RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 USMG5Q96IX5 58 aa2.27□□□□□ -2.05
PAF1-208ENST00000598594 CDKN2A-AS1Q9UH64 79 aa2.27□□□□□ -2.05
PAF1-208ENST00000598594 I3L2K1 104 aa2.26□□□□□ -2.05
PAF1-208ENST00000598594 FXYD6P3P58550 94 aa2.26□□□□□ -2.05
PAF1-208ENST00000598594 KRTAP13-3Q3SY46 172 aa2.26□□□□□ -2.05
PAF1-208ENST00000598594 DOPEY2Q9Y3R5 2298 aa2.26□□□□□ -2.05
PAF1-208ENST00000598594 CACNA1EQ15878 2313 aa2.25□□□□□ -2.05
PAF1-208ENST00000598594 K7EQZ3 153 aa2.25□□□□□ -2.05
PAF1-208ENST00000598594 LINC00158P58513 81 aa2.25□□□□□ -2.05
PAF1-208ENST00000598594 PIGYQ3MUY2 71 aa2.25□□□□□ -2.05
PAF1-208ENST00000598594 MRPL34Q9BQ48 92 aaKnown RBP2.25□□□□□ -2.05
PAF1-208ENST00000598594 CNTRLQ7Z7A1 2325 aa2.24□□□□□ -2.05
PAF1-208ENST00000598594 LYNX1P0DP58 116 aa2.24□□□□□ -2.05
PAF1-208ENST00000598594 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
PAF1-208ENST00000598594 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.24□□□□□ -2.053e-13■■■■□ 19.9
PAF1-208ENST00000598594 Q8IZM0 81 aa2.23□□□□□ -2.05
PAF1-208ENST00000598594 DEFB123Q8N688 67 aa2.23□□□□□ -2.05
PAF1-208ENST00000598594 COL6A6A6NMZ7 2263 aa2.22□□□□□ -2.05
PAF1-208ENST00000598594 KRTAP10-10P60014 251 aa2.22□□□□□ -2.05
PAF1-208ENST00000598594 PRO3102Q9H379 93 aa2.22□□□□□ -2.05
PAF1-208ENST00000598594 LOC730098B7Z3J9 87 aa2.21□□□□□ -2.06
PAF1-208ENST00000598594 TMEM167BQ9NRX6 74 aa2.21□□□□□ -2.06
PAF1-208ENST00000598594 FAM208BQ5VWN6 2430 aa2.21□□□□□ -2.06
PAF1-208ENST00000598594 SORL1Q92673 2214 aa2.21□□□□□ -2.06
PAF1-208ENST00000598594 LINC00308Q8TCZ7 52 aa2.19□□□□□ -2.06
PAF1-208ENST00000598594 KRTAP4-3Q9BYR4 195 aa2.19□□□□□ -2.06
PAF1-208ENST00000598594 JMJD1CQ15652 2540 aa2.18□□□□□ -2.06
PAF1-208ENST00000598594 COX6B2Q6YFQ2 88 aa2.18□□□□□ -2.06
PAF1-208ENST00000598594 DEFB119Q8N690 84 aa2.18□□□□□ -2.06
PAF1-208ENST00000598594 CLTCL1P53675 1640 aa2.17□□□□□ -2.06
PAF1-208ENST00000598594 PLCE1Q9P212 2302 aa2.17□□□□□ -2.06
PAF1-208ENST00000598594 CCL22O00626 93 aa2.17□□□□□ -2.06
PAF1-208ENST00000598594 CNFNQ9BYD5 112 aa2.17□□□□□ -2.06
PAF1-208ENST00000598594 OTOGLQ3ZCN5 2332 aa2.17□□□□□ -2.06
PAF1-208ENST00000598594 COX6A2Q02221 97 aa2.16□□□□□ -2.06
PAF1-208ENST00000598594 PRB3Q04118 309 aaPredicted RBP2.16□□□□□ -2.06
PAF1-208ENST00000598594 TFF3Q07654 80 aa2.15□□□□□ -2.07
PAF1-208ENST00000598594 KRTAP6-3Q3LI67 103 aa2.15□□□□□ -2.07
PAF1-208ENST00000598594 LYNX1G3V0Z9 82 aa2.14□□□□□ -2.07
PAF1-208ENST00000598594 C10orf95Q9H7T3 257 aa2.14□□□□□ -2.07
PAF1-208ENST00000598594 PRO0255Q9UI72 69 aa2.14□□□□□ -2.07
PAF1-208ENST00000598594 H0YAA0 97 aa2.13□□□□□ -2.07
PAF1-208ENST00000598594 FBN1P35555 2871 aaKnown RBP2.12□□□□□ -2.07
PAF1-208ENST00000598594 MINOS1Q5TGZ0 78 aa2.12□□□□□ -2.07
PAF1-208ENST00000598594 LELP1Q5T871 98 aa2.11□□□□□ -2.07
PAF1-208ENST00000598594 KRTAP13-1Q8IUC0 172 aa2.1□□□□□ -2.07
PAF1-208ENST00000598594 KRTAP5-2Q701N4 177 aa2.09□□□□□ -2.07
PAF1-208ENST00000598594 SMIM2Q9BVW6 85 aa2.09□□□□□ -2.07
PAF1-208ENST00000598594 NOTCH2Q04721 2471 aa2.09□□□□□ -2.08
PAF1-208ENST00000598594 TRIOBPQ9H2D6 2365 aa2.08□□□□□ -2.08
PAF1-208ENST00000598594 PIEZO2Q9H5I5 2752 aa2.08□□□□□ -2.08
PAF1-208ENST00000598594 KRTAP12-4P60329 112 aa2.08□□□□□ -2.08
PAF1-208ENST00000598594 SPINK9Q5DT21 86 aa2.08□□□□□ -2.08
PAF1-208ENST00000598594 C6orf48Q9UBA6 75 aa2.08□□□□□ -2.08
PAF1-208ENST00000598594 PTPRQQ9UMZ3 2332 aa2.08□□□□□ -2.08
PAF1-208ENST00000598594 PTPRZ1P23471 2315 aaPredicted RBP2.07□□□□□ -2.08
PAF1-208ENST00000598594 USF3Q68DE3 2245 aa2.07□□□□□ -2.08
PAF1-208ENST00000598594 LCE3DQ9BYE3 92 aa2.06□□□□□ -2.08
PAF1-208ENST00000598594 APLNQ9ULZ1 77 aa2.06□□□□□ -2.08
PAF1-208ENST00000598594 NDUFA1O15239 70 aa2.05□□□□□ -2.08
PAF1-208ENST00000598594 SPRR1AP35321 89 aa2.05□□□□□ -2.08
PAF1-208ENST00000598594 H1FX-AS1Q4G0G2 97 aa2.05□□□□□ -2.08
PAF1-208ENST00000598594 ALMS1Q8TCU4 4167 aa2.03□□□□□ -2.08
PAF1-208ENST00000598594 J3QKU1 62 aa2.02□□□□□ -2.09
PAF1-208ENST00000598594 IAPPP10997 89 aa2.02□□□□□ -2.09
PAF1-208ENST00000598594 Q6ZSA8 131 aa2.02□□□□□ -2.09
PAF1-208ENST00000598594 WFDC13Q8IUB5 93 aa2.02□□□□□ -2.09
PAF1-208ENST00000598594 DEFB105AQ8NG35 78 aa2.02□□□□□ -2.09
PAF1-208ENST00000598594 ROS1P08922 2347 aa2.02□□□□□ -2.09
PAF1-208ENST00000598594 LCE3AQ5TA76 89 aa2.01□□□□□ -2.09
PAF1-208ENST00000598594 Q5VSD8 79 aa2.01□□□□□ -2.09
PAF1-208ENST00000598594 RP1L1Q8IWN7 2480 aaPredicted RBP1.99□□□□□ -2.09
PAF1-208ENST00000598594 DEFB130BP0DP73 79 aa1.98□□□□□ -2.09
PAF1-208ENST00000598594 DEFB130AP0DP74 79 aa1.98□□□□□ -2.09
PAF1-208ENST00000598594 RPS27P42677 84 aaKnown RBP1.98□□□□□ -2.09
PAF1-208ENST00000598594 RPS27LQ71UM5 84 aaKnown RBP1.98□□□□□ -2.09
PAF1-208ENST00000598594 A0A0D9SG42 100 aa1.97□□□□□ -2.09
PAF1-208ENST00000598594 SPRR1BP22528 89 aa1.97□□□□□ -2.09
PAF1-208ENST00000598594 C2CD3Q4AC94 2353 aa1.96□□□□□ -2.1
PAF1-208ENST00000598594 WFDC10BQ8IUB3 73 aa1.94□□□□□ -2.1
PAF1-208ENST00000598594 PKDREJQ9NTG1 2253 aa1.94□□□□□ -2.1
PAF1-208ENST00000598594 KLK9Q2XQG4 91 aa1.93□□□□□ -2.1
PAF1-208ENST00000598594 ASH1LQ9NR48 2969 aaKnown RBP1.93□□□□□ -2.1
PAF1-208ENST00000598594 ZNF462Q96JM2 2506 aa1.92□□□□□ -2.1
PAF1-208ENST00000598594 WNK2Q9Y3S1 2297 aa1.9□□□□□ -2.11
PAF1-208ENST00000598594 KAAG1Q9UBP8 84 aa1.89□□□□□ -2.11
PAF1-208ENST00000598594 PDE4DIPQ5VU43 2346 aa1.88□□□□□ -2.11
PAF1-208ENST00000598594 WT1-ASQ06250 92 aa1.88□□□□□ -2.11
PAF1-208ENST00000598594 IGF2RP11717 2491 aa1.88□□□□□ -2.11
PAF1-208ENST00000598594 KRTAP12-3P60328 96 aa1.87□□□□□ -2.11
PAF1-208ENST00000598594 KNL1Q8NG31 2342 aa1.87□□□□□ -2.11
PAF1-208ENST00000598594 KRTAP5-5Q701N2 237 aaPredicted RBP1.85□□□□□ -2.11
PAF1-208ENST00000598594 SPTBN2O15020 2390 aa1.84□□□□□ -2.11
PAF1-208ENST00000598594 CACNA1HO95180 2353 aa1.84□□□□□ -2.11
PAF1-208ENST00000598594 IGLV5-48A0A075B6I7 105 aa1.83□□□□□ -2.12
PAF1-208ENST00000598594 PCNX1Q96RV3 2341 aa1.82□□□□□ -2.12
PAF1-208ENST00000598594 H3BUA1 57 aa1.82□□□□□ -2.12
PAF1-208ENST00000598594 KRTAP10-4P60372 401 aaPredicted RBP1.82□□□□□ -2.12
PAF1-208ENST00000598594 SPTBN1Q01082 2364 aaKnown RBP1.82□□□□□ -2.12
PAF1-208ENST00000598594 TPRP12270 2363 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms