RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 CXCL6P80162 114 aa9.41□□□□□ -0.9
RANBP3-229ENST00000592771 TRBV7-4A0A0J9YYF1 115 aa9.4□□□□□ -0.9
RANBP3-229ENST00000592771 FAM19A1Q7Z5A9 133 aa9.4□□□□□ -0.9
RANBP3-229ENST00000592771 XAGE1AQ9HD64 81 aa9.39□□□□□ -0.91
RANBP3-229ENST00000592771 LINC01547P58512 204 aaPredicted RBP9.39□□□□□ -0.91
RANBP3-229ENST00000592771 HIGD2BQ4VC39 106 aa9.39□□□□□ -0.91
RANBP3-229ENST00000592771 Q6ZVQ6 151 aa9.39□□□□□ -0.91
RANBP3-229ENST00000592771 IGKV2D-24A0A075B6R9 120 aa9.38□□□□□ -0.91
RANBP3-229ENST00000592771 B9D2Q9BPU9 175 aa9.38□□□□□ -0.91
RANBP3-229ENST00000592771 STAB2Q8WWQ8 2551 aa9.36□□□□□ -0.91
RANBP3-229ENST00000592771 DNAH1Q9P2D7 4330 aa9.36□□□□□ -0.91
RANBP3-229ENST00000592771 TRAV7A0A075B6U4 112 aa9.35□□□□□ -0.91
RANBP3-229ENST00000592771 Q6ZRU5 148 aa9.35□□□□□ -0.91
RANBP3-229ENST00000592771 LOC107984640A0A0U1RRK4 108 aa9.35□□□□□ -0.91
RANBP3-229ENST00000592771 LINC00528Q8N1L1 170 aa9.35□□□□□ -0.91
RANBP3-229ENST00000592771 CYSTM1Q9H1C7 97 aa9.35□□□□□ -0.91
RANBP3-229ENST00000592771 HAMPP81172 84 aa9.34□□□□□ -0.91
RANBP3-229ENST00000592771 DPH3Q96FX2 82 aa9.33□□□□□ -0.92
RANBP3-229ENST00000592771 M0R2N4 97 aa9.33□□□□□ -0.92
RANBP3-229ENST00000592771 DYNC2H1Q8NCM8 4307 aaKnown RBP9.33□□□□□ -0.92
RANBP3-229ENST00000592771 COL7A1Q02388 2944 aa9.31□□□□□ -0.92
RANBP3-229ENST00000592771 RMI2Q96E14 147 aa9.31□□□□□ -0.92
RANBP3-229ENST00000592771 SYCNQ0VAF6 134 aa9.3□□□□□ -0.92
RANBP3-229ENST00000592771 KCNQ1DNQ9H478 68 aa9.29□□□□□ -0.92
RANBP3-229ENST00000592771 APLNQ9ULZ1 77 aa9.29□□□□□ -0.92
RANBP3-229ENST00000592771 TLX1NBP0CAT3 122 aa9.28□□□□□ -0.92
RANBP3-229ENST00000592771 PLA2G2DQ9UNK4 145 aa9.28□□□□□ -0.92
RANBP3-229ENST00000592771 MEGF8Q7Z7M0 2845 aa9.28□□□□□ -0.92
RANBP3-229ENST00000592771 CASC10Q5T4H9 136 aa9.27□□□□□ -0.93
RANBP3-229ENST00000592771 Q6ZRP5 223 aa9.27□□□□□ -0.93
RANBP3-229ENST00000592771 A0A1B0GW54 56 aa9.27□□□□□ -0.93
RANBP3-229ENST00000592771 KLKP1Q107X0 134 aa9.27□□□□□ -0.93
RANBP3-229ENST00000592771 FAM19A5Q7Z5A7 132 aaPredicted RBP9.27□□□□□ -0.93
RANBP3-229ENST00000592771 C20orf197Q8N268 126 aa9.27□□□□□ -0.93
RANBP3-229ENST00000592771 PRKDCP78527 4128 aaKnown RBP9.27□□□□□ -0.93
RANBP3-229ENST00000592771 NKAPP1Q8N9T2 125 aa9.25□□□□□ -0.93
RANBP3-229ENST00000592771 KRTAP1-5Q9BYS1 174 aa9.23□□□□□ -0.93
RANBP3-229ENST00000592771 DHRS4-AS1Q9P1J3 65 aa9.23□□□□□ -0.93
RANBP3-229ENST00000592771 IGLV5-37A0A075B6J1 123 aa9.23□□□□□ -0.93
RANBP3-229ENST00000592771 FBN3Q75N90 2809 aa9.23□□□□□ -0.93
RANBP3-229ENST00000592771 NDUFC1O43677 76 aa9.22□□□□□ -0.93
RANBP3-229ENST00000592771 IGLV5-48A0A075B6I7 105 aa9.21□□□□□ -0.93
RANBP3-229ENST00000592771 FAM236DA0A1B0GTK5 79 aa9.21□□□□□ -0.94
RANBP3-229ENST00000592771 PRYO14603 147 aa9.21□□□□□ -0.94
RANBP3-229ENST00000592771 ERC2-IT1O76042 136 aa9.21□□□□□ -0.94
RANBP3-229ENST00000592771 FAM236CP0DP71 79 aa9.21□□□□□ -0.94
RANBP3-229ENST00000592771 C7orf33Q8WU49 177 aa9.21□□□□□ -0.94
RANBP3-229ENST00000592771 H7BZZ5 65 aa9.2□□□□□ -0.94
RANBP3-229ENST00000592771 NUPR2A6NF83 97 aa9.19□□□□□ -0.94
RANBP3-229ENST00000592771 NREPQ16612 68 aa9.19□□□□□ -0.94
RANBP3-229ENST00000592771 UBE2DNLQ8IWF7 75 aa9.19□□□□□ -0.94
RANBP3-229ENST00000592771 SPRR1AP35321 89 aa9.17□□□□□ -0.94
RANBP3-229ENST00000592771 SERTAD4-AS1Q5TG53 156 aa9.17□□□□□ -0.94
RANBP3-229ENST00000592771 Q6ZRX8 168 aa9.17□□□□□ -0.94
RANBP3-229ENST00000592771 Q8N377 158 aa9.17□□□□□ -0.94
RANBP3-229ENST00000592771 SERP1Q9Y6X1 66 aa9.17□□□□□ -0.94
RANBP3-229ENST00000592771 EPM2AB3EWF7 344 aa9.16□□□□□ -0.94
RANBP3-229ENST00000592771 KRTAP4-16G5E9R7 235 aaPredicted RBP9.16□□□□□ -0.94
RANBP3-229ENST00000592771 IGLV1-50A0A075B6I6 118 aa9.15□□□□□ -0.94
RANBP3-229ENST00000592771 BPY2O14599 106 aa9.15□□□□□ -0.94
RANBP3-229ENST00000592771 ATP5EP56381 51 aaPredicted RBP9.15□□□□□ -0.94
RANBP3-229ENST00000592771 C5orf47Q569G3 176 aa9.15□□□□□ -0.94
RANBP3-229ENST00000592771 SCXQ7RTU7 201 aa9.15□□□□□ -0.94
RANBP3-229ENST00000592771 PLECQ15149 4684 aaKnown RBP9.15□□□□□ -0.94
RANBP3-229ENST00000592771 OXTP01178 125 aa9.15□□□□□ -0.95
RANBP3-229ENST00000592771 IGKV4-1P06312 121 aa9.15□□□□□ -0.95
RANBP3-229ENST00000592771 FUSP35637 526 aaKnown RBP eCLIP9.15□□□□□ -0.956e-6■□□□□ 8.1
RANBP3-229ENST00000592771 CSMD3Q7Z407 3707 aa9.15□□□□□ -0.95
RANBP3-229ENST00000592771 DNAH7Q8WXX0 4024 aa9.14□□□□□ -0.95
RANBP3-229ENST00000592771 LYSTQ99698 3801 aa9.13□□□□□ -0.95
RANBP3-229ENST00000592771 ETDCA0A1B0GVM5 59 aa9.13□□□□□ -0.95
RANBP3-229ENST00000592771 CNBPP62633 177 aaKnown RBP9.13□□□□□ -0.95
RANBP3-229ENST00000592771 TNP2Q05952 138 aa9.12□□□□□ -0.95
RANBP3-229ENST00000592771 KRTAP7-1Q8IUC3 87 aa9.11□□□□□ -0.95
RANBP3-229ENST00000592771 DEFB105AQ8NG35 78 aa9.11□□□□□ -0.95
RANBP3-229ENST00000592771 DNAH10Q8IVF4 4471 aa9.11□□□□□ -0.95
RANBP3-229ENST00000592771 VPS13DQ5THJ4 4388 aa9.1□□□□□ -0.95
RANBP3-229ENST00000592771 NBDYA0A0U1RRE5 68 aa9.1□□□□□ -0.95
RANBP3-229ENST00000592771 Q9BRP9 147 aa9.1□□□□□ -0.95
RANBP3-229ENST00000592771 FAM168BA1KXE4 195 aa9.09□□□□□ -0.95
RANBP3-229ENST00000592771 F8WEM9 126 aa9.09□□□□□ -0.95
RANBP3-229ENST00000592771 PSCAO43653 123 aa9.09□□□□□ -0.95
RANBP3-229ENST00000592771 SNURFQ9Y675 71 aa9.09□□□□□ -0.95
RANBP3-229ENST00000592771 TMEM254Q8TBM7 123 aa9.09□□□□□ -0.95
RANBP3-229ENST00000592771 SPRR4Q96PI1 79 aa9.09□□□□□ -0.95
RANBP3-229ENST00000592771 OCR1Q9BZK8 76 aa9.09□□□□□ -0.95
RANBP3-229ENST00000592771 C3orf84H3BNL1 204 aa9.08□□□□□ -0.96
RANBP3-229ENST00000592771 C14orf177Q52M58 125 aa9.08□□□□□ -0.96
RANBP3-229ENST00000592771 C1orf137Q5JT78 98 aa9.08□□□□□ -0.96
RANBP3-229ENST00000592771 Q5XG85 94 aa9.08□□□□□ -0.96
RANBP3-229ENST00000592771 MRPL55Q7Z7F7 128 aaKnown RBP9.08□□□□□ -0.96
RANBP3-229ENST00000592771 Q8NBF4 154 aa9.08□□□□□ -0.96
RANBP3-229ENST00000592771 A0A1W2PNM2 257 aa9.07□□□□□ -0.96
RANBP3-229ENST00000592771 RPL37AP8A6NKH3 93 aa9.07□□□□□ -0.96
RANBP3-229ENST00000592771 STARD9Q9P2P6 4700 aa9.06□□□□□ -0.96
RANBP3-229ENST00000592771 TGP01266 2768 aa9.06□□□□□ -0.96
RANBP3-229ENST00000592771 Q6ZRN7 208 aaPredicted RBP9.06□□□□□ -0.96
RANBP3-229ENST00000592771 TENM2Q9NT68 2774 aa9.06□□□□□ -0.96
RANBP3-229ENST00000592771 LRCOL1A6NCL2 159 aa9.05□□□□□ -0.96
RANBP3-229ENST00000592771 C16orf90A8MZG2 172 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms