RNA–Protein interactions for RNA: ENST00000590874.5

CAPNS1-211, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-211ENST00000590874 A0A0U1RRA0 63 aa14.43□□□□□ -0.1
CAPNS1-211ENST00000590874 COX8AP10176 69 aa14.42□□□□□ -0.1
CAPNS1-211ENST00000590874 LINC01547P58512 204 aaPredicted RBP14.42□□□□□ -0.1
CAPNS1-211ENST00000590874 UQCR10Q9UDW1 63 aa14.42□□□□□ -0.1
CAPNS1-211ENST00000590874 PRYO14603 147 aa14.4□□□□□ -0.1
CAPNS1-211ENST00000590874 NMUP48645 174 aa14.4□□□□□ -0.1
CAPNS1-211ENST00000590874 DLEU1O43261 78 aa14.39□□□□□ -0.11
CAPNS1-211ENST00000590874 SPRR1AP35321 89 aa14.39□□□□□ -0.11
CAPNS1-211ENST00000590874 SLC25A34Q6PIV7 304 aa14.39□□□□□ -0.11
CAPNS1-211ENST00000590874 SMCR5Q8TEV8 140 aa14.39□□□□□ -0.11
CAPNS1-211ENST00000590874 MIEN1Q9BRT3 115 aa14.39□□□□□ -0.11
CAPNS1-211ENST00000590874 LEPROTO15243 131 aa14.38□□□□□ -0.11
CAPNS1-211ENST00000590874 SPINK1P00995 79 aa14.38□□□□□ -0.11
CAPNS1-211ENST00000590874 C14orf144Q96I85 54 aa14.38□□□□□ -0.11
CAPNS1-211ENST00000590874 NCR3O14931 201 aa14.37□□□□□ -0.11
CAPNS1-211ENST00000590874 KRTAP4-16G5E9R7 235 aaPredicted RBP14.36□□□□□ -0.11
CAPNS1-211ENST00000590874 LCE2DQ5TA82 110 aaPredicted RBP14.36□□□□□ -0.11
CAPNS1-211ENST00000590874 BOD1L2Q8IYS8 172 aa14.36□□□□□ -0.11
CAPNS1-211ENST00000590874 KCNQ1DNQ9H478 68 aa14.36□□□□□ -0.11
CAPNS1-211ENST00000590874 SEC61BP60468 96 aaKnown RBP14.35□□□□□ -0.11
CAPNS1-211ENST00000590874 LINC00483Q53H64 154 aa14.35□□□□□ -0.11
CAPNS1-211ENST00000590874 SMIM13P0DJ93 91 aa14.34□□□□□ -0.11
CAPNS1-211ENST00000590874 DDTP30046 118 aa14.34□□□□□ -0.11
CAPNS1-211ENST00000590874 J3QQQ9 107 aa14.33□□□□□ -0.12
CAPNS1-211ENST00000590874 LGALS3P17931 250 aaKnown RBP14.33□□□□□ -0.12
CAPNS1-211ENST00000590874 PCP2Q8IVA1 136 aa14.33□□□□□ -0.12
CAPNS1-211ENST00000590874 ETDCA0A1B0GVM5 59 aa14.32□□□□□ -0.12
CAPNS1-211ENST00000590874 PCP4L1A6NKN8 68 aa14.32□□□□□ -0.12
CAPNS1-211ENST00000590874 MOBPQ13875 183 aa14.3□□□□□ -0.12
CAPNS1-211ENST00000590874 GAGE2AQ6NT46 116 aa14.3□□□□□ -0.12
CAPNS1-211ENST00000590874 Q8N377 158 aa14.3□□□□□ -0.12
CAPNS1-211ENST00000590874 MIR7-3HGQ8N6C7 128 aa14.3□□□□□ -0.12
CAPNS1-211ENST00000590874 TRBV10-3A0A0K0K1G6 114 aa14.29□□□□□ -0.12
CAPNS1-211ENST00000590874 MYMXA0A1B0GTQ4 84 aa14.29□□□□□ -0.12
CAPNS1-211ENST00000590874 TSPEAR-AS2P59090 65 aa14.29□□□□□ -0.12
CAPNS1-211ENST00000590874 ZNF815PA8K554 130 aa14.28□□□□□ -0.12
CAPNS1-211ENST00000590874 MEIG1Q5JSS6 88 aa14.28□□□□□ -0.12
CAPNS1-211ENST00000590874 IGLV9-49A0A0B4J1Y8 123 aa14.27□□□□□ -0.13
CAPNS1-211ENST00000590874 NDUFA12Q9UI09 145 aa14.27□□□□□ -0.13
CAPNS1-211ENST00000590874 ERC2-IT1O76042 136 aa14.26□□□□□ -0.13
CAPNS1-211ENST00000590874 RPS29P62273 56 aaKnown RBP14.26□□□□□ -0.13
CAPNS1-211ENST00000590874 TTTY13Q9BZ97 58 aa14.26□□□□□ -0.13
CAPNS1-211ENST00000590874 HIGD1BQ9P298 99 aa14.26□□□□□ -0.13
CAPNS1-211ENST00000590874 FSIP2Q5CZC0 6907 aa14.24□□□□□ -0.13
CAPNS1-211ENST00000590874 B5MCH6 92 aa14.24□□□□□ -0.13
CAPNS1-211ENST00000590874 C2orf91Q6ZV80 131 aa14.24□□□□□ -0.13
CAPNS1-211ENST00000590874 XP32Q5T750 250 aa14.22□□□□□ -0.13
CAPNS1-211ENST00000590874 SSBP3-AS1Q7Z2R9 100 aa14.22□□□□□ -0.13
CAPNS1-211ENST00000590874 HERV-K104P63124 156 aa14.21□□□□□ -0.13
CAPNS1-211ENST00000590874 SCGB1D4Q6XE38 83 aa14.21□□□□□ -0.13
CAPNS1-211ENST00000590874 CRCT1Q9UGL9 99 aa14.21□□□□□ -0.13
CAPNS1-211ENST00000590874 SLC25A20O43772 301 aa14.2□□□□□ -0.14
CAPNS1-211ENST00000590874 Q9BRP9 147 aa14.2□□□□□ -0.14
CAPNS1-211ENST00000590874 LCE2CQ5TA81 110 aa14.19□□□□□ -0.14
CAPNS1-211ENST00000590874 LINC00587B1AMM8 73 aa14.17□□□□□ -0.14
CAPNS1-211ENST00000590874 HSD52Q0P140 79 aa14.16□□□□□ -0.14
CAPNS1-211ENST00000590874 TAL2Q16559 108 aa14.16□□□□□ -0.14
CAPNS1-211ENST00000590874 A0A0J9YXY3 114 aa14.15□□□□□ -0.14
CAPNS1-211ENST00000590874 SPANXB1Q9NS25 103 aaPredicted RBP14.15□□□□□ -0.14
CAPNS1-211ENST00000590874 TIMM17BO60830 172 aa14.14□□□□□ -0.15
CAPNS1-211ENST00000590874 Q6ZRX8 168 aa14.14□□□□□ -0.15
CAPNS1-211ENST00000590874 M0R143 59 aa14.12□□□□□ -0.15
CAPNS1-211ENST00000590874 LOC107984156A0A0G2JMH3 177 aa14.11□□□□□ -0.15
CAPNS1-211ENST00000590874 KRTAP19-2Q3LHN2 52 aa14.11□□□□□ -0.15
CAPNS1-211ENST00000590874 ARL17AQ8IVW1 177 aa14.11□□□□□ -0.15
CAPNS1-211ENST00000590874 TRBV10-2A0A0K0K1G8 114 aa14.1□□□□□ -0.15
CAPNS1-211ENST00000590874 C9orf153Q5TBE3 101 aa14.09□□□□□ -0.15
CAPNS1-211ENST00000590874 Q6ZVH6 145 aa14.09□□□□□ -0.15
CAPNS1-211ENST00000590874 HIST1H4GQ99525 98 aa14.08□□□□□ -0.16
CAPNS1-211ENST00000590874 SPANXDQ9BXN6 97 aa14.07□□□□□ -0.16
CAPNS1-211ENST00000590874 SPANXCQ9NY87 97 aa14.07□□□□□ -0.16
CAPNS1-211ENST00000590874 LITAFQ99732 161 aa14.06□□□□□ -0.16
CAPNS1-211ENST00000590874 BVES-AS1Q5T3Y7 98 aa14.05□□□□□ -0.16
CAPNS1-211ENST00000590874 CEND1Q8N111 149 aa14.05□□□□□ -0.16
CAPNS1-211ENST00000590874 IGLV6-57P01721 117 aa14.04□□□□□ -0.16
CAPNS1-211ENST00000590874 HINT1P49773 126 aaPredicted RBP14.04□□□□□ -0.16
CAPNS1-211ENST00000590874 MT1HP80294 61 aa14.04□□□□□ -0.16
CAPNS1-211ENST00000590874 ST20-AS1Q8NBB2 130 aa14.03□□□□□ -0.16
CAPNS1-211ENST00000590874 SNHG12Q9BXW3 62 aa14.03□□□□□ -0.16
CAPNS1-211ENST00000590874 COPS9Q8WXC6 57 aa14.02□□□□□ -0.17
CAPNS1-211ENST00000590874 TRAV23DV6A0A075B6W5 121 aa14.01□□□□□ -0.17
CAPNS1-211ENST00000590874 IFITM1P13164 125 aa14.01□□□□□ -0.17
CAPNS1-211ENST00000590874 S100A7L2Q5SY68 101 aa14.01□□□□□ -0.17
CAPNS1-211ENST00000590874 TMEM238LA0A1B0GVL6 79 aa13.99□□□□□ -0.17
CAPNS1-211ENST00000590874 A6NJY4 79 aa13.99□□□□□ -0.17
CAPNS1-211ENST00000590874 PCOTHQ58A44 107 aa13.99□□□□□ -0.17
CAPNS1-211ENST00000590874 NDUFC2O95298 119 aa13.98□□□□□ -0.17
CAPNS1-211ENST00000590874 BATFQ16520 125 aa13.98□□□□□ -0.17
CAPNS1-211ENST00000590874 ADAMTSL4-AS1Q5T5F5 129 aa13.98□□□□□ -0.17
CAPNS1-211ENST00000590874 IGLV8-61A0A075B6I0 122 aa13.96□□□□□ -0.17
CAPNS1-211ENST00000590874 A6NDN8 102 aa13.96□□□□□ -0.17
CAPNS1-211ENST00000590874 ZNF73O43830 326 aaPredicted RBP13.96□□□□□ -0.17
CAPNS1-211ENST00000590874 FXYD2P54710 66 aa13.96□□□□□ -0.17
CAPNS1-211ENST00000590874 EIF4EBP3O60516 100 aaPredicted RBP13.95□□□□□ -0.18
CAPNS1-211ENST00000590874 SOSTDC1Q6X4U4 206 aa13.95□□□□□ -0.18
CAPNS1-211ENST00000590874 MUSTN1Q8IVN3 82 aa13.94□□□□□ -0.18
CAPNS1-211ENST00000590874 COL5A1-AS1Q5SY13 56 aa13.93□□□□□ -0.18
CAPNS1-211ENST00000590874 LINC00308Q8TCZ7 52 aa13.93□□□□□ -0.18
CAPNS1-211ENST00000590874 C9orf92A6NGG3 77 aa13.92□□□□□ -0.18
CAPNS1-211ENST00000590874 NPC2P61916 151 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms