RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 PMCHL2Q9BQD1 86 aa11.21□□□□□ -0.61
TNFRSF11A-204ENST00000592013 ZNF73O43830 326 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF11A-204ENST00000592013 SLC25A34Q6PIV7 304 aa11.2□□□□□ -0.62
TNFRSF11A-204ENST00000592013 A0A0J9YXY3 114 aa11.19□□□□□ -0.62
TNFRSF11A-204ENST00000592013 SMCPP49901 116 aaPredicted RBP11.18□□□□□ -0.62
TNFRSF11A-204ENST00000592013 Q9BRP9 147 aa11.18□□□□□ -0.62
TNFRSF11A-204ENST00000592013 COLCA2A8K830 154 aa11.17□□□□□ -0.62
TNFRSF11A-204ENST00000592013 ERC2-IT1O76042 136 aa11.17□□□□□ -0.62
TNFRSF11A-204ENST00000592013 KRTAP13-3Q3SY46 172 aa11.17□□□□□ -0.62
TNFRSF11A-204ENST00000592013 SEC61BP60468 96 aaKnown RBP11.16□□□□□ -0.62
TNFRSF11A-204ENST00000592013 C9orf153Q5TBE3 101 aa11.16□□□□□ -0.62
TNFRSF11A-204ENST00000592013 SPANXCQ9NY87 97 aa11.16□□□□□ -0.62
TNFRSF11A-204ENST00000592013 TIMM17BO60830 172 aa11.15□□□□□ -0.62
TNFRSF11A-204ENST00000592013 SYS1-DBNDD2H3BUS1 97 aa11.14□□□□□ -0.63
TNFRSF11A-204ENST00000592013 DHRS4-AS1Q9P1J3 65 aa11.14□□□□□ -0.63
TNFRSF11A-204ENST00000592013 NPC2P61916 151 aa11.13□□□□□ -0.63
TNFRSF11A-204ENST00000592013 OR13C6PQ8NH95 151 aa11.13□□□□□ -0.63
TNFRSF11A-204ENST00000592013 COPS9Q8WXC6 57 aa11.13□□□□□ -0.63
TNFRSF11A-204ENST00000592013 ASB16-AS1Q495Z4 193 aa11.12□□□□□ -0.63
TNFRSF11A-204ENST00000592013 LINC00518Q8N0U6 118 aa11.12□□□□□ -0.63
TNFRSF11A-204ENST00000592013 Q8N377 158 aa11.12□□□□□ -0.63
TNFRSF11A-204ENST00000592013 SPANXDQ9BXN6 97 aa11.12□□□□□ -0.63
TNFRSF11A-204ENST00000592013 ADAMTSL4-AS1Q5T5F5 129 aa11.11□□□□□ -0.63
TNFRSF11A-204ENST00000592013 PET117Q6UWS5 81 aa11.11□□□□□ -0.63
TNFRSF11A-204ENST00000592013 SOSTDC1Q6X4U4 206 aa11.1□□□□□ -0.63
TNFRSF11A-204ENST00000592013 LINC00308Q8TCZ7 52 aa11.1□□□□□ -0.63
TNFRSF11A-204ENST00000592013 LIMD2Q9BT23 127 aa11.1□□□□□ -0.63
TNFRSF11A-204ENST00000592013 ZNF815PA8K554 130 aa11.08□□□□□ -0.64
TNFRSF11A-204ENST00000592013 SLC7A5P1Q8MH63 180 aa11.08□□□□□ -0.64
TNFRSF11A-204ENST00000592013 LINC01545Q5VT33 79 aa11.07□□□□□ -0.64
TNFRSF11A-204ENST00000592013 LAMTOR3Q9UHA4 124 aa11.07□□□□□ -0.64
TNFRSF11A-204ENST00000592013 FAT4Q6V0I7 4981 aa11.06□□□□□ -0.64
TNFRSF11A-204ENST00000592013 AKR1D1P51857 326 aa11.06□□□□□ -0.64
TNFRSF11A-204ENST00000592013 HIST1H2BKO60814 126 aa11.05□□□□□ -0.64
TNFRSF11A-204ENST00000592013 HIST1H2BJP06899 126 aa11.05□□□□□ -0.64
TNFRSF11A-204ENST00000592013 HIST1H2BOP23527 126 aa11.05□□□□□ -0.64
TNFRSF11A-204ENST00000592013 HIST1H2BBP33778 126 aa11.05□□□□□ -0.64
TNFRSF11A-204ENST00000592013 HIST1H2BDP58876 126 aa11.05□□□□□ -0.64
TNFRSF11A-204ENST00000592013 HIST1H2BCP62807 126 aa11.05□□□□□ -0.64
TNFRSF11A-204ENST00000592013 HIST2H2BEQ16778 126 aa11.05□□□□□ -0.64
TNFRSF11A-204ENST00000592013 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.05□□□□□ -0.64
TNFRSF11A-204ENST00000592013 HIST1H2BHQ93079 126 aa11.05□□□□□ -0.64
TNFRSF11A-204ENST00000592013 HIST1H2BNQ99877 126 aa11.05□□□□□ -0.64
TNFRSF11A-204ENST00000592013 HIST1H2BMQ99879 126 aa11.05□□□□□ -0.64
TNFRSF11A-204ENST00000592013 SPRR1BP22528 89 aa11.04□□□□□ -0.64
TNFRSF11A-204ENST00000592013 LITAFQ99732 161 aa11.04□□□□□ -0.64
TNFRSF11A-204ENST00000592013 MUC17Q685J3 4493 aa11.03□□□□□ -0.64
TNFRSF11A-204ENST00000592013 C20orf202A1L168 122 aa11.03□□□□□ -0.64
TNFRSF11A-204ENST00000592013 LINC01547P58512 204 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF11A-204ENST00000592013 EIF4EBP3O60516 100 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF11A-204ENST00000592013 COX7BP24311 80 aa11.02□□□□□ -0.65
TNFRSF11A-204ENST00000592013 SCGB1D4Q6XE38 83 aa11.02□□□□□ -0.65
TNFRSF11A-204ENST00000592013 ST20-AS1Q8NBB2 130 aa11.02□□□□□ -0.65
TNFRSF11A-204ENST00000592013 TRBV7-6A0A0J9YX20 115 aa11□□□□□ -0.65
TNFRSF11A-204ENST00000592013 ELOF1P60002 83 aaKnown RBP11□□□□□ -0.65
TNFRSF11A-204ENST00000592013 Q6ZVH6 145 aa11□□□□□ -0.65
TNFRSF11A-204ENST00000592013 KRTAP9-2Q9BYQ4 174 aa11□□□□□ -0.65
TNFRSF11A-204ENST00000592013 TAL2Q16559 108 aa10.99□□□□□ -0.65
TNFRSF11A-204ENST00000592013 IFITM1P13164 125 aa10.98□□□□□ -0.65
TNFRSF11A-204ENST00000592013 C6orf99Q4VX62 202 aa10.98□□□□□ -0.65
TNFRSF11A-204ENST00000592013 XP32Q5T750 250 aa10.98□□□□□ -0.65
TNFRSF11A-204ENST00000592013 KRTDAPP60985 99 aa10.97□□□□□ -0.65
TNFRSF11A-204ENST00000592013 CD164Q04900 197 aa10.97□□□□□ -0.65
TNFRSF11A-204ENST00000592013 TEX49A0A1B0GTD5 131 aa10.96□□□□□ -0.65
TNFRSF11A-204ENST00000592013 C3orf79P0CE67 100 aa10.96□□□□□ -0.65
TNFRSF11A-204ENST00000592013 PRO1933Q9H354 126 aa10.96□□□□□ -0.65
TNFRSF11A-204ENST00000592013 A0A1B0GWB2 263 aa10.95□□□□□ -0.66
TNFRSF11A-204ENST00000592013 A4D1N5 150 aa10.95□□□□□ -0.66
TNFRSF11A-204ENST00000592013 LORP23490 312 aaPredicted RBP10.95□□□□□ -0.66
TNFRSF11A-204ENST00000592013 COA6Q5JTJ3 125 aaKnown RBP10.94□□□□□ -0.66
TNFRSF11A-204ENST00000592013 NHP2Q9NX24 153 aaKnown RBP10.94□□□□□ -0.66
TNFRSF11A-204ENST00000592013 A6NDN8 102 aa10.92□□□□□ -0.66
TNFRSF11A-204ENST00000592013 H7C2G1 150 aa10.91□□□□□ -0.66
TNFRSF11A-204ENST00000592013 SNRPEP62304 92 aaKnown RBP10.91□□□□□ -0.66
TNFRSF11A-204ENST00000592013 DEFB105AQ8NG35 78 aa10.91□□□□□ -0.66
TNFRSF11A-204ENST00000592013 LOC100996750A0A140TA64 210 aa10.9□□□□□ -0.66
TNFRSF11A-204ENST00000592013 HRCT1Q6UXD1 115 aa10.9□□□□□ -0.66
TNFRSF11A-204ENST00000592013 KRTAP4-6Q9BYQ5 205 aa10.9□□□□□ -0.66
TNFRSF11A-204ENST00000592013 TTTY13Q9BZ97 58 aa10.89□□□□□ -0.67
TNFRSF11A-204ENST00000592013 TRAV13-2A0A0B4J235 113 aa10.88□□□□□ -0.67
TNFRSF11A-204ENST00000592013 Q1RN00 199 aa10.88□□□□□ -0.67
TNFRSF11A-204ENST00000592013 Q5XG85 94 aa10.86□□□□□ -0.67
TNFRSF11A-204ENST00000592013 VAMP3Q15836 100 aa10.85□□□□□ -0.67
TNFRSF11A-204ENST00000592013 IGLV5-48A0A075B6I7 105 aa10.84□□□□□ -0.67
TNFRSF11A-204ENST00000592013 ANKRD39Q53RE8 183 aa10.82□□□□□ -0.68
TNFRSF11A-204ENST00000592013 MUSTN1Q8IVN3 82 aa10.82□□□□□ -0.68
TNFRSF11A-204ENST00000592013 F8WEM9 126 aa10.81□□□□□ -0.68
TNFRSF11A-204ENST00000592013 TCL1BO95988 128 aa10.8□□□□□ -0.68
TNFRSF11A-204ENST00000592013 HSBP1L1C9JCN9 74 aa10.79□□□□□ -0.68
TNFRSF11A-204ENST00000592013 C9orf92A6NGG3 77 aa10.78□□□□□ -0.68
TNFRSF11A-204ENST00000592013 ATOH7Q8N100 152 aa10.78□□□□□ -0.68
TNFRSF11A-204ENST00000592013 KRTAP4-1Q9BYQ7 146 aa10.78□□□□□ -0.68
TNFRSF11A-204ENST00000592013 SMIM29Q86T20 159 aa10.77□□□□□ -0.69
TNFRSF11A-204ENST00000592013 PCP2Q8IVA1 136 aa10.76□□□□□ -0.69
TNFRSF11A-204ENST00000592013 IGLV8-61A0A075B6I0 122 aa10.75□□□□□ -0.69
TNFRSF11A-204ENST00000592013 PCOTHQ58A44 107 aa10.75□□□□□ -0.69
TNFRSF11A-204ENST00000592013 SMIM11BQ8TCY0 68 aa10.75□□□□□ -0.69
TNFRSF11A-204ENST00000592013 S100A2P29034 98 aa10.74□□□□□ -0.69
TNFRSF11A-204ENST00000592013 C1orf195Q5TG92 126 aa10.72□□□□□ -0.69
TNFRSF11A-204ENST00000592013 KRTAP9-6A0A140TA67 174 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms