RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 MIR7-3HGQ8N6C7 128 aa8.86□□□□□ -0.99
SMG9-208ENST00000598886 ZNF706Q9Y5V0 76 aaPredicted RBP8.86□□□□□ -0.99
SMG9-208ENST00000598886 TSPEAR-AS2P59090 65 aa8.85□□□□□ -0.99
SMG9-208ENST00000598886 DAND5Q8N907 189 aa8.85□□□□□ -0.99
SMG9-208ENST00000598886 Q8NBF4 154 aa8.85□□□□□ -0.99
SMG9-208ENST00000598886 TRBV10-3A0A0K0K1G6 114 aa8.84□□□□□ -0.99
SMG9-208ENST00000598886 ANKRD39Q53RE8 183 aa8.84□□□□□ -0.99
SMG9-208ENST00000598886 PRO1933Q9H354 126 aa8.84□□□□□ -0.99
SMG9-208ENST00000598886 LOC107984156A0A0G2JMH3 177 aa8.83□□□□□ -1
SMG9-208ENST00000598886 HERV-K104P63124 156 aa8.83□□□□□ -1
SMG9-208ENST00000598886 ARL17AQ8IVW1 177 aa8.83□□□□□ -1
SMG9-208ENST00000598886 MIEN1Q9BRT3 115 aa8.82□□□□□ -1
SMG9-208ENST00000598886 KRTAP4-1Q9BYQ7 146 aa8.82□□□□□ -1
SMG9-208ENST00000598886 UQCR10Q9UDW1 63 aa8.82□□□□□ -1
SMG9-208ENST00000598886 NDUFA12Q9UI09 145 aa8.82□□□□□ -1
SMG9-208ENST00000598886 B5MCH6 92 aa8.81□□□□□ -1
SMG9-208ENST00000598886 ERC2-IT1O76042 136 aa8.81□□□□□ -1
SMG9-208ENST00000598886 COX8AP10176 69 aa8.81□□□□□ -1
SMG9-208ENST00000598886 DDTP30046 118 aa8.81□□□□□ -1
SMG9-208ENST00000598886 HERVK_113P61574 105 aa8.81□□□□□ -1
SMG9-208ENST00000598886 MEIG1Q5JSS6 88 aa8.81□□□□□ -1
SMG9-208ENST00000598886 PCP4L1A6NKN8 68 aa8.8□□□□□ -1
SMG9-208ENST00000598886 E9PLD3 99 aa8.8□□□□□ -1
SMG9-208ENST00000598886 ASB16-AS1Q495Z4 193 aa8.8□□□□□ -1
SMG9-208ENST00000598886 Q9BRP9 147 aa8.8□□□□□ -1
SMG9-208ENST00000598886 ETDCA0A1B0GVM5 59 aa8.79□□□□□ -1
SMG9-208ENST00000598886 DLEU1O43261 78 aa8.79□□□□□ -1
SMG9-208ENST00000598886 SPINK1P00995 79 aa8.79□□□□□ -1
SMG9-208ENST00000598886 SLC25A34Q6PIV7 304 aa8.79□□□□□ -1
SMG9-208ENST00000598886 C14orf144Q96I85 54 aa8.78□□□□□ -1
SMG9-208ENST00000598886 TRBV10-2A0A0K0K1G8 114 aa8.77□□□□□ -1.01
SMG9-208ENST00000598886 MYMXA0A1B0GTQ4 84 aa8.77□□□□□ -1.01
SMG9-208ENST00000598886 NMUP48645 174 aa8.77□□□□□ -1.01
SMG9-208ENST00000598886 RPS29P62273 56 aaKnown RBP8.77□□□□□ -1.01
SMG9-208ENST00000598886 Q8N377 158 aa8.77□□□□□ -1.01
SMG9-208ENST00000598886 LINC00587B1AMM8 73 aa8.76□□□□□ -1.01
SMG9-208ENST00000598886 LEPROTO15243 131 aa8.76□□□□□ -1.01
SMG9-208ENST00000598886 C4orf48Q5BLP8 95 aa8.76□□□□□ -1.01
SMG9-208ENST00000598886 Q6ZRX8 168 aa8.76□□□□□ -1.01
SMG9-208ENST00000598886 GAGE2AQ6NT46 116 aa8.75□□□□□ -1.01
SMG9-208ENST00000598886 KRTAP9-6A0A140TA67 174 aa8.74□□□□□ -1.01
SMG9-208ENST00000598886 EIF4EBP3O60516 100 aaPredicted RBP8.74□□□□□ -1.01
SMG9-208ENST00000598886 IGLV6-57P01721 117 aa8.74□□□□□ -1.01
SMG9-208ENST00000598886 MOBPQ13875 183 aa8.74□□□□□ -1.01
SMG9-208ENST00000598886 PCP2Q8IVA1 136 aa8.74□□□□□ -1.01
SMG9-208ENST00000598886 J3QQQ9 107 aa8.72□□□□□ -1.01
SMG9-208ENST00000598886 SOSTDC1Q6X4U4 206 aa8.72□□□□□ -1.01
SMG9-208ENST00000598886 C2orf91Q6ZV80 131 aa8.72□□□□□ -1.01
SMG9-208ENST00000598886 SSBP3-AS1Q7Z2R9 100 aa8.72□□□□□ -1.01
SMG9-208ENST00000598886 SPANXB1Q9NS25 103 aaPredicted RBP8.72□□□□□ -1.01
SMG9-208ENST00000598886 HIGD1BQ9P298 99 aa8.72□□□□□ -1.01
SMG9-208ENST00000598886 IGLV9-49A0A0B4J1Y8 123 aa8.71□□□□□ -1.02
SMG9-208ENST00000598886 NDUFC2O95298 119 aa8.71□□□□□ -1.02
SMG9-208ENST00000598886 LGALS3P17931 250 aaKnown RBP8.7□□□□□ -1.02
SMG9-208ENST00000598886 ZNF815PA8K554 130 aa8.69□□□□□ -1.02
SMG9-208ENST00000598886 XP32Q5T750 250 aa8.69□□□□□ -1.02
SMG9-208ENST00000598886 TTTY13Q9BZ97 58 aa8.69□□□□□ -1.02
SMG9-208ENST00000598886 ADAMTSL4-AS1Q5T5F5 129 aa8.68□□□□□ -1.02
SMG9-208ENST00000598886 SLC25A20O43772 301 aa8.67□□□□□ -1.02
SMG9-208ENST00000598886 TRAV23DV6A0A075B6W5 121 aa8.66□□□□□ -1.02
SMG9-208ENST00000598886 SEC61BP60468 96 aaKnown RBP8.66□□□□□ -1.02
SMG9-208ENST00000598886 LCE2CQ5TA81 110 aa8.66□□□□□ -1.02
SMG9-208ENST00000598886 A0A0J9YXY3 114 aa8.65□□□□□ -1.02
SMG9-208ENST00000598886 HSD52Q0P140 79 aa8.65□□□□□ -1.02
SMG9-208ENST00000598886 ST20-AS1Q8NBB2 130 aa8.65□□□□□ -1.02
SMG9-208ENST00000598886 M0R143 59 aa8.64□□□□□ -1.03
SMG9-208ENST00000598886 ZNF73O43830 326 aaPredicted RBP8.64□□□□□ -1.03
SMG9-208ENST00000598886 TAL2Q16559 108 aa8.64□□□□□ -1.03
SMG9-208ENST00000598886 KRTAP19-2Q3LHN2 52 aa8.64□□□□□ -1.03
SMG9-208ENST00000598886 LITAFQ99732 161 aa8.64□□□□□ -1.03
SMG9-208ENST00000598886 S100A7L2Q5SY68 101 aa8.63□□□□□ -1.03
SMG9-208ENST00000598886 SCGB1D4Q6XE38 83 aa8.63□□□□□ -1.03
SMG9-208ENST00000598886 SPRR1BP22528 89 aa8.62□□□□□ -1.03
SMG9-208ENST00000598886 NPC2P61916 151 aa8.62□□□□□ -1.03
SMG9-208ENST00000598886 SNHG12Q9BXW3 62 aa8.62□□□□□ -1.03
SMG9-208ENST00000598886 TIMM17BO60830 172 aa8.61□□□□□ -1.03
SMG9-208ENST00000598886 LINC01547P58512 204 aaPredicted RBP8.61□□□□□ -1.03
SMG9-208ENST00000598886 LCE2DQ5TA82 110 aaPredicted RBP8.61□□□□□ -1.03
SMG9-208ENST00000598886 BVES-AS1Q5T3Y7 98 aa8.6□□□□□ -1.03
SMG9-208ENST00000598886 C9orf153Q5TBE3 101 aa8.6□□□□□ -1.03
SMG9-208ENST00000598886 HINT1P49773 126 aaPredicted RBP8.59□□□□□ -1.03
SMG9-208ENST00000598886 CEND1Q8N111 149 aa8.58□□□□□ -1.04
SMG9-208ENST00000598886 Q6ZVH6 145 aa8.57□□□□□ -1.04
SMG9-208ENST00000598886 LINC00308Q8TCZ7 52 aa8.57□□□□□ -1.04
SMG9-208ENST00000598886 HIST1H4GQ99525 98 aa8.57□□□□□ -1.04
SMG9-208ENST00000598886 SPANXDQ9BXN6 97 aa8.57□□□□□ -1.04
SMG9-208ENST00000598886 SPANXCQ9NY87 97 aa8.57□□□□□ -1.04
SMG9-208ENST00000598886 FSIP2Q5CZC0 6907 aa8.55□□□□□ -1.04
SMG9-208ENST00000598886 BATFQ16520 125 aa8.55□□□□□ -1.04
SMG9-208ENST00000598886 COL5A1-AS1Q5SY13 56 aa8.55□□□□□ -1.04
SMG9-208ENST00000598886 A6NDN8 102 aa8.53□□□□□ -1.04
SMG9-208ENST00000598886 FXYD2P54710 66 aa8.53□□□□□ -1.04
SMG9-208ENST00000598886 TMEM238LA0A1B0GVL6 79 aa8.52□□□□□ -1.05
SMG9-208ENST00000598886 A6NJY4 79 aa8.52□□□□□ -1.05
SMG9-208ENST00000598886 IFITM1P13164 125 aa8.52□□□□□ -1.05
SMG9-208ENST00000598886 ELOF1P60002 83 aaKnown RBP8.52□□□□□ -1.05
SMG9-208ENST00000598886 COPS9Q8WXC6 57 aa8.52□□□□□ -1.05
SMG9-208ENST00000598886 DHRS4-AS1Q9P1J3 65 aa8.52□□□□□ -1.05
SMG9-208ENST00000598886 A0A1B0GWB2 263 aa8.51□□□□□ -1.05
SMG9-208ENST00000598886 CBY1Q9Y3M2 126 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms