RNA–Protein interactions for RNA: ENST00000591475.5

VPS4B-206, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 1 (best)

Gene VPS4B, Length 2,008 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-206ENST00000591475 H7BZZ5 65 aa7.19□□□□□ -1.26
VPS4B-206ENST00000591475 KLKP1Q107X0 134 aa7.19□□□□□ -1.26
VPS4B-206ENST00000591475 HIGD2BQ4VC39 106 aa7.19□□□□□ -1.26
VPS4B-206ENST00000591475 MRAPQ8TCY5 172 aa7.18□□□□□ -1.26
VPS4B-206ENST00000591475 TM2D3Q9BRN9 247 aa7.18□□□□□ -1.26
VPS4B-206ENST00000591475 SCXQ7RTU7 201 aa7.17□□□□□ -1.26
VPS4B-206ENST00000591475 LINC00528Q8N1L1 170 aa7.17□□□□□ -1.26
VPS4B-206ENST00000591475 RETNQ9HD89 108 aa7.17□□□□□ -1.26
VPS4B-206ENST00000591475 Q5XG85 94 aa7.17□□□□□ -1.26
VPS4B-206ENST00000591475 Q6ZRU5 148 aa7.17□□□□□ -1.26
VPS4B-206ENST00000591475 WFDC10BQ8IUB3 73 aa7.17□□□□□ -1.26
VPS4B-206ENST00000591475 SERP1Q9Y6X1 66 aa7.17□□□□□ -1.26
VPS4B-206ENST00000591475 KRTAP26-1Q6PEX3 210 aa7.16□□□□□ -1.26
VPS4B-206ENST00000591475 C4orf26Q17RF5 130 aa7.15□□□□□ -1.26
VPS4B-206ENST00000591475 SNURFQ9Y675 71 aa7.15□□□□□ -1.26
VPS4B-206ENST00000591475 H3BNG1 76 aa7.15□□□□□ -1.27
VPS4B-206ENST00000591475 C15orf56Q8N910 161 aa7.15□□□□□ -1.27
VPS4B-206ENST00000591475 RMI2Q96E14 147 aa7.15□□□□□ -1.27
VPS4B-206ENST00000591475 MEGF8Q7Z7M0 2845 aa7.14□□□□□ -1.27
VPS4B-206ENST00000591475 EPM2AB3EWF7 344 aa7.14□□□□□ -1.27
VPS4B-206ENST00000591475 B9D2Q9BPU9 175 aa7.14□□□□□ -1.27
VPS4B-206ENST00000591475 NDUFC1O43677 76 aa7.13□□□□□ -1.27
VPS4B-206ENST00000591475 TENM3Q9P273 2699 aa7.13□□□□□ -1.27
VPS4B-206ENST00000591475 F8WEM9 126 aa7.13□□□□□ -1.27
VPS4B-206ENST00000591475 F8WDY8 70 aa7.12□□□□□ -1.27
VPS4B-206ENST00000591475 NREPQ16612 68 aa7.12□□□□□ -1.27
VPS4B-206ENST00000591475 BPY2O14599 106 aa7.11□□□□□ -1.27
VPS4B-206ENST00000591475 HRCT1Q6UXD1 115 aa7.11□□□□□ -1.27
VPS4B-206ENST00000591475 Q6ZRP5 223 aa7.11□□□□□ -1.27
VPS4B-206ENST00000591475 C1orf43Q9BWL3 253 aa7.11□□□□□ -1.27
VPS4B-206ENST00000591475 ERC2-IT1O76042 136 aa7.1□□□□□ -1.27
VPS4B-206ENST00000591475 NKAPP1Q8N9T2 125 aa7.1□□□□□ -1.27
VPS4B-206ENST00000591475 C11orf45Q8TAV5 145 aa7.1□□□□□ -1.27
VPS4B-206ENST00000591475 COL7A1Q02388 2944 aa7.09□□□□□ -1.27
VPS4B-206ENST00000591475 HUWE1Q7Z6Z7 4374 aaKnown RBP7.09□□□□□ -1.27
VPS4B-206ENST00000591475 IGKV4-1P06312 121 aa7.09□□□□□ -1.27
VPS4B-206ENST00000591475 ATP5EP56381 51 aaPredicted RBP7.09□□□□□ -1.27
VPS4B-206ENST00000591475 IGKV2D-24A0A075B6R9 120 aa7.08□□□□□ -1.28
VPS4B-206ENST00000591475 SYCNQ0VAF6 134 aa7.08□□□□□ -1.28
VPS4B-206ENST00000591475 ESRGQ1W209 222 aa7.08□□□□□ -1.28
VPS4B-206ENST00000591475 KCNQ1DNQ9H478 68 aa7.08□□□□□ -1.28
VPS4B-206ENST00000591475 FBN3Q75N90 2809 aa7.08□□□□□ -1.28
VPS4B-206ENST00000591475 Q6ZTC4 211 aa7.08□□□□□ -1.28
VPS4B-206ENST00000591475 Q8N9L7 120 aa7.08□□□□□ -1.28
VPS4B-206ENST00000591475 TMEM254Q8TBM7 123 aa7.08□□□□□ -1.28
VPS4B-206ENST00000591475 DNAH9Q9NYC9 4486 aa7.07□□□□□ -1.28
VPS4B-206ENST00000591475 LINC01556Q5JQF7 62 aa7.06□□□□□ -1.28
VPS4B-206ENST00000591475 Q8N377 158 aa7.06□□□□□ -1.28
VPS4B-206ENST00000591475 DEFB105AQ8NG35 78 aa7.06□□□□□ -1.28
VPS4B-206ENST00000591475 PRKDCP78527 4128 aaKnown RBP7.06□□□□□ -1.28
VPS4B-206ENST00000591475 SMIM26A0A096LP01 95 aa7.06□□□□□ -1.28
VPS4B-206ENST00000591475 C3orf84H3BNL1 204 aa7.06□□□□□ -1.28
VPS4B-206ENST00000591475 C7orf33Q8WU49 177 aa7.06□□□□□ -1.28
VPS4B-206ENST00000591475 STAB2Q8WWQ8 2551 aa7.06□□□□□ -1.28
VPS4B-206ENST00000591475 IGLV5-48A0A075B6I7 105 aa7.05□□□□□ -1.28
VPS4B-206ENST00000591475 SERTAD4-AS1Q5TG53 156 aa7.05□□□□□ -1.28
VPS4B-206ENST00000591475 KRTAP3-3Q9BYR6 98 aa7.05□□□□□ -1.28
VPS4B-206ENST00000591475 KRTAP3-2Q9BYR7 98 aa7.05□□□□□ -1.28
VPS4B-206ENST00000591475 OCR1Q9BZK8 76 aa7.05□□□□□ -1.28
VPS4B-206ENST00000591475 DHRS4-AS1Q9P1J3 65 aa7.05□□□□□ -1.28
VPS4B-206ENST00000591475 DEFB131BA0A096LNP1 70 aa7.04□□□□□ -1.28
VPS4B-206ENST00000591475 A0A1B0GW54 56 aa7.04□□□□□ -1.28
VPS4B-206ENST00000591475 FUSP35637 526 aaKnown RBP eCLIP7.03□□□□□ -1.28
VPS4B-206ENST00000591475 PLA2G2DQ9UNK4 145 aa7.03□□□□□ -1.28
VPS4B-206ENST00000591475 TLX1NBP0CAT3 122 aa7.03□□□□□ -1.28
VPS4B-206ENST00000591475 PRYO14603 147 aa7.02□□□□□ -1.29
VPS4B-206ENST00000591475 Q6ZRX8 168 aa7.02□□□□□ -1.29
VPS4B-206ENST00000591475 A0A0U1RQV1 116 aa7.01□□□□□ -1.29
VPS4B-206ENST00000591475 FP248Q71RG6 208 aaPredicted RBP7.01□□□□□ -1.29
VPS4B-206ENST00000591475 ETDCA0A1B0GVM5 59 aa7□□□□□ -1.29
VPS4B-206ENST00000591475 IGLV5-37A0A075B6J1 123 aa7□□□□□ -1.29
VPS4B-206ENST00000591475 RPL37AP8A6NKH3 93 aa7□□□□□ -1.29
VPS4B-206ENST00000591475 KRTAP4-16G5E9R7 235 aaPredicted RBP7□□□□□ -1.29
VPS4B-206ENST00000591475 DNAH10OSP0CZ25 163 aa7□□□□□ -1.29
VPS4B-206ENST00000591475 Q9BRP9 147 aa7□□□□□ -1.29
VPS4B-206ENST00000591475 IGLV1-50A0A075B6I6 118 aa6.99□□□□□ -1.29
VPS4B-206ENST00000591475 A0A1W2PNM2 257 aa6.99□□□□□ -1.29
VPS4B-206ENST00000591475 C1orf137Q5JT78 98 aa6.99□□□□□ -1.29
VPS4B-206ENST00000591475 SPRR1AP35321 89 aa6.98□□□□□ -1.29
VPS4B-206ENST00000591475 TNP2Q05952 138 aa6.98□□□□□ -1.29
VPS4B-206ENST00000591475 Q8NBF4 154 aa6.98□□□□□ -1.29
VPS4B-206ENST00000591475 FAM168BA1KXE4 195 aa6.97□□□□□ -1.29
VPS4B-206ENST00000591475 SMIM29Q86T20 159 aa6.97□□□□□ -1.29
VPS4B-206ENST00000591475 HIGD2AQ9BW72 106 aa6.97□□□□□ -1.29
VPS4B-206ENST00000591475 ST20-AS1Q8NBB2 130 aa6.96□□□□□ -1.29
VPS4B-206ENST00000591475 LINC00474Q9P2X8 69 aa6.96□□□□□ -1.29
VPS4B-206ENST00000591475 LINC00336Q6ZUF6 198 aa6.96□□□□□ -1.3
VPS4B-206ENST00000591475 SPRR4Q96PI1 79 aa6.96□□□□□ -1.3
VPS4B-206ENST00000591475 FAM30AQ9NZY2 134 aa6.96□□□□□ -1.3
VPS4B-206ENST00000591475 PRO0628Q9UI54 55 aa6.95□□□□□ -1.3
VPS4B-206ENST00000591475 LCE6AA0A183 80 aa6.94□□□□□ -1.3
VPS4B-206ENST00000591475 MRPL55Q7Z7F7 128 aaKnown RBP6.94□□□□□ -1.3
VPS4B-206ENST00000591475 UBE2BP63146 152 aa6.93□□□□□ -1.3
VPS4B-206ENST00000591475 KRTAP7-1Q8IUC3 87 aa6.93□□□□□ -1.3
VPS4B-206ENST00000591475 NUPR2A6NF83 97 aa6.93□□□□□ -1.3
VPS4B-206ENST00000591475 DSCR10P59022 87 aa6.92□□□□□ -1.3
VPS4B-206ENST00000591475 FAM229BQ4G0N7 80 aa6.92□□□□□ -1.3
VPS4B-206ENST00000591475 CASC10Q5T4H9 136 aa6.92□□□□□ -1.3
VPS4B-206ENST00000591475 LINC00588Q9Y4M8 146 aa6.91□□□□□ -1.3
VPS4B-206ENST00000591475 TGP01266 2768 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms