RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 DNAH3Q8TD57 4116 aa13.63□□□□□ -0.23
ZNF554-203ENST00000590116 DPH3Q96FX2 82 aa13.61□□□□□ -0.23
ZNF554-203ENST00000590116 KRTAP24-1Q3LI83 254 aa13.61□□□□□ -0.23
ZNF554-203ENST00000590116 DNAH1Q9P2D7 4330 aa13.6□□□□□ -0.23
ZNF554-203ENST00000590116 F8WDY8 70 aa13.6□□□□□ -0.23
ZNF554-203ENST00000590116 DEFB105AQ8NG35 78 aa13.6□□□□□ -0.23
ZNF554-203ENST00000590116 C7orf33Q8WU49 177 aa13.6□□□□□ -0.23
ZNF554-203ENST00000590116 RPS28P62857 69 aaKnown RBP13.59□□□□□ -0.23
ZNF554-203ENST00000590116 CASC10Q5T4H9 136 aa13.59□□□□□ -0.23
ZNF554-203ENST00000590116 KCNQ1DNQ9H478 68 aa13.59□□□□□ -0.23
ZNF554-203ENST00000590116 TRAV7A0A075B6U4 112 aa13.58□□□□□ -0.23
ZNF554-203ENST00000590116 DNAH10OSP0CZ25 163 aa13.58□□□□□ -0.23
ZNF554-203ENST00000590116 FAM168BA1KXE4 195 aa13.57□□□□□ -0.24
ZNF554-203ENST00000590116 PRB2P02812 416 aaPredicted RBP13.57□□□□□ -0.24
ZNF554-203ENST00000590116 RPL37AP8A6NKH3 93 aa13.56□□□□□ -0.24
ZNF554-203ENST00000590116 BCE1O60756 84 aa13.56□□□□□ -0.24
ZNF554-203ENST00000590116 FAM19A5Q7Z5A7 132 aaPredicted RBP13.56□□□□□ -0.24
ZNF554-203ENST00000590116 OXTP01178 125 aa13.56□□□□□ -0.24
ZNF554-203ENST00000590116 Q8N9L7 120 aa13.55□□□□□ -0.24
ZNF554-203ENST00000590116 BAHCC1Q9P281 2608 aa13.53□□□□□ -0.24
ZNF554-203ENST00000590116 C3orf84H3BNL1 204 aa13.52□□□□□ -0.24
ZNF554-203ENST00000590116 Q8N377 158 aa13.52□□□□□ -0.25
ZNF554-203ENST00000590116 LINC00588Q9Y4M8 146 aa13.52□□□□□ -0.25
ZNF554-203ENST00000590116 NBEAL1Q6ZS30 2694 aa13.51□□□□□ -0.25
ZNF554-203ENST00000590116 SNURFQ9Y675 71 aa13.51□□□□□ -0.25
ZNF554-203ENST00000590116 HUWE1Q7Z6Z7 4374 aaKnown RBP13.5□□□□□ -0.25
ZNF554-203ENST00000590116 TLX1NBP0CAT3 122 aa13.5□□□□□ -0.25
ZNF554-203ENST00000590116 LYSTQ99698 3801 aa13.5□□□□□ -0.25
ZNF554-203ENST00000590116 MRAPQ8TCY5 172 aa13.49□□□□□ -0.25
ZNF554-203ENST00000590116 DNAH10Q8IVF4 4471 aa13.49□□□□□ -0.25
ZNF554-203ENST00000590116 TM2D3Q9BRN9 247 aa13.49□□□□□ -0.25
ZNF554-203ENST00000590116 NREPQ16612 68 aa13.48□□□□□ -0.25
ZNF554-203ENST00000590116 Q6ZRX8 168 aa13.48□□□□□ -0.25
ZNF554-203ENST00000590116 Q9BRP9 147 aa13.47□□□□□ -0.25
ZNF554-203ENST00000590116 H7BZZ5 65 aa13.46□□□□□ -0.25
ZNF554-203ENST00000590116 KRTAP7-1Q8IUC3 87 aa13.46□□□□□ -0.25
ZNF554-203ENST00000590116 PLA2G2DQ9UNK4 145 aa13.46□□□□□ -0.25
ZNF554-203ENST00000590116 RMI2Q96E14 147 aa13.46□□□□□ -0.26
ZNF554-203ENST00000590116 BPY2O14599 106 aa13.45□□□□□ -0.26
ZNF554-203ENST00000590116 KLKP1Q107X0 134 aa13.45□□□□□ -0.26
ZNF554-203ENST00000590116 ST20-AS1Q8NBB2 130 aa13.45□□□□□ -0.26
ZNF554-203ENST00000590116 DHRS4-AS1Q9P1J3 65 aa13.45□□□□□ -0.26
ZNF554-203ENST00000590116 IGLV1-50A0A075B6I6 118 aa13.45□□□□□ -0.26
ZNF554-203ENST00000590116 IGLV5-48A0A075B6I7 105 aa13.44□□□□□ -0.26
ZNF554-203ENST00000590116 FAM236DA0A1B0GTK5 79 aa13.44□□□□□ -0.26
ZNF554-203ENST00000590116 ETDCA0A1B0GVM5 59 aa13.44□□□□□ -0.26
ZNF554-203ENST00000590116 KRTAP4-16G5E9R7 235 aaPredicted RBP13.44□□□□□ -0.26
ZNF554-203ENST00000590116 FAM236CP0DP71 79 aa13.44□□□□□ -0.26
ZNF554-203ENST00000590116 COL6A5A8TX70 2615 aa13.43□□□□□ -0.26
ZNF554-203ENST00000590116 PRYO14603 147 aa13.42□□□□□ -0.26
ZNF554-203ENST00000590116 IGKV4-1P06312 121 aa13.42□□□□□ -0.26
ZNF554-203ENST00000590116 IGLV5-37A0A075B6J1 123 aa13.41□□□□□ -0.26
ZNF554-203ENST00000590116 SPRR1AP35321 89 aa13.4□□□□□ -0.26
ZNF554-203ENST00000590116 ERC2-IT1O76042 136 aa13.38□□□□□ -0.27
ZNF554-203ENST00000590116 MRPL55Q7Z7F7 128 aaKnown RBP13.38□□□□□ -0.27
ZNF554-203ENST00000590116 FUSP35637 526 aaKnown RBP eCLIP13.37□□□□□ -0.27
ZNF554-203ENST00000590116 A0A1W2PNM2 257 aa13.36□□□□□ -0.27
ZNF554-203ENST00000590116 F8WEM9 126 aa13.36□□□□□ -0.27
ZNF554-203ENST00000590116 C1orf137Q5JT78 98 aa13.35□□□□□ -0.27
ZNF554-203ENST00000590116 DNAH9Q9NYC9 4486 aa13.35□□□□□ -0.27
ZNF554-203ENST00000590116 TNP2Q05952 138 aa13.34□□□□□ -0.27
ZNF554-203ENST00000590116 UBE2BP63146 152 aa13.34□□□□□ -0.27
ZNF554-203ENST00000590116 TMEM254Q8TBM7 123 aa13.31□□□□□ -0.28
ZNF554-203ENST00000590116 Q8NBF4 154 aa13.29□□□□□ -0.28
ZNF554-203ENST00000590116 A0A0G2JQZ4 141 aa13.29□□□□□ -0.28
ZNF554-203ENST00000590116 A0A1W2PNN7 141 aa13.29□□□□□ -0.28
ZNF554-203ENST00000590116 C4orf26Q17RF5 130 aa13.29□□□□□ -0.28
ZNF554-203ENST00000590116 OCR1Q9BZK8 76 aa13.29□□□□□ -0.28
ZNF554-203ENST00000590116 COL7A1Q02388 2944 aa13.28□□□□□ -0.28
ZNF554-203ENST00000590116 K7EIL1 84 aa13.28□□□□□ -0.28
ZNF554-203ENST00000590116 REG3GQ6UW15 175 aa13.28□□□□□ -0.28
ZNF554-203ENST00000590116 Q5XG85 94 aa13.28□□□□□ -0.28
ZNF554-203ENST00000590116 SERP1Q9Y6X1 66 aa13.28□□□□□ -0.28
ZNF554-203ENST00000590116 STAB2Q8WWQ8 2551 aa13.27□□□□□ -0.28
ZNF554-203ENST00000590116 CSMD3Q7Z407 3707 aa13.27□□□□□ -0.29
ZNF554-203ENST00000590116 A0A1B0GW54 56 aa13.27□□□□□ -0.29
ZNF554-203ENST00000590116 NDUFC1O43677 76 aa13.27□□□□□ -0.29
ZNF554-203ENST00000590116 IGKV2-24A0A0C4DH68 120 aa13.26□□□□□ -0.29
ZNF554-203ENST00000590116 KRTAP1-5Q9BYS1 174 aa13.26□□□□□ -0.29
ZNF554-203ENST00000590116 MGAM2Q2M2H8 2515 aa13.26□□□□□ -0.29
ZNF554-203ENST00000590116 SPRR4Q96PI1 79 aa13.23□□□□□ -0.29
ZNF554-203ENST00000590116 A0A096LNI7 61 aa13.22□□□□□ -0.29
ZNF554-203ENST00000590116 EPM2AB3EWF7 344 aa13.22□□□□□ -0.29
ZNF554-203ENST00000590116 SMIM29Q86T20 159 aa13.22□□□□□ -0.29
ZNF554-203ENST00000590116 PRLHP81277 87 aa13.22□□□□□ -0.29
ZNF554-203ENST00000590116 C5orf47Q569G3 176 aa13.22□□□□□ -0.29
ZNF554-203ENST00000590116 HRCT1Q6UXD1 115 aa13.2□□□□□ -0.3
ZNF554-203ENST00000590116 SRRM2Q9UQ35 2752 aaKnown RBP13.2□□□□□ -0.3
ZNF554-203ENST00000590116 FAM30AQ9NZY2 134 aa13.2□□□□□ -0.3
ZNF554-203ENST00000590116 TENM2Q9NT68 2774 aa13.19□□□□□ -0.3
ZNF554-203ENST00000590116 LINC00476Q8WZB0 136 aa13.19□□□□□ -0.3
ZNF554-203ENST00000590116 DNAH7Q8WXX0 4024 aa13.19□□□□□ -0.3
ZNF554-203ENST00000590116 A0A0U1RQV1 116 aa13.18□□□□□ -0.3
ZNF554-203ENST00000590116 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.17□□□□□ -0.3
ZNF554-203ENST00000590116 DSCR10P59022 87 aa13.17□□□□□ -0.3
ZNF554-203ENST00000590116 C16orf90A8MZG2 172 aa13.16□□□□□ -0.3
ZNF554-203ENST00000590116 PSCAO43653 123 aa13.16□□□□□ -0.3
ZNF554-203ENST00000590116 HIGD2AQ9BW72 106 aa13.16□□□□□ -0.3
ZNF554-203ENST00000590116 K7EQZ3 153 aa13.16□□□□□ -0.3
ZNF554-203ENST00000590116 DEFB116Q30KQ4 102 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms