RNA–Protein interactions for RNA: ENST00000597507.1

C19orf54-207, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 947 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-207ENST00000597507 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.71□□□□□ -1.02
C19orf54-207ENST00000597507 TMEM170BQ5T4T1 132 aa8.71□□□□□ -1.02
C19orf54-207ENST00000597507 HIST1H2BHQ93079 126 aa8.71□□□□□ -1.02
C19orf54-207ENST00000597507 HIST1H2BNQ99877 126 aa8.71□□□□□ -1.02
C19orf54-207ENST00000597507 HIST1H2BMQ99879 126 aa8.71□□□□□ -1.02
C19orf54-207ENST00000597507 TRAV12-1A0A0B4J245 112 aa8.7□□□□□ -1.02
C19orf54-207ENST00000597507 HSPB8Q9UJY1 196 aa8.7□□□□□ -1.02
C19orf54-207ENST00000597507 CHTOPQ9Y3Y2 248 aaKnown RBP8.7□□□□□ -1.02
C19orf54-207ENST00000597507 H0Y8G0 127 aa8.69□□□□□ -1.02
C19orf54-207ENST00000597507 IGLV6-57P01721 117 aa8.69□□□□□ -1.02
C19orf54-207ENST00000597507 MIR7-3HGQ8N6C7 128 aa8.69□□□□□ -1.02
C19orf54-207ENST00000597507 Q6ZRX8 168 aa8.68□□□□□ -1.02
C19orf54-207ENST00000597507 HRCT1Q6UXD1 115 aa8.67□□□□□ -1.02
C19orf54-207ENST00000597507 FABP4P15090 132 aa8.66□□□□□ -1.02
C19orf54-207ENST00000597507 S100A12P80511 92 aa8.66□□□□□ -1.02
C19orf54-207ENST00000597507 ST20-AS1Q8NBB2 130 aa8.66□□□□□ -1.02
C19orf54-207ENST00000597507 MEIG1Q5JSS6 88 aa8.65□□□□□ -1.02
C19orf54-207ENST00000597507 LIMD2Q9BT23 127 aa8.65□□□□□ -1.02
C19orf54-207ENST00000597507 DDTP30046 118 aa8.64□□□□□ -1.03
C19orf54-207ENST00000597507 MAP1LC3CQ9BXW4 147 aa8.64□□□□□ -1.03
C19orf54-207ENST00000597507 TMEM223A0PJW6 202 aa8.63□□□□□ -1.03
C19orf54-207ENST00000597507 PLNP26678 52 aa8.62□□□□□ -1.03
C19orf54-207ENST00000597507 RPL37P61927 97 aaKnown RBP8.62□□□□□ -1.03
C19orf54-207ENST00000597507 COA6Q5JTJ3 125 aaKnown RBP8.6□□□□□ -1.03
C19orf54-207ENST00000597507 TRBV10-2A0A0K0K1G8 114 aa8.59□□□□□ -1.03
C19orf54-207ENST00000597507 DPM2O94777 84 aa8.59□□□□□ -1.03
C19orf54-207ENST00000597507 HERV-K104P63124 156 aa8.58□□□□□ -1.04
C19orf54-207ENST00000597507 KRTAP9-8Q9BYQ0 159 aa8.58□□□□□ -1.04
C19orf54-207ENST00000597507 LOC107984156A0A0G2JMH3 177 aa8.57□□□□□ -1.04
C19orf54-207ENST00000597507 IGKCP01834 107 aa8.57□□□□□ -1.04
C19orf54-207ENST00000597507 HERVK_113P61574 105 aa8.57□□□□□ -1.04
C19orf54-207ENST00000597507 JOSD1Q15040 202 aaPredicted RBP8.57□□□□□ -1.04
C19orf54-207ENST00000597507 ARL17AQ8IVW1 177 aa8.57□□□□□ -1.04
C19orf54-207ENST00000597507 PMCHL2Q9BQD1 86 aa8.57□□□□□ -1.04
C19orf54-207ENST00000597507 SYS1-DBNDD2H3BUS1 97 aa8.56□□□□□ -1.04
C19orf54-207ENST00000597507 LINC00587B1AMM8 73 aa8.55□□□□□ -1.04
C19orf54-207ENST00000597507 S100A6P06703 90 aa8.55□□□□□ -1.04
C19orf54-207ENST00000597507 CFC1P0CG37 223 aa8.55□□□□□ -1.04
C19orf54-207ENST00000597507 SPRR1BP22528 89 aa8.55□□□□□ -1.04
C19orf54-207ENST00000597507 KRTDAPP60985 99 aa8.54□□□□□ -1.04
C19orf54-207ENST00000597507 Q6Q795 121 aa8.54□□□□□ -1.04
C19orf54-207ENST00000597507 PET117Q6UWS5 81 aa8.54□□□□□ -1.04
C19orf54-207ENST00000597507 TRAV23DV6A0A075B6W5 121 aa8.53□□□□□ -1.04
C19orf54-207ENST00000597507 C20orf202A1L168 122 aa8.53□□□□□ -1.04
C19orf54-207ENST00000597507 C5orf52A6NGY3 159 aa8.53□□□□□ -1.04
C19orf54-207ENST00000597507 H7C2G1 150 aa8.53□□□□□ -1.04
C19orf54-207ENST00000597507 S100A2P29034 98 aa8.53□□□□□ -1.04
C19orf54-207ENST00000597507 S100A7L2Q5SY68 101 aa8.53□□□□□ -1.04
C19orf54-207ENST00000597507 SPANXB1Q9NS25 103 aaPredicted RBP8.53□□□□□ -1.04
C19orf54-207ENST00000597507 ZNF73O43830 326 aaPredicted RBP8.52□□□□□ -1.05
C19orf54-207ENST00000597507 C3orf79P0CE67 100 aa8.52□□□□□ -1.05
C19orf54-207ENST00000597507 C1orf195Q5TG92 126 aa8.52□□□□□ -1.05
C19orf54-207ENST00000597507 SYNE2Q8WXH0 6885 aaKnown RBP8.51□□□□□ -1.05
C19orf54-207ENST00000597507 MYMXA0A1B0GTQ4 84 aa8.51□□□□□ -1.05
C19orf54-207ENST00000597507 LEPROTO15243 131 aa8.51□□□□□ -1.05
C19orf54-207ENST00000597507 LINC01545Q5VT33 79 aa8.51□□□□□ -1.05
C19orf54-207ENST00000597507 KRTAP19-1Q8IUB9 90 aa8.51□□□□□ -1.05
C19orf54-207ENST00000597507 LGALS3P17931 250 aaKnown RBP8.5□□□□□ -1.05
C19orf54-207ENST00000597507 CD164Q04900 197 aa8.5□□□□□ -1.05
C19orf54-207ENST00000597507 J3QQQ9 107 aa8.49□□□□□ -1.05
C19orf54-207ENST00000597507 SLC25A34Q6PIV7 304 aa8.49□□□□□ -1.05
C19orf54-207ENST00000597507 HIST3H2BBQ8N257 126 aa8.49□□□□□ -1.05
C19orf54-207ENST00000597507 LAMTOR3Q9UHA4 124 aa8.49□□□□□ -1.05
C19orf54-207ENST00000597507 NMUP48645 174 aa8.48□□□□□ -1.05
C19orf54-207ENST00000597507 AKR1D1P51857 326 aa8.48□□□□□ -1.05
C19orf54-207ENST00000597507 TSPEAR-AS2P59090 65 aa8.48□□□□□ -1.05
C19orf54-207ENST00000597507 Q5XG85 94 aa8.48□□□□□ -1.05
C19orf54-207ENST00000597507 MACF1Q9UPN3 7388 aaKnown RBP8.48□□□□□ -1.05
C19orf54-207ENST00000597507 E9PLD3 99 aa8.47□□□□□ -1.05
C19orf54-207ENST00000597507 NDUFC2O95298 119 aa8.47□□□□□ -1.05
C19orf54-207ENST00000597507 TMA7Q9Y2S6 64 aaKnown RBP8.47□□□□□ -1.05
C19orf54-207ENST00000597507 HIST1H2BLQ99880 126 aa8.46□□□□□ -1.06
C19orf54-207ENST00000597507 EIF4EBP3O60516 100 aaPredicted RBP8.45□□□□□ -1.06
C19orf54-207ENST00000597507 PRO1933Q9H354 126 aa8.45□□□□□ -1.06
C19orf54-207ENST00000597507 LCE2BO14633 110 aa8.44□□□□□ -1.06
C19orf54-207ENST00000597507 SNRPEP62304 92 aaKnown RBP8.44□□□□□ -1.06
C19orf54-207ENST00000597507 Q1RN00 199 aa8.44□□□□□ -1.06
C19orf54-207ENST00000597507 SOSTDC1Q6X4U4 206 aa8.44□□□□□ -1.06
C19orf54-207ENST00000597507 SMIM29Q86T20 159 aa8.44□□□□□ -1.06
C19orf54-207ENST00000597507 MIEN1Q9BRT3 115 aa8.44□□□□□ -1.06
C19orf54-207ENST00000597507 A0A0G2JQZ4 141 aa8.43□□□□□ -1.06
C19orf54-207ENST00000597507 HINT1P49773 126 aaPredicted RBP8.43□□□□□ -1.06
C19orf54-207ENST00000597507 NPC2P61916 151 aa8.41□□□□□ -1.06
C19orf54-207ENST00000597507 ATOH7Q8N100 152 aa8.41□□□□□ -1.06
C19orf54-207ENST00000597507 DHRS4-AS1Q9P1J3 65 aa8.41□□□□□ -1.06
C19orf54-207ENST00000597507 DEFB105AQ8NG35 78 aa8.4□□□□□ -1.06
C19orf54-207ENST00000597507 ZNF815PA8K554 130 aa8.39□□□□□ -1.07
C19orf54-207ENST00000597507 TAL2Q16559 108 aa8.39□□□□□ -1.07
C19orf54-207ENST00000597507 A0A0J9YXY3 114 aa8.38□□□□□ -1.07
C19orf54-207ENST00000597507 MT2AP02795 61 aa8.38□□□□□ -1.07
C19orf54-207ENST00000597507 ADAMTSL4-AS1Q5T5F5 129 aa8.38□□□□□ -1.07
C19orf54-207ENST00000597507 HSBP1L1C9JCN9 74 aa8.37□□□□□ -1.07
C19orf54-207ENST00000597507 SCGB1D1O95968 90 aa8.35□□□□□ -1.07
C19orf54-207ENST00000597507 ANKRD39Q53RE8 183 aa8.35□□□□□ -1.07
C19orf54-207ENST00000597507 ATP11AUNQ6ZP68 121 aa8.35□□□□□ -1.07
C19orf54-207ENST00000597507 TEX49A0A1B0GTD5 131 aa8.34□□□□□ -1.07
C19orf54-207ENST00000597507 TIMM17BO60830 172 aa8.34□□□□□ -1.07
C19orf54-207ENST00000597507 SCGB1D4Q6XE38 83 aa8.34□□□□□ -1.07
C19orf54-207ENST00000597507 TTTY13Q9BZ97 58 aa8.34□□□□□ -1.07
C19orf54-207ENST00000597507 CBY1Q9Y3M2 126 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 186.6 ms