RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 NTM-AS1Q6ZSK4 140 aa2.06□□□□□ -2.08
VMP1-212ENST00000591782 COA5Q86WW8 74 aa2.06□□□□□ -2.08
VMP1-212ENST00000591782 KCNQ1DNQ9H478 68 aa2.06□□□□□ -2.08
VMP1-212ENST00000591782 ITPR1Q14643 2758 aa2.06□□□□□ -2.08
VMP1-212ENST00000591782 DSPP15924 2871 aaKnown RBP2.05□□□□□ -2.08
VMP1-212ENST00000591782 TNCP24821 2201 aa2.05□□□□□ -2.08
VMP1-212ENST00000591782 WDFY3Q8IZQ1 3526 aa2.05□□□□□ -2.08
VMP1-212ENST00000591782 IGKV1D-37A0A075B6S9 117 aa2.05□□□□□ -2.08
VMP1-212ENST00000591782 IGKV3D-11A0A0A0MRZ8 115 aa2.05□□□□□ -2.08
VMP1-212ENST00000591782 C10orf142B7Z368 130 aa2.05□□□□□ -2.08
VMP1-212ENST00000591782 TLX1NBP0CAT3 122 aa2.05□□□□□ -2.08
VMP1-212ENST00000591782 CCL3L1P16619 93 aa2.05□□□□□ -2.08
VMP1-212ENST00000591782 COX7BP24311 80 aa2.05□□□□□ -2.08
VMP1-212ENST00000591782 KRTAP25-1Q3LHN0 102 aa2.05□□□□□ -2.08
VMP1-212ENST00000591782 SPINK9Q5DT21 86 aa2.05□□□□□ -2.08
VMP1-212ENST00000591782 KRTAP5-5Q701N2 237 aaPredicted RBP2.05□□□□□ -2.08
VMP1-212ENST00000591782 CIRBP-AS1Q8TBR5 109 aa2.05□□□□□ -2.08
VMP1-212ENST00000591782 TTTY12Q9BZ98 90 aa2.05□□□□□ -2.08
VMP1-212ENST00000591782 DMXL2Q8TDJ6 3036 aa2.05□□□□□ -2.08
VMP1-212ENST00000591782 DIDO1Q9BTC0 2240 aaKnown RBP2.05□□□□□ -2.08
VMP1-212ENST00000591782 SPTAN1Q13813 2472 aaKnown RBP2.05□□□□□ -2.08
VMP1-212ENST00000591782 CHD7Q9P2D1 2997 aa2.04□□□□□ -2.08
VMP1-212ENST00000591782 IGKV1OR2-108A0A075B7D4 117 aa2.04□□□□□ -2.08
VMP1-212ENST00000591782 IGKV2-29A2NJV5 120 aaPredicted RBP2.04□□□□□ -2.08
VMP1-212ENST00000591782 CACNA1HO95180 2353 aa2.04□□□□□ -2.08
VMP1-212ENST00000591782 IGKV4-1P06312 121 aa2.04□□□□□ -2.08
VMP1-212ENST00000591782 NOTCH2Q04721 2471 aa2.04□□□□□ -2.08
VMP1-212ENST00000591782 CHD9Q3L8U1 2897 aa2.04□□□□□ -2.08
VMP1-212ENST00000591782 MALRD1Q5VYJ5 2156 aa2.04□□□□□ -2.08
VMP1-212ENST00000591782 PLAC8Q9NZF1 115 aa2.04□□□□□ -2.08
VMP1-212ENST00000591782 CREBBPQ92793 2442 aa2.03□□□□□ -2.08
VMP1-212ENST00000591782 PRR14LQ5THK1 2151 aa2.03□□□□□ -2.08
VMP1-212ENST00000591782 CLPSL1A2RUU4 121 aa2.03□□□□□ -2.08
VMP1-212ENST00000591782 PRB1P04280 392 aa2.03□□□□□ -2.08
VMP1-212ENST00000591782 RNASE3P12724 160 aaKnown RBP2.03□□□□□ -2.08
VMP1-212ENST00000591782 SPINT4Q6UDR6 99 aa2.03□□□□□ -2.08
VMP1-212ENST00000591782 MINOS1-NBL1R4GNA1 71 aa2.03□□□□□ -2.08
VMP1-212ENST00000591782 LAMA5O15230 3695 aa2.03□□□□□ -2.08
VMP1-212ENST00000591782 SPTA1P02549 2419 aa2.03□□□□□ -2.08
VMP1-212ENST00000591782 CEP250Q9BV73 2442 aa2.02□□□□□ -2.09
VMP1-212ENST00000591782 ALPK2Q86TB3 2170 aa2.02□□□□□ -2.09
VMP1-212ENST00000591782 POLQO75417 2590 aa2.02□□□□□ -2.09
VMP1-212ENST00000591782 IGKV2-28A0A075B6P5 120 aa2.02□□□□□ -2.09
VMP1-212ENST00000591782 A0A1B0GU69 56 aa2.02□□□□□ -2.09
VMP1-212ENST00000591782 TRBV6-4A0A1B0GX49 114 aa2.02□□□□□ -2.09
VMP1-212ENST00000591782 IGKV2D-28P01615 120 aa2.02□□□□□ -2.09
VMP1-212ENST00000591782 SPATA8Q6RVD6 105 aa2.02□□□□□ -2.09
VMP1-212ENST00000591782 TMEM105Q8N8V8 129 aa2.02□□□□□ -2.09
VMP1-212ENST00000591782 SMIM11BQ8TCY0 68 aa2.02□□□□□ -2.09
VMP1-212ENST00000591782 KRTAP4-3Q9BYR4 195 aa2.02□□□□□ -2.09
VMP1-212ENST00000591782 SPTBN2O15020 2390 aa2.02□□□□□ -2.09
VMP1-212ENST00000591782 NAV3Q8IVL0 2385 aa2.02□□□□□ -2.09
VMP1-212ENST00000591782 SPAG17Q6Q759 2223 aa2.02□□□□□ -2.09
VMP1-212ENST00000591782 PRRC2BQ5JSZ5 2229 aaKnown RBP2.01□□□□□ -2.09
VMP1-212ENST00000591782 TECTAO75443 2155 aa2.01□□□□□ -2.09
VMP1-212ENST00000591782 IGKV3-7A0A075B6H7 116 aa2.01□□□□□ -2.09
VMP1-212ENST00000591782 A8MUU9 505 aa2.01□□□□□ -2.09
VMP1-212ENST00000591782 H3BRN7 92 aa2.01□□□□□ -2.09
VMP1-212ENST00000591782 SPINK7P58062 85 aa2.01□□□□□ -2.09
VMP1-212ENST00000591782 C15orf56Q8N910 161 aa2.01□□□□□ -2.09
VMP1-212ENST00000591782 PCNX1Q96RV3 2341 aa2.01□□□□□ -2.09
VMP1-212ENST00000591782 COL27A1Q8IZC6 1860 aaPredicted RBP2.01□□□□□ -2.09
VMP1-212ENST00000591782 EP300Q09472 2414 aaPredicted RBP2□□□□□ -2.09
VMP1-212ENST00000591782 SETD2Q9BYW2 2564 aaPredicted RBP2□□□□□ -2.09
VMP1-212ENST00000591782 IGLV4-60A0A075B6I1 120 aa2□□□□□ -2.09
VMP1-212ENST00000591782 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2□□□□□ -2.09
VMP1-212ENST00000591782 DEFB131BA0A096LNP1 70 aa2□□□□□ -2.09
VMP1-212ENST00000591782 TRGV1A0A0A0MS02 117 aa2□□□□□ -2.09
VMP1-212ENST00000591782 CRIP1P50238 77 aa2□□□□□ -2.09
VMP1-212ENST00000591782 POLR2KP53803 58 aaKnown RBP2□□□□□ -2.09
VMP1-212ENST00000591782 LINC00158P58513 81 aa2□□□□□ -2.09
VMP1-212ENST00000591782 DEFB116Q30KQ4 102 aa2□□□□□ -2.09
VMP1-212ENST00000591782 Q6ZQY7 126 aa2□□□□□ -2.09
VMP1-212ENST00000591782 SPRR4Q96PI1 79 aa2□□□□□ -2.09
VMP1-212ENST00000591782 NBPF19A0A087WUL8 3843 aa2□□□□□ -2.09
VMP1-212ENST00000591782 RP1L1Q8IWN7 2480 aaPredicted RBP1.99□□□□□ -2.09
VMP1-212ENST00000591782 IGSF10Q6WRI0 2623 aa1.99□□□□□ -2.09
VMP1-212ENST00000591782 NF1P21359 2839 aa1.99□□□□□ -2.09
VMP1-212ENST00000591782 Q5W150 140 aa1.99□□□□□ -2.09
VMP1-212ENST00000591782 KRTAP26-1Q6PEX3 210 aa1.99□□□□□ -2.09
VMP1-212ENST00000591782 KNTC1P50748 2209 aa1.98□□□□□ -2.09
VMP1-212ENST00000591782 BOD1L1Q8NFC6 3051 aa1.98□□□□□ -2.09
VMP1-212ENST00000591782 IGKV2-40A0A087WW87 121 aaPredicted RBP1.98□□□□□ -2.09
VMP1-212ENST00000591782 IGKV2D-40P01614 121 aaPredicted RBP1.98□□□□□ -2.09
VMP1-212ENST00000591782 RPL39P62891 51 aaKnown RBP1.98□□□□□ -2.09
VMP1-212ENST00000591782 Q6ZTI0 123 aa1.98□□□□□ -2.09
VMP1-212ENST00000591782 TMEM167AQ8TBQ9 72 aa1.98□□□□□ -2.09
VMP1-212ENST00000591782 RPL39LQ96EH5 51 aaKnown RBP1.98□□□□□ -2.09
VMP1-212ENST00000591782 RNF5Q99942 180 aa1.98□□□□□ -2.09
VMP1-212ENST00000591782 FBN1P35555 2871 aaKnown RBP1.98□□□□□ -2.09
VMP1-212ENST00000591782 SPG11Q96JI7 2443 aa1.97□□□□□ -2.09
VMP1-212ENST00000591782 USF3Q68DE3 2245 aa1.97□□□□□ -2.09
VMP1-212ENST00000591782 IGKV3OR2-268A0A0C4DH90 116 aa1.97□□□□□ -2.09
VMP1-212ENST00000591782 A0A1B0GU33 70 aa1.97□□□□□ -2.09
VMP1-212ENST00000591782 P0C880 135 aa1.97□□□□□ -2.09
VMP1-212ENST00000591782 RPL37AP61513 92 aaKnown RBP1.97□□□□□ -2.09
VMP1-212ENST00000591782 PP632Q6XCG6 107 aa1.97□□□□□ -2.09
VMP1-212ENST00000591782 PATE1Q8WXA2 126 aa1.97□□□□□ -2.09
VMP1-212ENST00000591782 TP53AIP1Q9HCN2 124 aa1.97□□□□□ -2.09
VMP1-212ENST00000591782 SEC16AO15027 2179 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms