RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 S100A12P80511 92 aa13.01□□□□□ -0.33
MBD3-208ENST00000590830 Q9BRP9 147 aa13□□□□□ -0.33
MBD3-208ENST00000590830 SPANXCQ9NY87 97 aa13□□□□□ -0.33
MBD3-208ENST00000590830 TRAV23DV6A0A075B6W5 121 aa12.99□□□□□ -0.33
MBD3-208ENST00000590830 PCP2Q8IVA1 136 aa12.99□□□□□ -0.33
MBD3-208ENST00000590830 Q6ZRX8 168 aa12.97□□□□□ -0.33
MBD3-208ENST00000590830 LINC00304Q8N9R0 145 aa12.97□□□□□ -0.33
MBD3-208ENST00000590830 PPDPFQ9H3Y8 114 aa12.97□□□□□ -0.33
MBD3-208ENST00000590830 ZNF706Q9Y5V0 76 aaPredicted RBP12.97□□□□□ -0.33
MBD3-208ENST00000590830 S100A2P29034 98 aa12.96□□□□□ -0.33
MBD3-208ENST00000590830 PRR4Q16378 134 aa12.96□□□□□ -0.33
MBD3-208ENST00000590830 SPANXDQ9BXN6 97 aa12.96□□□□□ -0.33
MBD3-208ENST00000590830 RNF213Q63HN8 5207 aa12.96□□□□□ -0.33
MBD3-208ENST00000590830 ZNF73O43830 326 aaPredicted RBP12.95□□□□□ -0.34
MBD3-208ENST00000590830 SCGB1D4Q6XE38 83 aa12.95□□□□□ -0.34
MBD3-208ENST00000590830 AKR1D1P51857 326 aa12.94□□□□□ -0.34
MBD3-208ENST00000590830 LINC00483Q53H64 154 aa12.94□□□□□ -0.34
MBD3-208ENST00000590830 S100A6P06703 90 aa12.92□□□□□ -0.34
MBD3-208ENST00000590830 SNRPEP62304 92 aaKnown RBP12.92□□□□□ -0.34
MBD3-208ENST00000590830 OR13C6PQ8NH95 151 aa12.92□□□□□ -0.34
MBD3-208ENST00000590830 GAGE2AQ6NT46 116 aa12.91□□□□□ -0.34
MBD3-208ENST00000590830 MUSTN1Q8IVN3 82 aa12.88□□□□□ -0.35
MBD3-208ENST00000590830 LINC00518Q8N0U6 118 aa12.88□□□□□ -0.35
MBD3-208ENST00000590830 JOSD1Q15040 202 aaPredicted RBP12.87□□□□□ -0.35
MBD3-208ENST00000590830 C5orf52A6NGY3 159 aa12.86□□□□□ -0.35
MBD3-208ENST00000590830 IFITM1P13164 125 aa12.86□□□□□ -0.35
MBD3-208ENST00000590830 RETNLBQ9BQ08 111 aa12.86□□□□□ -0.35
MBD3-208ENST00000590830 CBY1Q9Y3M2 126 aa12.86□□□□□ -0.35
MBD3-208ENST00000590830 Q6ZVH6 145 aa12.85□□□□□ -0.35
MBD3-208ENST00000590830 ST20-AS1Q8NBB2 130 aa12.85□□□□□ -0.35
MBD3-208ENST00000590830 Q8NBF4 154 aa12.84□□□□□ -0.35
MBD3-208ENST00000590830 CTAG1AP78358 180 aa12.83□□□□□ -0.36
MBD3-208ENST00000590830 HINT1P49773 126 aaPredicted RBP12.82□□□□□ -0.36
MBD3-208ENST00000590830 SPAG11AQ6PDA7 123 aa12.81□□□□□ -0.36
MBD3-208ENST00000590830 COPS9Q8WXC6 57 aa12.81□□□□□ -0.36
MBD3-208ENST00000590830 C6orf99Q4VX62 202 aa12.8□□□□□ -0.36
MBD3-208ENST00000590830 IGLV9-49A0A0B4J1Y8 123 aa12.79□□□□□ -0.36
MBD3-208ENST00000590830 HSBP1L1C9JCN9 74 aa12.79□□□□□ -0.36
MBD3-208ENST00000590830 SCGB1D1O95968 90 aa12.79□□□□□ -0.36
MBD3-208ENST00000590830 MOBPQ13875 183 aa12.79□□□□□ -0.36
MBD3-208ENST00000590830 ELOF1P60002 83 aaKnown RBP12.78□□□□□ -0.36
MBD3-208ENST00000590830 A6NDN8 102 aa12.77□□□□□ -0.37
MBD3-208ENST00000590830 COX7BP24311 80 aa12.77□□□□□ -0.37
MBD3-208ENST00000590830 C4orf48Q5BLP8 95 aa12.76□□□□□ -0.37
MBD3-208ENST00000590830 SSBP3-AS1Q7Z2R9 100 aa12.76□□□□□ -0.37
MBD3-208ENST00000590830 DHRS4-AS1Q9P1J3 65 aa12.76□□□□□ -0.37
MBD3-208ENST00000590830 SPRR1BP22528 89 aa12.73□□□□□ -0.37
MBD3-208ENST00000590830 TRBV7-6A0A0J9YX20 115 aa12.72□□□□□ -0.37
MBD3-208ENST00000590830 IGLV7-46A0A075B6I9 117 aa12.7□□□□□ -0.38
MBD3-208ENST00000590830 SPINK1P00995 79 aa12.7□□□□□ -0.38
MBD3-208ENST00000590830 TRAV13-2A0A0B4J235 113 aa12.69□□□□□ -0.38
MBD3-208ENST00000590830 SMIM11BQ8TCY0 68 aa12.69□□□□□ -0.38
MBD3-208ENST00000590830 A4D1N5 150 aa12.68□□□□□ -0.38
MBD3-208ENST00000590830 COX8AP10176 69 aa12.68□□□□□ -0.38
MBD3-208ENST00000590830 A0A1B0GWB2 263 aa12.67□□□□□ -0.38
MBD3-208ENST00000590830 C9orf153Q5TBE3 101 aa12.67□□□□□ -0.38
MBD3-208ENST00000590830 TPRXLQ17RH7 258 aa12.64□□□□□ -0.39
MBD3-208ENST00000590830 DEFB105AQ8NG35 78 aa12.64□□□□□ -0.39
MBD3-208ENST00000590830 MUC2Q02817 5179 aa12.63□□□□□ -0.39
MBD3-208ENST00000590830 DLEU1O43261 78 aa12.63□□□□□ -0.39
MBD3-208ENST00000590830 LINC01547P58512 204 aaPredicted RBP12.62□□□□□ -0.39
MBD3-208ENST00000590830 TAL2Q16559 108 aa12.62□□□□□ -0.39
MBD3-208ENST00000590830 Q8N377 158 aa12.62□□□□□ -0.39
MBD3-208ENST00000590830 C14orf144Q96I85 54 aa12.62□□□□□ -0.39
MBD3-208ENST00000590830 RPS29P62273 56 aaKnown RBP12.61□□□□□ -0.39
MBD3-208ENST00000590830 FP248Q71RG6 208 aaPredicted RBP12.61□□□□□ -0.39
MBD3-208ENST00000590830 SMIM29Q86T20 159 aa12.6□□□□□ -0.39
MBD3-208ENST00000590830 HIST1H4GQ99525 98 aa12.6□□□□□ -0.39
MBD3-208ENST00000590830 LAMTOR3Q9UHA4 124 aa12.6□□□□□ -0.39
MBD3-208ENST00000590830 PAM16Q9Y3D7 125 aa12.6□□□□□ -0.39
MBD3-208ENST00000590830 MUC17Q685J3 4493 aa12.6□□□□□ -0.39
MBD3-208ENST00000590830 TEX49A0A1B0GTD5 131 aa12.59□□□□□ -0.39
MBD3-208ENST00000590830 SLC25A34Q6PIV7 304 aa12.59□□□□□ -0.39
MBD3-208ENST00000590830 Q1RN00 199 aa12.58□□□□□ -0.4
MBD3-208ENST00000590830 SPATA45Q537H7 98 aa12.58□□□□□ -0.4
MBD3-208ENST00000590830 IGLV5-48A0A075B6I7 105 aa12.57□□□□□ -0.4
MBD3-208ENST00000590830 C12orf57Q99622 126 aa12.57□□□□□ -0.4
MBD3-208ENST00000590830 CDIP1Q9H305 208 aa12.56□□□□□ -0.4
MBD3-208ENST00000590830 SLC25A20O43772 301 aa12.54□□□□□ -0.4
MBD3-208ENST00000590830 VAMP8Q9BV40 100 aa12.54□□□□□ -0.4
MBD3-208ENST00000590830 KRTAP13-3Q3SY46 172 aa12.53□□□□□ -0.4
MBD3-208ENST00000590830 LINC00575Q6W349 94 aa12.53□□□□□ -0.4
MBD3-208ENST00000590830 C2orf91Q6ZV80 131 aa12.53□□□□□ -0.4
MBD3-208ENST00000590830 VAMP3Q15836 100 aa12.52□□□□□ -0.41
MBD3-208ENST00000590830 HRCT1Q6UXD1 115 aa12.52□□□□□ -0.41
MBD3-208ENST00000590830 HIGD1BQ9P298 99 aa12.52□□□□□ -0.41
MBD3-208ENST00000590830 NHP2Q9NX24 153 aaKnown RBP12.51□□□□□ -0.41
MBD3-208ENST00000590830 CFC1BP0CG36 223 aa12.49□□□□□ -0.41
MBD3-208ENST00000590830 CFC1P0CG37 223 aa12.49□□□□□ -0.41
MBD3-208ENST00000590830 PRO1933Q9H354 126 aa12.48□□□□□ -0.41
MBD3-208ENST00000590830 A0A0G2JQZ4 141 aa12.47□□□□□ -0.41
MBD3-208ENST00000590830 PYY3Q5JQD4 70 aa12.47□□□□□ -0.41
MBD3-208ENST00000590830 hADV29S1A0JD25 119 aa12.45□□□□□ -0.42
MBD3-208ENST00000590830 CD164Q04900 197 aa12.43□□□□□ -0.42
MBD3-208ENST00000590830 Q6ZQY7 126 aa12.43□□□□□ -0.42
MBD3-208ENST00000590830 TMA7Q9Y2S6 64 aaKnown RBP12.43□□□□□ -0.42
MBD3-208ENST00000590830 H7C2G1 150 aa12.42□□□□□ -0.42
MBD3-208ENST00000590830 CEND1Q8N111 149 aa12.4□□□□□ -0.42
MBD3-208ENST00000590830 LIMD2Q9BT23 127 aa12.4□□□□□ -0.42
MBD3-208ENST00000590830 A0A0B4J2C4 111 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms