RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 NPC2P61916 151 aa6.18□□□□□ -1.42
CLPTM1-211ENST00000589347 C4orf48Q5BLP8 95 aa6.18□□□□□ -1.42
CLPTM1-211ENST00000589347 SMCR5Q8TEV8 140 aa6.18□□□□□ -1.42
CLPTM1-211ENST00000589347 B5MCH6 92 aa6.17□□□□□ -1.42
CLPTM1-211ENST00000589347 KRTAP4-16G5E9R7 235 aaPredicted RBP6.17□□□□□ -1.42
CLPTM1-211ENST00000589347 HINT1P49773 126 aaPredicted RBP6.17□□□□□ -1.42
CLPTM1-211ENST00000589347 KRTDAPP60985 99 aa6.17□□□□□ -1.42
CLPTM1-211ENST00000589347 SPAG11AQ6PDA7 123 aa6.17□□□□□ -1.42
CLPTM1-211ENST00000589347 C3orf22Q8N5N4 141 aa6.17□□□□□ -1.42
CLPTM1-211ENST00000589347 IGLV6-57P01721 117 aa6.16□□□□□ -1.42
CLPTM1-211ENST00000589347 C3orf79P0CE67 100 aa6.16□□□□□ -1.42
CLPTM1-211ENST00000589347 COA6Q5JTJ3 125 aaKnown RBP6.16□□□□□ -1.42
CLPTM1-211ENST00000589347 Q6ZRX8 168 aa6.16□□□□□ -1.42
CLPTM1-211ENST00000589347 COPS9Q8WXC6 57 aa6.16□□□□□ -1.42
CLPTM1-211ENST00000589347 SPANXCQ9NY87 97 aa6.16□□□□□ -1.42
CLPTM1-211ENST00000589347 PPDPFQ9H3Y8 114 aa6.15□□□□□ -1.42
CLPTM1-211ENST00000589347 ZNF73O43830 326 aaPredicted RBP6.14□□□□□ -1.43
CLPTM1-211ENST00000589347 LINC00483Q53H64 154 aa6.14□□□□□ -1.43
CLPTM1-211ENST00000589347 ADAMTSL4-AS1Q5T5F5 129 aa6.14□□□□□ -1.43
CLPTM1-211ENST00000589347 GAGE2AQ6NT46 116 aa6.14□□□□□ -1.43
CLPTM1-211ENST00000589347 SOSTDC1Q6X4U4 206 aa6.14□□□□□ -1.43
CLPTM1-211ENST00000589347 SCGB1D4Q6XE38 83 aa6.14□□□□□ -1.43
CLPTM1-211ENST00000589347 LINC00308Q8TCZ7 52 aa6.14□□□□□ -1.43
CLPTM1-211ENST00000589347 Q8NBF4 154 aa6.13□□□□□ -1.43
CLPTM1-211ENST00000589347 OR13C6PQ8NH95 151 aa6.13□□□□□ -1.43
CLPTM1-211ENST00000589347 RETNLBQ9BQ08 111 aa6.13□□□□□ -1.43
CLPTM1-211ENST00000589347 LITAFQ99732 161 aa6.12□□□□□ -1.43
CLPTM1-211ENST00000589347 Q9BRP9 147 aa6.12□□□□□ -1.43
CLPTM1-211ENST00000589347 SPANXDQ9BXN6 97 aa6.12□□□□□ -1.43
CLPTM1-211ENST00000589347 IGLV9-49A0A0B4J1Y8 123 aa6.11□□□□□ -1.43
CLPTM1-211ENST00000589347 SPINK1P00995 79 aa6.11□□□□□ -1.43
CLPTM1-211ENST00000589347 MOBPQ13875 183 aa6.11□□□□□ -1.43
CLPTM1-211ENST00000589347 C5orf52A6NGY3 159 aa6.1□□□□□ -1.43
CLPTM1-211ENST00000589347 PCP4L1A6NKN8 68 aa6.1□□□□□ -1.43
CLPTM1-211ENST00000589347 TPRXLQ17RH7 258 aa6.1□□□□□ -1.43
CLPTM1-211ENST00000589347 C9orf153Q5TBE3 101 aa6.1□□□□□ -1.43
CLPTM1-211ENST00000589347 FP248Q71RG6 208 aaPredicted RBP6.1□□□□□ -1.43
CLPTM1-211ENST00000589347 IGLV7-46A0A075B6I9 117 aa6.09□□□□□ -1.43
CLPTM1-211ENST00000589347 EIF4EBP3O60516 100 aaPredicted RBP6.09□□□□□ -1.43
CLPTM1-211ENST00000589347 ERC2-IT1O76042 136 aa6.09□□□□□ -1.43
CLPTM1-211ENST00000589347 SMIM6P0DI80 62 aa6.09□□□□□ -1.43
CLPTM1-211ENST00000589347 IFITM1P13164 125 aa6.09□□□□□ -1.43
CLPTM1-211ENST00000589347 S100A2P29034 98 aa6.09□□□□□ -1.43
CLPTM1-211ENST00000589347 SNRPEP62304 92 aaKnown RBP6.09□□□□□ -1.43
CLPTM1-211ENST00000589347 SLC25A34Q6PIV7 304 aa6.09□□□□□ -1.43
CLPTM1-211ENST00000589347 Q6ZVH6 145 aa6.09□□□□□ -1.43
CLPTM1-211ENST00000589347 SSBP3-AS1Q7Z2R9 100 aa6.09□□□□□ -1.43
CLPTM1-211ENST00000589347 TTTY13Q9BZ97 58 aa6.09□□□□□ -1.43
CLPTM1-211ENST00000589347 CDIP1Q9H305 208 aa6.09□□□□□ -1.43
CLPTM1-211ENST00000589347 DHRS4-AS1Q9P1J3 65 aa6.09□□□□□ -1.43
CLPTM1-211ENST00000589347 CRCT1Q9UGL9 99 aa6.09□□□□□ -1.43
CLPTM1-211ENST00000589347 RPS29P62273 56 aaKnown RBP6.08□□□□□ -1.44
CLPTM1-211ENST00000589347 ATOH7Q8N100 152 aa6.08□□□□□ -1.44
CLPTM1-211ENST00000589347 C12orf57Q99622 126 aa6.08□□□□□ -1.44
CLPTM1-211ENST00000589347 FSIP2Q5CZC0 6907 aa6.07□□□□□ -1.44
CLPTM1-211ENST00000589347 HSBP1L1C9JCN9 74 aa6.07□□□□□ -1.44
CLPTM1-211ENST00000589347 ANKRD39Q53RE8 183 aa6.07□□□□□ -1.44
CLPTM1-211ENST00000589347 COX7BP24311 80 aa6.06□□□□□ -1.44
CLPTM1-211ENST00000589347 ELOF1P60002 83 aaKnown RBP6.06□□□□□ -1.44
CLPTM1-211ENST00000589347 LCE2DQ5TA82 110 aaPredicted RBP6.06□□□□□ -1.44
CLPTM1-211ENST00000589347 C6orf99Q4VX62 202 aa6.05□□□□□ -1.44
CLPTM1-211ENST00000589347 HIST3H2BBQ8N257 126 aa6.04□□□□□ -1.44
CLPTM1-211ENST00000589347 MUC17Q685J3 4493 aa6.03□□□□□ -1.44
CLPTM1-211ENST00000589347 TRAV13-2A0A0B4J235 113 aa6.03□□□□□ -1.44
CLPTM1-211ENST00000589347 TRBV7-6A0A0J9YX20 115 aa6.03□□□□□ -1.44
CLPTM1-211ENST00000589347 A0A1B0GWB2 263 aa6.03□□□□□ -1.44
CLPTM1-211ENST00000589347 A6NDN8 102 aa6.03□□□□□ -1.44
CLPTM1-211ENST00000589347 PCP2Q8IVA1 136 aa6.03□□□□□ -1.44
CLPTM1-211ENST00000589347 ST20-AS1Q8NBB2 130 aa6.03□□□□□ -1.44
CLPTM1-211ENST00000589347 LAMTOR3Q9UHA4 124 aa6.03□□□□□ -1.44
CLPTM1-211ENST00000589347 SLC25A20O43772 301 aa6.02□□□□□ -1.45
CLPTM1-211ENST00000589347 SPRR1BP22528 89 aa6.02□□□□□ -1.45
CLPTM1-211ENST00000589347 HIST1H2BLQ99880 126 aa6.02□□□□□ -1.45
CLPTM1-211ENST00000589347 LIMD2Q9BT23 127 aa6.02□□□□□ -1.45
CLPTM1-211ENST00000589347 NHP2Q9NX24 153 aaKnown RBP6.02□□□□□ -1.45
CLPTM1-211ENST00000589347 A4D1N5 150 aa6.01□□□□□ -1.45
CLPTM1-211ENST00000589347 TAL2Q16559 108 aa6.01□□□□□ -1.45
CLPTM1-211ENST00000589347 MUSTN1Q8IVN3 82 aa6.01□□□□□ -1.45
CLPTM1-211ENST00000589347 Q8N377 158 aa6□□□□□ -1.45
CLPTM1-211ENST00000589347 TEX49A0A1B0GTD5 131 aa5.99□□□□□ -1.45
CLPTM1-211ENST00000589347 SVIPQ8NHG7 77 aa5.98□□□□□ -1.45
CLPTM1-211ENST00000589347 SCGB1D1O95968 90 aa5.97□□□□□ -1.45
CLPTM1-211ENST00000589347 VAMP3Q15836 100 aa5.97□□□□□ -1.45
CLPTM1-211ENST00000589347 Q1RN00 199 aa5.97□□□□□ -1.45
CLPTM1-211ENST00000589347 KRTAP13-3Q3SY46 172 aa5.97□□□□□ -1.45
CLPTM1-211ENST00000589347 DEFB105AQ8NG35 78 aa5.97□□□□□ -1.45
CLPTM1-211ENST00000589347 PRO1933Q9H354 126 aa5.96□□□□□ -1.46
CLPTM1-211ENST00000589347 CD164Q04900 197 aa5.95□□□□□ -1.46
CLPTM1-211ENST00000589347 SMIM11BQ8TCY0 68 aa5.95□□□□□ -1.46
CLPTM1-211ENST00000589347 IGLV5-48A0A075B6I7 105 aa5.94□□□□□ -1.46
CLPTM1-211ENST00000589347 F8WEM9 126 aa5.94□□□□□ -1.46
CLPTM1-211ENST00000589347 HRCT1Q6UXD1 115 aa5.94□□□□□ -1.46
CLPTM1-211ENST00000589347 H7C2G1 150 aa5.93□□□□□ -1.46
CLPTM1-211ENST00000589347 SEC61BP60468 96 aaKnown RBP5.93□□□□□ -1.46
CLPTM1-211ENST00000589347 HIST1H4GQ99525 98 aa5.93□□□□□ -1.46
CLPTM1-211ENST00000589347 COX8AP10176 69 aa5.92□□□□□ -1.46
CLPTM1-211ENST00000589347 TMEM238LA0A1B0GVL6 79 aa5.9□□□□□ -1.46
CLPTM1-211ENST00000589347 ASB16-AS1Q495Z4 193 aa5.9□□□□□ -1.46
CLPTM1-211ENST00000589347 BVES-AS1Q5T3Y7 98 aa5.9□□□□□ -1.46
CLPTM1-211ENST00000589347 hADV29S1A0JD25 119 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 202.9 ms