RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 HIGD1BQ9P298 99 aa7.78□□□□□ -1.16
H3F3B-213ENST00000593254 C2orf91Q6ZV80 131 aa7.77□□□□□ -1.17
H3F3B-213ENST00000593254 TMEM126AQ9H061 195 aa7.77□□□□□ -1.17
H3F3B-213ENST00000593254 TMEM238C9JI98 176 aa7.76□□□□□ -1.17
H3F3B-213ENST00000593254 M0R378 163 aa7.75□□□□□ -1.17
H3F3B-213ENST00000593254 LINC00158P58513 81 aa7.75□□□□□ -1.17
H3F3B-213ENST00000593254 PRLHP81277 87 aa7.75□□□□□ -1.17
H3F3B-213ENST00000593254 HSD52Q0P140 79 aa7.75□□□□□ -1.17
H3F3B-213ENST00000593254 PRR4Q16378 134 aa7.75□□□□□ -1.17
H3F3B-213ENST00000593254 BVES-AS1Q5T3Y7 98 aa7.75□□□□□ -1.17
H3F3B-213ENST00000593254 TYMSOSQ8TAI1 123 aa7.75□□□□□ -1.17
H3F3B-213ENST00000593254 ANAPC11Q9NYG5 84 aa7.75□□□□□ -1.17
H3F3B-213ENST00000593254 FAM229BQ4G0N7 80 aa7.74□□□□□ -1.17
H3F3B-213ENST00000593254 KRTAP13-2Q52LG2 175 aa7.74□□□□□ -1.17
H3F3B-213ENST00000593254 FAM19A1Q7Z5A9 133 aa7.74□□□□□ -1.17
H3F3B-213ENST00000593254 MUC17Q685J3 4493 aa7.74□□□□□ -1.17
H3F3B-213ENST00000593254 A0A0U1RRA0 63 aa7.73□□□□□ -1.17
H3F3B-213ENST00000593254 E9PLD3 99 aa7.73□□□□□ -1.17
H3F3B-213ENST00000593254 HINT1P49773 126 aaPredicted RBP7.73□□□□□ -1.17
H3F3B-213ENST00000593254 TAL2Q16559 108 aa7.73□□□□□ -1.17
H3F3B-213ENST00000593254 TSPAN13O95857 204 aa7.72□□□□□ -1.17
H3F3B-213ENST00000593254 SMIM13P0DJ93 91 aa7.72□□□□□ -1.17
H3F3B-213ENST00000593254 NMUP48645 174 aa7.72□□□□□ -1.17
H3F3B-213ENST00000593254 BATFQ16520 125 aa7.72□□□□□ -1.17
H3F3B-213ENST00000593254 HERV-K104P63124 156 aa7.71□□□□□ -1.18
H3F3B-213ENST00000593254 LCE1DQ5T752 114 aa7.71□□□□□ -1.18
H3F3B-213ENST00000593254 IGKV2D-26A0A0A0MRZ7 120 aa7.7□□□□□ -1.18
H3F3B-213ENST00000593254 HERVK_113P61574 105 aa7.7□□□□□ -1.18
H3F3B-213ENST00000593254 MEIG1Q5JSS6 88 aa7.7□□□□□ -1.18
H3F3B-213ENST00000593254 PCP2Q8IVA1 136 aa7.7□□□□□ -1.18
H3F3B-213ENST00000593254 MIR7-3HGQ8N6C7 128 aa7.7□□□□□ -1.18
H3F3B-213ENST00000593254 PLEKHB2Q96CS7 222 aa7.7□□□□□ -1.18
H3F3B-213ENST00000593254 NDUFA12Q9UI09 145 aa7.7□□□□□ -1.18
H3F3B-213ENST00000593254 A6NDN8 102 aa7.69□□□□□ -1.18
H3F3B-213ENST00000593254 KRTAP4-7Q9BYR0 210 aa7.69□□□□□ -1.18
H3F3B-213ENST00000593254 MYMXA0A1B0GTQ4 84 aa7.68□□□□□ -1.18
H3F3B-213ENST00000593254 TSPEAR-AS2P59090 65 aa7.68□□□□□ -1.18
H3F3B-213ENST00000593254 LINC00304Q8N9R0 145 aa7.67□□□□□ -1.18
H3F3B-213ENST00000593254 HIGD2AQ9BW72 106 aa7.67□□□□□ -1.18
H3F3B-213ENST00000593254 FSIP2Q5CZC0 6907 aa7.67□□□□□ -1.18
H3F3B-213ENST00000593254 PRYO14603 147 aa7.66□□□□□ -1.18
H3F3B-213ENST00000593254 TAX1BP3O14907 124 aa7.66□□□□□ -1.18
H3F3B-213ENST00000593254 NCR3O14931 201 aa7.66□□□□□ -1.18
H3F3B-213ENST00000593254 LEPROTO15243 131 aa7.66□□□□□ -1.18
H3F3B-213ENST00000593254 KCNQ1DNQ9H478 68 aa7.66□□□□□ -1.18
H3F3B-213ENST00000593254 SPRR1AP35321 89 aa7.65□□□□□ -1.18
H3F3B-213ENST00000593254 LOC107984156A0A0G2JMH3 177 aa7.64□□□□□ -1.19
H3F3B-213ENST00000593254 ARL17AQ8IVW1 177 aa7.64□□□□□ -1.19
H3F3B-213ENST00000593254 LINC00337Q8N6G1 96 aa7.64□□□□□ -1.19
H3F3B-213ENST00000593254 SPRR4Q96PI1 79 aa7.64□□□□□ -1.19
H3F3B-213ENST00000593254 TRBV10-3A0A0K0K1G6 114 aa7.63□□□□□ -1.19
H3F3B-213ENST00000593254 KRTAP4-16G5E9R7 235 aaPredicted RBP7.63□□□□□ -1.19
H3F3B-213ENST00000593254 J3QQQ9 107 aa7.63□□□□□ -1.19
H3F3B-213ENST00000593254 C3orf22Q8N5N4 141 aa7.63□□□□□ -1.19
H3F3B-213ENST00000593254 DAND5Q8N907 189 aa7.63□□□□□ -1.19
H3F3B-213ENST00000593254 SPANXB1Q9NS25 103 aaPredicted RBP7.63□□□□□ -1.19
H3F3B-213ENST00000593254 CEND1Q8N111 149 aa7.62□□□□□ -1.19
H3F3B-213ENST00000593254 ZNF706Q9Y5V0 76 aaPredicted RBP7.62□□□□□ -1.19
H3F3B-213ENST00000593254 A0A1B0GWB2 263 aa7.61□□□□□ -1.19
H3F3B-213ENST00000593254 C9orf118A6NHY6 69 aa7.61□□□□□ -1.19
H3F3B-213ENST00000593254 UBE2V1Q13404 147 aa7.61□□□□□ -1.19
H3F3B-213ENST00000593254 RETNLBQ9BQ08 111 aa7.61□□□□□ -1.19
H3F3B-213ENST00000593254 TRBV10-2A0A0K0K1G8 114 aa7.6□□□□□ -1.19
H3F3B-213ENST00000593254 ETDCA0A1B0GVM5 59 aa7.6□□□□□ -1.19
H3F3B-213ENST00000593254 ZNF815PA8K554 130 aa7.6□□□□□ -1.19
H3F3B-213ENST00000593254 LGALS3P17931 250 aaKnown RBP7.6□□□□□ -1.19
H3F3B-213ENST00000593254 TTTY13Q9BZ97 58 aa7.6□□□□□ -1.19
H3F3B-213ENST00000593254 TMEM238LA0A1B0GVL6 79 aa7.59□□□□□ -1.19
H3F3B-213ENST00000593254 SMCR5Q8TEV8 140 aa7.59□□□□□ -1.19
H3F3B-213ENST00000593254 FXYD2P54710 66 aa7.58□□□□□ -1.2
H3F3B-213ENST00000593254 HIST1H4GQ99525 98 aa7.58□□□□□ -1.2
H3F3B-213ENST00000593254 CRCT1Q9UGL9 99 aa7.58□□□□□ -1.2
H3F3B-213ENST00000593254 B5MCH6 92 aa7.57□□□□□ -1.2
H3F3B-213ENST00000593254 NDUFC2O95298 119 aa7.57□□□□□ -1.2
H3F3B-213ENST00000593254 VAMP3Q15836 100 aa7.57□□□□□ -1.2
H3F3B-213ENST00000593254 SPAG11AQ6PDA7 123 aa7.57□□□□□ -1.2
H3F3B-213ENST00000593254 SCGB1D4Q6XE38 83 aa7.57□□□□□ -1.2
H3F3B-213ENST00000593254 A0A0J9YXY3 114 aa7.56□□□□□ -1.2
H3F3B-213ENST00000593254 TPRXLQ17RH7 258 aa7.56□□□□□ -1.2
H3F3B-213ENST00000593254 LINC00483Q53H64 154 aa7.56□□□□□ -1.2
H3F3B-213ENST00000593254 GTF2H5Q6ZYL4 71 aa7.56□□□□□ -1.2
H3F3B-213ENST00000593254 IGLV6-57P01721 117 aa7.55□□□□□ -1.2
H3F3B-213ENST00000593254 SOSTDC1Q6X4U4 206 aa7.55□□□□□ -1.2
H3F3B-213ENST00000593254 Q6ZVH6 145 aa7.55□□□□□ -1.2
H3F3B-213ENST00000593254 PPDPFQ9H3Y8 114 aa7.55□□□□□ -1.2
H3F3B-213ENST00000593254 IGLV7-46A0A075B6I9 117 aa7.54□□□□□ -1.2
H3F3B-213ENST00000593254 A0A1W2PPM0 123 aa7.54□□□□□ -1.2
H3F3B-213ENST00000593254 EIF4EBP3O60516 100 aaPredicted RBP7.54□□□□□ -1.2
H3F3B-213ENST00000593254 TIMM17BO60830 172 aa7.54□□□□□ -1.2
H3F3B-213ENST00000593254 ERC2-IT1O76042 136 aa7.54□□□□□ -1.2
H3F3B-213ENST00000593254 ADAMTSL4-AS1Q5T5F5 129 aa7.54□□□□□ -1.2
H3F3B-213ENST00000593254 Q6ZRX8 168 aa7.54□□□□□ -1.2
H3F3B-213ENST00000593254 Q9BRP9 147 aa7.54□□□□□ -1.2
H3F3B-213ENST00000593254 K7EP34 96 aa7.53□□□□□ -1.2
H3F3B-213ENST00000593254 FABP2P12104 132 aa7.53□□□□□ -1.2
H3F3B-213ENST00000593254 S100A7L2Q5SY68 101 aa7.53□□□□□ -1.2
H3F3B-213ENST00000593254 Q8NBF4 154 aa7.53□□□□□ -1.2
H3F3B-213ENST00000593254 NHP2Q9NX24 153 aaKnown RBP7.53□□□□□ -1.2
H3F3B-213ENST00000593254 NPC2P61916 151 aa7.52□□□□□ -1.21
H3F3B-213ENST00000593254 GAGE2AQ6NT46 116 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms