RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 LINC00643Q86TS7 51 aa6.54□□□□□ -1.36
VPS25-202ENST00000589219 ZNF73O43830 326 aaPredicted RBP6.53□□□□□ -1.36
VPS25-202ENST00000589219 SLPIP03973 132 aa6.53□□□□□ -1.36
VPS25-202ENST00000589219 COX7BP24311 80 aa6.53□□□□□ -1.36
VPS25-202ENST00000589219 TTC32Q5I0X7 151 aa6.53□□□□□ -1.36
VPS25-202ENST00000589219 SDIM1Q6ZPB5 146 aa6.53□□□□□ -1.36
VPS25-202ENST00000589219 PLA2G2DQ9UNK4 145 aa6.53□□□□□ -1.36
VPS25-202ENST00000589219 ALMS1Q8TCU4 4167 aa6.53□□□□□ -1.36
VPS25-202ENST00000589219 USP17L23D6RBM5 183 aa6.52□□□□□ -1.37
VPS25-202ENST00000589219 ELOF1P60002 83 aaKnown RBP6.52□□□□□ -1.37
VPS25-202ENST00000589219 IMUPQ9GZP8 106 aa6.52□□□□□ -1.37
VPS25-202ENST00000589219 C14orf132Q9NPU4 83 aa6.52□□□□□ -1.37
VPS25-202ENST00000589219 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.51□□□□□ -1.37
VPS25-202ENST00000589219 Q6ZRP5 223 aa6.51□□□□□ -1.37
VPS25-202ENST00000589219 IGLV5-37A0A075B6J1 123 aa6.5□□□□□ -1.37
VPS25-202ENST00000589219 C9orf129Q5T035 196 aaKnown RBP6.5□□□□□ -1.37
VPS25-202ENST00000589219 NKAPP1Q8N9T2 125 aa6.5□□□□□ -1.37
VPS25-202ENST00000589219 CCKP06307 115 aa6.49□□□□□ -1.37
VPS25-202ENST00000589219 SMCR5Q8TEV8 140 aa6.49□□□□□ -1.37
VPS25-202ENST00000589219 Q6ZQY7 126 aa6.48□□□□□ -1.37
VPS25-202ENST00000589219 UBE2DNLQ8IWF7 75 aa6.48□□□□□ -1.37
VPS25-202ENST00000589219 KMT2AQ03164 3969 aa6.47□□□□□ -1.37
VPS25-202ENST00000589219 LOC110117498A0A087WWA1 95 aa6.47□□□□□ -1.37
VPS25-202ENST00000589219 LOC107984640A0A0U1RRK4 108 aa6.47□□□□□ -1.37
VPS25-202ENST00000589219 PRYO14603 147 aa6.47□□□□□ -1.37
VPS25-202ENST00000589219 PDE6GP18545 87 aa6.47□□□□□ -1.37
VPS25-202ENST00000589219 Q6JHZ5 121 aa6.47□□□□□ -1.37
VPS25-202ENST00000589219 ANAPC13Q9BS18 74 aa6.47□□□□□ -1.37
VPS25-202ENST00000589219 KCNQ1DNQ9H478 68 aa6.47□□□□□ -1.37
VPS25-202ENST00000589219 FRAS1Q86XX4 4008 aa6.46□□□□□ -1.37
VPS25-202ENST00000589219 NDUFV3P56181 108 aaKnown RBP6.46□□□□□ -1.38
VPS25-202ENST00000589219 ATP5EP2Q5VTU8 51 aa6.46□□□□□ -1.38
VPS25-202ENST00000589219 APLNQ9ULZ1 77 aa6.46□□□□□ -1.38
VPS25-202ENST00000589219 RBM3P98179 157 aaKnown RBP6.45□□□□□ -1.38
VPS25-202ENST00000589219 C14orf177Q52M58 125 aa6.45□□□□□ -1.38
VPS25-202ENST00000589219 C7orf33Q8WU49 177 aa6.45□□□□□ -1.38
VPS25-202ENST00000589219 LAMTOR3Q9UHA4 124 aa6.45□□□□□ -1.38
VPS25-202ENST00000589219 SERTAD4-AS1Q5TG53 156 aa6.44□□□□□ -1.38
VPS25-202ENST00000589219 PKIGQ9Y2B9 76 aa6.44□□□□□ -1.38
VPS25-202ENST00000589219 CNBPP62633 177 aaKnown RBP6.43□□□□□ -1.38
VPS25-202ENST00000589219 Q6ZQT0 140 aa6.43□□□□□ -1.38
VPS25-202ENST00000589219 DSCR8Q96T75 97 aa6.43□□□□□ -1.38
VPS25-202ENST00000589219 LINC00846Q9NV44 126 aa6.43□□□□□ -1.38
VPS25-202ENST00000589219 PSCAO43653 123 aa6.42□□□□□ -1.38
VPS25-202ENST00000589219 LINC00336Q6ZUF6 198 aa6.42□□□□□ -1.38
VPS25-202ENST00000589219 DHRS4-AS1Q9P1J3 65 aa6.42□□□□□ -1.38
VPS25-202ENST00000589219 SPRR1AP35321 89 aa6.41□□□□□ -1.38
VPS25-202ENST00000589219 KRTAP1-5Q9BYS1 174 aa6.41□□□□□ -1.38
VPS25-202ENST00000589219 UBL5Q9BZL1 73 aa6.41□□□□□ -1.38
VPS25-202ENST00000589219 IGLV1-50A0A075B6I6 118 aa6.4□□□□□ -1.38
VPS25-202ENST00000589219 FAM236AA0A1B0GUQ0 79 aa6.4□□□□□ -1.38
VPS25-202ENST00000589219 FAM236BA0A1B0GV22 79 aa6.4□□□□□ -1.38
VPS25-202ENST00000589219 TRBV7-4A0A0J9YYF1 115 aa6.39□□□□□ -1.39
VPS25-202ENST00000589219 ETDCA0A1B0GVM5 59 aa6.39□□□□□ -1.39
VPS25-202ENST00000589219 Q6ZRX8 168 aa6.39□□□□□ -1.39
VPS25-202ENST00000589219 MRPL55Q7Z7F7 128 aaKnown RBP6.39□□□□□ -1.39
VPS25-202ENST00000589219 C16orf90A8MZG2 172 aa6.38□□□□□ -1.39
VPS25-202ENST00000589219 B5MCH6 92 aa6.38□□□□□ -1.39
VPS25-202ENST00000589219 KRTAP4-16G5E9R7 235 aaPredicted RBP6.38□□□□□ -1.39
VPS25-202ENST00000589219 FAM19A5Q7Z5A7 132 aaPredicted RBP6.38□□□□□ -1.39
VPS25-202ENST00000589219 NBDYA0A0U1RRE5 68 aa6.37□□□□□ -1.39
VPS25-202ENST00000589219 FAM168BA1KXE4 195 aa6.37□□□□□ -1.39
VPS25-202ENST00000589219 HIST1H4AP62805 103 aaKnown RBP6.37□□□□□ -1.39
VPS25-202ENST00000589219 TNP2Q05952 138 aa6.37□□□□□ -1.39
VPS25-202ENST00000589219 VPS13DQ5THJ4 4388 aa6.36□□□□□ -1.39
VPS25-202ENST00000589219 IGKV3D-7A0A0C4DH55 119 aa6.36□□□□□ -1.39
VPS25-202ENST00000589219 ATOX1O00244 68 aa6.36□□□□□ -1.39
VPS25-202ENST00000589219 KRTAP7-1Q8IUC3 87 aa6.36□□□□□ -1.39
VPS25-202ENST00000589219 DNAH10Q8IVF4 4471 aa6.35□□□□□ -1.39
VPS25-202ENST00000589219 M0R2N4 97 aa6.35□□□□□ -1.39
VPS25-202ENST00000589219 HECTD4Q9Y4D8 3996 aa6.35□□□□□ -1.39
VPS25-202ENST00000589219 IGLV5-48A0A075B6I7 105 aa6.34□□□□□ -1.39
VPS25-202ENST00000589219 A0A096LNI7 61 aa6.34□□□□□ -1.39
VPS25-202ENST00000589219 RPL37AP8A6NKH3 93 aa6.34□□□□□ -1.39
VPS25-202ENST00000589219 REG3GQ6UW15 175 aa6.34□□□□□ -1.39
VPS25-202ENST00000589219 KRTAP17-1Q9BYP8 105 aa6.34□□□□□ -1.39
VPS25-202ENST00000589219 DNAH6Q9C0G6 4158 aa6.33□□□□□ -1.4
VPS25-202ENST00000589219 XP32Q5T750 250 aa6.33□□□□□ -1.4
VPS25-202ENST00000589219 Q9BRP9 147 aa6.33□□□□□ -1.4
VPS25-202ENST00000589219 A0A1B0GVY2 172 aa6.32□□□□□ -1.4
VPS25-202ENST00000589219 A0A1B0GW54 56 aa6.32□□□□□ -1.4
VPS25-202ENST00000589219 RTL8CO15255 209 aa6.32□□□□□ -1.4
VPS25-202ENST00000589219 LINC01547P58512 204 aaPredicted RBP6.32□□□□□ -1.4
VPS25-202ENST00000589219 Q6ZR54 194 aa6.32□□□□□ -1.4
VPS25-202ENST00000589219 Q6ZVQ6 151 aa6.32□□□□□ -1.4
VPS25-202ENST00000589219 Q8N377 158 aa6.32□□□□□ -1.4
VPS25-202ENST00000589219 LINC00474Q9P2X8 69 aa6.32□□□□□ -1.4
VPS25-202ENST00000589219 HERC2O95714 4834 aa6.32□□□□□ -1.4
VPS25-202ENST00000589219 IGKV2-24A0A0C4DH68 120 aa6.31□□□□□ -1.4
VPS25-202ENST00000589219 LRCOL1A6NCL2 159 aa6.31□□□□□ -1.4
VPS25-202ENST00000589219 UBE2BP63146 152 aa6.31□□□□□ -1.4
VPS25-202ENST00000589219 CXCL6P80162 114 aa6.31□□□□□ -1.4
VPS25-202ENST00000589219 C1orf134Q5TEV5 83 aa6.31□□□□□ -1.4
VPS25-202ENST00000589219 Q6ZRN7 208 aaPredicted RBP6.31□□□□□ -1.4
VPS25-202ENST00000589219 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.3□□□□□ -1.4
VPS25-202ENST00000589219 CCDC179H3BU77 68 aa6.3□□□□□ -1.4
VPS25-202ENST00000589219 C9orf163Q8N9P6 203 aa6.3□□□□□ -1.4
VPS25-202ENST00000589219 UQCRQO14949 82 aa6.29□□□□□ -1.4
VPS25-202ENST00000589219 KIAA1109Q2LD37 5005 aa6.29□□□□□ -1.4
VPS25-202ENST00000589219 A0A1W2PNN7 141 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms