RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 ERC2-IT1O76042 136 aa10.46□□□□□ -0.73
CIRBP-227ENST00000590188 IGLV6-57P01721 117 aa10.46□□□□□ -0.73
CIRBP-227ENST00000590188 LINC00308Q8TCZ7 52 aa10.46□□□□□ -0.73
CIRBP-227ENST00000590188 C20orf202A1L168 122 aa10.45□□□□□ -0.74
CIRBP-227ENST00000590188 ANKRD39Q53RE8 183 aa10.44□□□□□ -0.74
CIRBP-227ENST00000590188 GAGE2AQ6NT46 116 aa10.44□□□□□ -0.74
CIRBP-227ENST00000590188 Q9BRP9 147 aa10.44□□□□□ -0.74
CIRBP-227ENST00000590188 TIMM17BO60830 172 aa10.43□□□□□ -0.74
CIRBP-227ENST00000590188 OR13C6PQ8NH95 151 aa10.43□□□□□ -0.74
CIRBP-227ENST00000590188 Q6ZRX8 168 aa10.42□□□□□ -0.74
CIRBP-227ENST00000590188 SPANXCQ9NY87 97 aa10.42□□□□□ -0.74
CIRBP-227ENST00000590188 ZNF73O43830 326 aaPredicted RBP10.41□□□□□ -0.74
CIRBP-227ENST00000590188 S100A6P06703 90 aa10.4□□□□□ -0.74
CIRBP-227ENST00000590188 SCGB1D4Q6XE38 83 aa10.4□□□□□ -0.74
CIRBP-227ENST00000590188 Q8NBF4 154 aa10.39□□□□□ -0.75
CIRBP-227ENST00000590188 TMA7Q9Y2S6 64 aaKnown RBP10.39□□□□□ -0.75
CIRBP-227ENST00000590188 IGLV9-49A0A0B4J1Y8 123 aa10.38□□□□□ -0.75
CIRBP-227ENST00000590188 LINC00483Q53H64 154 aa10.38□□□□□ -0.75
CIRBP-227ENST00000590188 JOSD1Q15040 202 aaPredicted RBP10.36□□□□□ -0.75
CIRBP-227ENST00000590188 C4orf48Q5BLP8 95 aa10.36□□□□□ -0.75
CIRBP-227ENST00000590188 PCP2Q8IVA1 136 aa10.36□□□□□ -0.75
CIRBP-227ENST00000590188 HIST3H2BBQ8N257 126 aa10.36□□□□□ -0.75
CIRBP-227ENST00000590188 S100A2P29034 98 aa10.35□□□□□ -0.75
CIRBP-227ENST00000590188 MOBPQ13875 183 aa10.35□□□□□ -0.75
CIRBP-227ENST00000590188 ST20-AS1Q8NBB2 130 aa10.35□□□□□ -0.75
CIRBP-227ENST00000590188 SPANXDQ9BXN6 97 aa10.35□□□□□ -0.75
CIRBP-227ENST00000590188 HINT1P49773 126 aaPredicted RBP10.34□□□□□ -0.75
CIRBP-227ENST00000590188 HIST1H2BLQ99880 126 aa10.34□□□□□ -0.75
CIRBP-227ENST00000590188 SPAG11AQ6PDA7 123 aa10.33□□□□□ -0.76
CIRBP-227ENST00000590188 CBY1Q9Y3M2 126 aa10.33□□□□□ -0.76
CIRBP-227ENST00000590188 SNRPEP62304 92 aaKnown RBP10.32□□□□□ -0.76
CIRBP-227ENST00000590188 IGLV7-46A0A075B6I9 117 aa10.31□□□□□ -0.76
CIRBP-227ENST00000590188 AKR1D1P51857 326 aa10.3□□□□□ -0.76
CIRBP-227ENST00000590188 C9orf153Q5TBE3 101 aa10.3□□□□□ -0.76
CIRBP-227ENST00000590188 MUSTN1Q8IVN3 82 aa10.3□□□□□ -0.76
CIRBP-227ENST00000590188 LINC00518Q8N0U6 118 aa10.3□□□□□ -0.76
CIRBP-227ENST00000590188 C6orf99Q4VX62 202 aa10.29□□□□□ -0.76
CIRBP-227ENST00000590188 CTAG1AP78358 180 aa10.28□□□□□ -0.76
CIRBP-227ENST00000590188 IFITM1P13164 125 aa10.27□□□□□ -0.77
CIRBP-227ENST00000590188 COX7BP24311 80 aa10.27□□□□□ -0.77
CIRBP-227ENST00000590188 A6NDN8 102 aa10.26□□□□□ -0.77
CIRBP-227ENST00000590188 COPS9Q8WXC6 57 aa10.26□□□□□ -0.77
CIRBP-227ENST00000590188 C5orf52A6NGY3 159 aa10.25□□□□□ -0.77
CIRBP-227ENST00000590188 ELOF1P60002 83 aaKnown RBP10.25□□□□□ -0.77
CIRBP-227ENST00000590188 SSBP3-AS1Q7Z2R9 100 aa10.25□□□□□ -0.77
CIRBP-227ENST00000590188 DHRS4-AS1Q9P1J3 65 aa10.25□□□□□ -0.77
CIRBP-227ENST00000590188 MUC17Q685J3 4493 aa10.24□□□□□ -0.77
CIRBP-227ENST00000590188 HSBP1L1C9JCN9 74 aa10.24□□□□□ -0.77
CIRBP-227ENST00000590188 SPINK1P00995 79 aa10.24□□□□□ -0.77
CIRBP-227ENST00000590188 Q6ZVH6 145 aa10.24□□□□□ -0.77
CIRBP-227ENST00000590188 CDIP1Q9H305 208 aa10.24□□□□□ -0.77
CIRBP-227ENST00000590188 TPRXLQ17RH7 258 aa10.22□□□□□ -0.77
CIRBP-227ENST00000590188 MUC2Q02817 5179 aa10.22□□□□□ -0.77
CIRBP-227ENST00000590188 SCGB1D1O95968 90 aa10.21□□□□□ -0.77
CIRBP-227ENST00000590188 DEFB105AQ8NG35 78 aa10.21□□□□□ -0.77
CIRBP-227ENST00000590188 SPRR1BP22528 89 aa10.18□□□□□ -0.78
CIRBP-227ENST00000590188 TAL2Q16559 108 aa10.18□□□□□ -0.78
CIRBP-227ENST00000590188 FP248Q71RG6 208 aaPredicted RBP10.18□□□□□ -0.78
CIRBP-227ENST00000590188 TRAV13-2A0A0B4J235 113 aa10.17□□□□□ -0.78
CIRBP-227ENST00000590188 A0A1B0GWB2 263 aa10.17□□□□□ -0.78
CIRBP-227ENST00000590188 Q1RN00 199 aa10.17□□□□□ -0.78
CIRBP-227ENST00000590188 HRCT1Q6UXD1 115 aa10.17□□□□□ -0.78
CIRBP-227ENST00000590188 Q8N377 158 aa10.17□□□□□ -0.78
CIRBP-227ENST00000590188 SLC25A34Q6PIV7 304 aa10.16□□□□□ -0.78
CIRBP-227ENST00000590188 SMIM11BQ8TCY0 68 aa10.16□□□□□ -0.78
CIRBP-227ENST00000590188 LAMTOR3Q9UHA4 124 aa10.16□□□□□ -0.78
CIRBP-227ENST00000590188 TRBV7-6A0A0J9YX20 115 aa10.15□□□□□ -0.78
CIRBP-227ENST00000590188 RPS29P62273 56 aaKnown RBP10.14□□□□□ -0.79
CIRBP-227ENST00000590188 A4D1N5 150 aa10.13□□□□□ -0.79
CIRBP-227ENST00000590188 SLC25A20O43772 301 aa10.12□□□□□ -0.79
CIRBP-227ENST00000590188 KRTAP13-3Q3SY46 172 aa10.12□□□□□ -0.79
CIRBP-227ENST00000590188 TEX49A0A1B0GTD5 131 aa10.11□□□□□ -0.79
CIRBP-227ENST00000590188 C12orf57Q99622 126 aa10.11□□□□□ -0.79
CIRBP-227ENST00000590188 LINC01547P58512 204 aaPredicted RBP10.09□□□□□ -0.79
CIRBP-227ENST00000590188 HIST1H4GQ99525 98 aa10.09□□□□□ -0.79
CIRBP-227ENST00000590188 COX8AP10176 69 aa10.08□□□□□ -0.8
CIRBP-227ENST00000590188 SMIM29Q86T20 159 aa10.08□□□□□ -0.8
CIRBP-227ENST00000590188 A0A0G2JQZ4 141 aa10.06□□□□□ -0.8
CIRBP-227ENST00000590188 C14orf144Q96I85 54 aa10.06□□□□□ -0.8
CIRBP-227ENST00000590188 NHP2Q9NX24 153 aaKnown RBP10.06□□□□□ -0.8
CIRBP-227ENST00000590188 PAM16Q9Y3D7 125 aa10.06□□□□□ -0.8
CIRBP-227ENST00000590188 IGLV5-48A0A075B6I7 105 aa10.05□□□□□ -0.8
CIRBP-227ENST00000590188 PRO1933Q9H354 126 aa10.05□□□□□ -0.8
CIRBP-227ENST00000590188 H7C2G1 150 aa10.04□□□□□ -0.8
CIRBP-227ENST00000590188 VAMP3Q15836 100 aa10.04□□□□□ -0.8
CIRBP-227ENST00000590188 SPATA45Q537H7 98 aa10.04□□□□□ -0.8
CIRBP-227ENST00000590188 LIMD2Q9BT23 127 aa10.04□□□□□ -0.8
CIRBP-227ENST00000590188 A0A0U1RQV1 116 aa10.02□□□□□ -0.81
CIRBP-227ENST00000590188 LINC00575Q6W349 94 aa10.02□□□□□ -0.81
CIRBP-227ENST00000590188 FAT4Q6V0I7 4981 aa10.01□□□□□ -0.81
CIRBP-227ENST00000590188 DLEU1O43261 78 aa10□□□□□ -0.81
CIRBP-227ENST00000590188 VAMP8Q9BV40 100 aa10□□□□□ -0.81
CIRBP-227ENST00000590188 hADV29S1A0JD25 119 aa9.99□□□□□ -0.81
CIRBP-227ENST00000590188 PYY3Q5JQD4 70 aa9.99□□□□□ -0.81
CIRBP-227ENST00000590188 Q6ZQY7 126 aa9.99□□□□□ -0.81
CIRBP-227ENST00000590188 CD164Q04900 197 aa9.97□□□□□ -0.81
CIRBP-227ENST00000590188 F8WEM9 126 aa9.95□□□□□ -0.82
CIRBP-227ENST00000590188 CFC1BP0CG36 223 aa9.95□□□□□ -0.82
CIRBP-227ENST00000590188 CFC1P0CG37 223 aa9.95□□□□□ -0.82
CIRBP-227ENST00000590188 C2orf91Q6ZV80 131 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms