RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 XAGE1AQ9HD64 81 aa6.79□□□□□ -1.32
SMAD4-214ENST00000592186 PLA2G2DQ9UNK4 145 aa6.79□□□□□ -1.32
SMAD4-214ENST00000592186 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.79□□□□□ -1.32
SMAD4-214ENST00000592186 C9JAW5 83 aa6.78□□□□□ -1.32
SMAD4-214ENST00000592186 CHTF8P0CG12 524 aa6.78□□□□□ -1.32
SMAD4-214ENST00000592186 ADAMTSL4-AS1Q5T5F5 129 aa6.78□□□□□ -1.32
SMAD4-214ENST00000592186 LITAFQ99732 161 aa6.78□□□□□ -1.32
SMAD4-214ENST00000592186 CFC1BP0CG36 223 aa6.77□□□□□ -1.32
SMAD4-214ENST00000592186 CFC1P0CG37 223 aa6.77□□□□□ -1.32
SMAD4-214ENST00000592186 C9orf129Q5T035 196 aaKnown RBP6.77□□□□□ -1.32
SMAD4-214ENST00000592186 PLAC8Q9NZF1 115 aa6.77□□□□□ -1.32
SMAD4-214ENST00000592186 FAM30AQ9NZY2 134 aa6.77□□□□□ -1.32
SMAD4-214ENST00000592186 DNAH11Q96DT5 4516 aa6.77□□□□□ -1.33
SMAD4-214ENST00000592186 A0A087WYN8 130 aa6.76□□□□□ -1.33
SMAD4-214ENST00000592186 EPM2AB3EWF7 344 aa6.76□□□□□ -1.33
SMAD4-214ENST00000592186 PANO1I0J062 215 aa6.76□□□□□ -1.33
SMAD4-214ENST00000592186 CDK2AP2O75956 126 aa6.76□□□□□ -1.33
SMAD4-214ENST00000592186 C9orf153Q5TBE3 101 aa6.76□□□□□ -1.33
SMAD4-214ENST00000592186 HECTD4Q9Y4D8 3996 aa6.76□□□□□ -1.33
SMAD4-214ENST00000592186 FAM229AH3BQW9 127 aa6.76□□□□□ -1.33
SMAD4-214ENST00000592186 CRYGAP11844 174 aa6.76□□□□□ -1.33
SMAD4-214ENST00000592186 DAND5Q8N907 189 aa6.76□□□□□ -1.33
SMAD4-214ENST00000592186 CIRBP-AS1Q8TBR5 109 aa6.76□□□□□ -1.33
SMAD4-214ENST00000592186 LINC00308Q8TCZ7 52 aa6.76□□□□□ -1.33
SMAD4-214ENST00000592186 A0A1W2PNN7 141 aa6.75□□□□□ -1.33
SMAD4-214ENST00000592186 NDUFC2O95298 119 aa6.75□□□□□ -1.33
SMAD4-214ENST00000592186 TMEM258P61165 79 aa6.75□□□□□ -1.33
SMAD4-214ENST00000592186 NKAPP1Q8N9T2 125 aa6.75□□□□□ -1.33
SMAD4-214ENST00000592186 IGLV5-37A0A075B6J1 123 aa6.74□□□□□ -1.33
SMAD4-214ENST00000592186 SCXQ7RTU7 201 aa6.74□□□□□ -1.33
SMAD4-214ENST00000592186 FAM168BA1KXE4 195 aa6.73□□□□□ -1.33
SMAD4-214ENST00000592186 ATOX1O00244 68 aa6.73□□□□□ -1.33
SMAD4-214ENST00000592186 COX6CP09669 75 aa6.73□□□□□ -1.33
SMAD4-214ENST00000592186 FAM19A5Q7Z5A7 132 aaPredicted RBP6.73□□□□□ -1.33
SMAD4-214ENST00000592186 LINC00643Q86TS7 51 aa6.73□□□□□ -1.33
SMAD4-214ENST00000592186 MUSTN1Q8IVN3 82 aa6.73□□□□□ -1.33
SMAD4-214ENST00000592186 C22orf24Q9Y442 160 aa6.73□□□□□ -1.33
SMAD4-214ENST00000592186 PKHD1P08F94 4074 aa6.72□□□□□ -1.33
SMAD4-214ENST00000592186 FAM236AA0A1B0GUQ0 79 aa6.72□□□□□ -1.33
SMAD4-214ENST00000592186 FAM236BA0A1B0GV22 79 aa6.72□□□□□ -1.33
SMAD4-214ENST00000592186 M0R378 163 aa6.72□□□□□ -1.33
SMAD4-214ENST00000592186 VPREB1P12018 145 aa6.72□□□□□ -1.33
SMAD4-214ENST00000592186 COX7CP15954 63 aa6.72□□□□□ -1.33
SMAD4-214ENST00000592186 SERTAD4-AS1Q5TG53 156 aa6.72□□□□□ -1.33
SMAD4-214ENST00000592186 C7orf33Q8WU49 177 aa6.72□□□□□ -1.33
SMAD4-214ENST00000592186 LOC100996750A0A140TA64 210 aa6.71□□□□□ -1.34
SMAD4-214ENST00000592186 NPC2P61916 151 aa6.71□□□□□ -1.34
SMAD4-214ENST00000592186 SOSTDC1Q6X4U4 206 aa6.71□□□□□ -1.34
SMAD4-214ENST00000592186 MRPL55Q7Z7F7 128 aaKnown RBP6.71□□□□□ -1.34
SMAD4-214ENST00000592186 KRTAP7-1Q8IUC3 87 aa6.71□□□□□ -1.34
SMAD4-214ENST00000592186 KRTAP4-6Q9BYQ5 205 aa6.71□□□□□ -1.34
SMAD4-214ENST00000592186 TEX49A0A1B0GTD5 131 aa6.7□□□□□ -1.34
SMAD4-214ENST00000592186 A4D1N5 150 aa6.7□□□□□ -1.34
SMAD4-214ENST00000592186 LST1O00453 97 aa6.7□□□□□ -1.34
SMAD4-214ENST00000592186 HIST1H4AP62805 103 aaKnown RBP6.7□□□□□ -1.34
SMAD4-214ENST00000592186 EIF4EBP3O60516 100 aaPredicted RBP6.69□□□□□ -1.34
SMAD4-214ENST00000592186 Q1RN00 199 aa6.69□□□□□ -1.34
SMAD4-214ENST00000592186 LINC00167Q96N53 147 aa6.69□□□□□ -1.34
SMAD4-214ENST00000592186 PRR3P79522 188 aaKnown RBP6.68□□□□□ -1.34
SMAD4-214ENST00000592186 GAGE2AQ6NT46 116 aa6.68□□□□□ -1.34
SMAD4-214ENST00000592186 PHF5AQ7RTV0 110 aaKnown RBP6.68□□□□□ -1.34
SMAD4-214ENST00000592186 EPPK1P58107 5090 aaKnown RBP6.67□□□□□ -1.34
SMAD4-214ENST00000592186 DNAH5Q8TE73 4624 aa6.67□□□□□ -1.34
SMAD4-214ENST00000592186 NCR3O14931 201 aa6.67□□□□□ -1.34
SMAD4-214ENST00000592186 TRIAP1O43715 76 aa6.67□□□□□ -1.34
SMAD4-214ENST00000592186 UBE2BP63146 152 aa6.67□□□□□ -1.34
SMAD4-214ENST00000592186 S100A7L2Q5SY68 101 aa6.67□□□□□ -1.34
SMAD4-214ENST00000592186 Q8NDZ9 215 aa6.67□□□□□ -1.34
SMAD4-214ENST00000592186 IGLV1-50A0A075B6I6 118 aa6.66□□□□□ -1.34
SMAD4-214ENST00000592186 TRAV13-2A0A0B4J235 113 aa6.66□□□□□ -1.34
SMAD4-214ENST00000592186 INAFM2P0DMQ5 153 aa6.66□□□□□ -1.34
SMAD4-214ENST00000592186 HAMPP81172 84 aa6.66□□□□□ -1.34
SMAD4-214ENST00000592186 DYNC1H1Q14204 4646 aaKnown RBP6.66□□□□□ -1.34
SMAD4-214ENST00000592186 IGKV2-28A0A075B6P5 120 aa6.65□□□□□ -1.35
SMAD4-214ENST00000592186 RPL37AP8A6NKH3 93 aa6.65□□□□□ -1.35
SMAD4-214ENST00000592186 IGKV2D-28P01615 120 aa6.65□□□□□ -1.35
SMAD4-214ENST00000592186 TRACP01848 142 aa6.65□□□□□ -1.35
SMAD4-214ENST00000592186 IGLV6-57P01721 117 aa6.64□□□□□ -1.35
SMAD4-214ENST00000592186 KCNQ1DNQ9H478 68 aa6.64□□□□□ -1.35
SMAD4-214ENST00000592186 LRP1BQ9NZR2 4599 aa6.63□□□□□ -1.35
SMAD4-214ENST00000592186 TRBV10-3A0A0K0K1G6 114 aa6.63□□□□□ -1.35
SMAD4-214ENST00000592186 SMR3BP02814 79 aaPredicted RBP6.63□□□□□ -1.35
SMAD4-214ENST00000592186 PLA2G1BP04054 148 aaKnown RBP6.63□□□□□ -1.35
SMAD4-214ENST00000592186 PRYO14603 147 aa6.62□□□□□ -1.35
SMAD4-214ENST00000592186 LINC00337Q8N6G1 96 aa6.62□□□□□ -1.35
SMAD4-214ENST00000592186 PSORS1C2Q9UIG4 136 aa6.62□□□□□ -1.35
SMAD4-214ENST00000592186 RPL37AP61513 92 aaKnown RBP6.61□□□□□ -1.35
SMAD4-214ENST00000592186 REG3GQ6UW15 175 aa6.61□□□□□ -1.35
SMAD4-214ENST00000592186 Q8N1X5 172 aa6.61□□□□□ -1.35
SMAD4-214ENST00000592186 TRAV23DV6A0A075B6W5 121 aa6.6□□□□□ -1.35
SMAD4-214ENST00000592186 BCE1O60756 84 aa6.6□□□□□ -1.35
SMAD4-214ENST00000592186 C1orf137Q5JT78 98 aa6.6□□□□□ -1.35
SMAD4-214ENST00000592186 SERP2Q8N6R1 65 aa6.6□□□□□ -1.35
SMAD4-214ENST00000592186 Q6JHZ5 121 aa6.59□□□□□ -1.35
SMAD4-214ENST00000592186 KRTAP11-1Q8IUC1 163 aa6.59□□□□□ -1.35
SMAD4-214ENST00000592186 DNAH8Q96JB1 4490 aa6.59□□□□□ -1.35
SMAD4-214ENST00000592186 ZNF73O43830 326 aaPredicted RBP6.58□□□□□ -1.36
SMAD4-214ENST00000592186 SPRR1AP35321 89 aa6.58□□□□□ -1.36
SMAD4-214ENST00000592186 TRBV7-6A0A0J9YX20 115 aa6.57□□□□□ -1.36
SMAD4-214ENST00000592186 ETDCA0A1B0GVM5 59 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms