□□□□ -0.41
ARHGEF1-218ENST00000599589 Q8NBF4 154 aa12.49□□□□□ -0.41
ARHGEF1-218ENST00000599589 Q6ZRX8 168 aa12.48□□□□□ -0.41
ARHGEF1-218ENST00000599589 DHRS4-AS1Q9P1J3 65 aa12.48□□□□□ -0.41
ARHGEF1-218ENST00000599589 RETNQ9HD89 108 aa12.48□□□□□ -0.41
ARHGEF1-218ENST00000599589 IGKV2D-24A0A075B6R9 120 aa12.47□□□□□ -0.41
ARHGEF1-218ENST00000599589 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.47□□□□□ -0.41
ARHGEF1-218ENST00000599589 Q1T7F1 81 aa12.47□□□□□ -0.41
ARHGEF1-218ENST00000599589 PRR4Q16378 134 aa12.46□□□□□ -0.42
ARHGEF1-218ENST00000599589 SPRR4Q96PI1 79 aa12.44□□□□□ -0.42
ARHGEF1-218ENST00000599589 FAM168BA1KXE4 195 aa12.43□□□□□ -0.42
ARHGEF1-218ENST00000599589 KRTAP4-16G5E9R7 235 aaPredicted RBP12.43□□□□□ -0.42
ARHGEF1-218ENST00000599589 H3BNG1 76 aa12.42□□□□□ -0.42
ARHGEF1-218ENST00000599589 PSPHP1O15172 72 aa12.42□□□□□ -0.42
ARHGEF1-218ENST00000599589 PRR15Q8IV56 129 aa12.42□□□□□ -0.42
ARHGEF1-218ENST00000599589 FBN1P35555 2871 aaKnown RBP12.41□□□□□ -0.42
ARHGEF1-218ENST00000599589 PKD1L1Q8TDX9 2849 aa12.4□□□□□ -0.42
ARHGEF1-218ENST00000599589 IGLV1-50A0A075B6I6 118 aa12.4□□□□□ -0.43
ARHGEF1-218ENST00000599589 HCG22E2RYF7 251 aa12.39□□□□□ -0.43
ARHGEF1-218ENST00000599589 PRB2P02812 416 aaPredicted RBP12.38□□□□□ -0.43
ARHGEF1-218ENST00000599589 SEC61GP60059 68 aa12.38□□□□□ -0.43
ARHGEF1-218ENST00000599589 TRAV22A0A0B4J277 110 aa12.38□□□□□ -0.43
ARHGEF1-218ENST00000599589 CYP4F30PQ9H0H9 118 aa12.37□□□□□ -0.43
ARHGEF1-218ENST00000599589 SPRR1AP35321 89 aa12.37□□□□□ -0.43
ARHGEF1-218ENST00000599589 A0A0G2JQZ4 141 aa12.36□□□□□ -0.43
ARHGEF1-218ENST00000599589 A0A1W2PNN7 141 aa12.36□□□□□ -0.43
ARHGEF1-218ENST00000599589 STAB1Q9NY15 2570 aa12.36□□□□□ -0.43
ARHGEF1-218ENST00000599589 PSCAO43653 123 aa12.35□□□□□ -0.43
ARHGEF1-218ENST00000599589 PLA2G2DQ9UNK4 145 aa12.35□□□□□ -0.43
ARHGEF1-218ENST00000599589 DEFB116Q30KQ4 102 aa12.34□□□□□ -0.43
ARHGEF1-218ENST00000599589 UBE2BP63146 152 aa12.34□□□□□ -0.43
ARHGEF1-218ENST00000599589 LINC01556Q5JQF7 62 aa12.33□□□□□ -0.44
ARHGEF1-218ENST00000599589 KRTAP7-1Q8IUC3 87 aa12.33□□□□□ -0.44
ARHGEF1-218ENST00000599589 TLX1NBP0CAT3 122 aa12.32□□□□□ -0.44
ARHGEF1-218ENST00000599589 WFDC13Q8IUB5 93 aa12.32□□□□□ -0.44
ARHGEF1-218ENST00000599589 C11orf45Q8TAV5 145 aa12.32□□□□□ -0.44
ARHGEF1-218ENST00000599589 LINC00476Q8WZB0 136 aa12.32□□□□□ -0.44
ARHGEF1-218ENST00000599589 CMYA5Q8N3K9 4069 aa12.31□□□□□ -0.44
ARHGEF1-218ENST00000599589 IGLV5-37A0A075B6J1 123 aa12.3□□□□□ -0.44
ARHGEF1-218ENST00000599589 DEFB131BA0A096LNP1 70 aa12.3□□□□□ -0.44
ARHGEF1-218ENST00000599589 PMAIP1Q13794 54 aa12.29□□□□□ -0.44
ARHGEF1-218ENST00000599589 NDUFB1O75438 58 aa12.28□□□□□ -0.44
ARHGEF1-218ENST00000599589 A8MUN3 132 aa12.28□□□□□ -0.44
ARHGEF1-218ENST00000599589 MAST4O15021 2626 aa12.27□□□□□ -0.44
ARHGEF1-218ENST00000599589 MRPL55Q7Z7F7 128 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms