RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 H0YGX0 51 aa16.41■□□□□ 0.22
SCAMP4-210ENST00000588555 ATXN8Q156A1 80 aa16.4■□□□□ 0.22
SCAMP4-210ENST00000588555 CBY1Q9Y3M2 126 aa16.4■□□□□ 0.22
SCAMP4-210ENST00000588555 DNAH8Q96JB1 4490 aa16.38■□□□□ 0.21
SCAMP4-210ENST00000588555 DIRC1Q969H9 104 aa16.38■□□□□ 0.21
SCAMP4-210ENST00000588555 A0A087WYN8 130 aa16.36■□□□□ 0.21
SCAMP4-210ENST00000588555 PHF5AQ7RTV0 110 aaKnown RBP16.36■□□□□ 0.21
SCAMP4-210ENST00000588555 DPH3Q96FX2 82 aa16.36■□□□□ 0.21
SCAMP4-210ENST00000588555 PRYO14603 147 aa16.35■□□□□ 0.21
SCAMP4-210ENST00000588555 TRBV7-6A0A0J9YX20 115 aa16.33■□□□□ 0.21
SCAMP4-210ENST00000588555 SPRR1AP35321 89 aa16.33■□□□□ 0.2
SCAMP4-210ENST00000588555 PKHD1P08F94 4074 aa16.32■□□□□ 0.2
SCAMP4-210ENST00000588555 PLAC8Q9NZF1 115 aa16.32■□□□□ 0.2
SCAMP4-210ENST00000588555 PRO0461Q9UI25 63 aa16.32■□□□□ 0.2
SCAMP4-210ENST00000588555 RYR3Q15413 4870 aa16.32■□□□□ 0.2
SCAMP4-210ENST00000588555 KRTAP4-16G5E9R7 235 aaPredicted RBP16.31■□□□□ 0.2
SCAMP4-210ENST00000588555 ELOF1P60002 83 aaKnown RBP16.31■□□□□ 0.2
SCAMP4-210ENST00000588555 TRACP01848 142 aa16.31■□□□□ 0.2
SCAMP4-210ENST00000588555 KRTAP10-1P60331 282 aa16.31■□□□□ 0.2
SCAMP4-210ENST00000588555 MTURNQ8N3F0 131 aa16.31■□□□□ 0.2
SCAMP4-210ENST00000588555 A0A1B0GVY2 172 aa16.3■□□□□ 0.2
SCAMP4-210ENST00000588555 KRTAP11-1Q8IUC1 163 aa16.3■□□□□ 0.2
SCAMP4-210ENST00000588555 COX7BP24311 80 aa16.29■□□□□ 0.2
SCAMP4-210ENST00000588555 LINC00575Q6W349 94 aa16.28■□□□□ 0.2
SCAMP4-210ENST00000588555 FAM30AQ9NZY2 134 aa16.28■□□□□ 0.2
SCAMP4-210ENST00000588555 Q6ZSA8 131 aa16.28■□□□□ 0.2
SCAMP4-210ENST00000588555 C9JAW5 83 aa16.27■□□□□ 0.2
SCAMP4-210ENST00000588555 REG3GQ6UW15 175 aa16.26■□□□□ 0.19
SCAMP4-210ENST00000588555 LINC00528Q8N1L1 170 aa16.26■□□□□ 0.19
SCAMP4-210ENST00000588555 A0A1B0GX51 115 aa16.26■□□□□ 0.19
SCAMP4-210ENST00000588555 F8W1H4 67 aa16.25■□□□□ 0.19
SCAMP4-210ENST00000588555 UBE2BP63146 152 aa16.25■□□□□ 0.19
SCAMP4-210ENST00000588555 SMCPP49901 116 aaPredicted RBP16.24■□□□□ 0.19
SCAMP4-210ENST00000588555 B5MCH6 92 aa16.22■□□□□ 0.19
SCAMP4-210ENST00000588555 SLC25A20O43772 301 aa16.21■□□□□ 0.19
SCAMP4-210ENST00000588555 LRP1BQ9NZR2 4599 aa16.21■□□□□ 0.19
SCAMP4-210ENST00000588555 ETDCA0A1B0GVM5 59 aa16.21■□□□□ 0.18
SCAMP4-210ENST00000588555 Q6ZRX8 168 aa16.21■□□□□ 0.18
SCAMP4-210ENST00000588555 hADV29S1A0JD25 119 aa16.2■□□□□ 0.18
SCAMP4-210ENST00000588555 DNAL4O96015 105 aa16.19■□□□□ 0.18
SCAMP4-210ENST00000588555 CIRBP-AS1Q8TBR5 109 aa16.18■□□□□ 0.18
SCAMP4-210ENST00000588555 DYNC1H1Q14204 4646 aaKnown RBP16.18■□□□□ 0.18
SCAMP4-210ENST00000588555 LINC01600Q96MT4 127 aa16.17■□□□□ 0.18
SCAMP4-210ENST00000588555 SCXQ7RTU7 201 aa16.15■□□□□ 0.18
SCAMP4-210ENST00000588555 Q9BRP9 147 aa16.15■□□□□ 0.18
SCAMP4-210ENST00000588555 H3BT86 120 aa16.15■□□□□ 0.18
SCAMP4-210ENST00000588555 SNCGO76070 127 aa16.15■□□□□ 0.18
SCAMP4-210ENST00000588555 ANKRD29Q8N6D5 301 aa16.15■□□□□ 0.18
SCAMP4-210ENST00000588555 INAFM2P0DMQ5 153 aa16.14■□□□□ 0.17
SCAMP4-210ENST00000588555 BAALC-AS2P0C853 105 aa16.11■□□□□ 0.17
SCAMP4-210ENST00000588555 FAM19A1Q7Z5A9 133 aa16.11■□□□□ 0.17
SCAMP4-210ENST00000588555 Q6ZQY7 126 aa16.1■□□□□ 0.17
SCAMP4-210ENST00000588555 DHRS4-AS1Q9P1J3 65 aa16.1■□□□□ 0.17
SCAMP4-210ENST00000588555 ORMDL1Q9P0S3 153 aa16.1■□□□□ 0.17
SCAMP4-210ENST00000588555 PRLHP81277 87 aa16.09■□□□□ 0.17
SCAMP4-210ENST00000588555 BCE1O60756 84 aa16.08■□□□□ 0.17
SCAMP4-210ENST00000588555 HAMPP81172 84 aa16.08■□□□□ 0.16
SCAMP4-210ENST00000588555 ETDBQ3ZM63 59 aa16.08■□□□□ 0.16
SCAMP4-210ENST00000588555 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.08■□□□□ 0.16
SCAMP4-210ENST00000588555 H0Y9J4 135 aa16.07■□□□□ 0.16
SCAMP4-210ENST00000588555 SMCR5Q8TEV8 140 aa16.07■□□□□ 0.16
SCAMP4-210ENST00000588555 PSORS1C2Q9UIG4 136 aa16.07■□□□□ 0.16
SCAMP4-210ENST00000588555 KRTAP13-1Q8IUC0 172 aa16.05■□□□□ 0.16
SCAMP4-210ENST00000588555 ERC2-IT1O76042 136 aa16.04■□□□□ 0.16
SCAMP4-210ENST00000588555 TEN1Q86WV5 123 aa16.03■□□□□ 0.16
SCAMP4-210ENST00000588555 SRRM2Q9UQ35 2752 aaKnown RBP16.02■□□□□ 0.16
SCAMP4-210ENST00000588555 TMEM256-PLSCR3K7ERE1 68 aa16■□□□□ 0.15
SCAMP4-210ENST00000588555 UBE2AP49459 152 aa16■□□□□ 0.15
SCAMP4-210ENST00000588555 OCIAD2Q56VL3 154 aa16■□□□□ 0.15
SCAMP4-210ENST00000588555 APOBP04114 4563 aaKnown RBP15.99■□□□□ 0.15
SCAMP4-210ENST00000588555 HIGD2AQ9BW72 106 aa15.98■□□□□ 0.15
SCAMP4-210ENST00000588555 C1orf137Q5JT78 98 aa15.98■□□□□ 0.15
SCAMP4-210ENST00000588555 LINC01547P58512 204 aaPredicted RBP15.97■□□□□ 0.15
SCAMP4-210ENST00000588555 ST20-AS1Q8NBB2 130 aa15.96■□□□□ 0.15
SCAMP4-210ENST00000588555 H3BQ85 93 aa15.95■□□□□ 0.14
SCAMP4-210ENST00000588555 TEX49A0A1B0GTD5 131 aa15.94■□□□□ 0.14
SCAMP4-210ENST00000588555 XGP55808 180 aa15.93■□□□□ 0.14
SCAMP4-210ENST00000588555 IGLV5-48A0A075B6I7 105 aa15.92■□□□□ 0.14
SCAMP4-210ENST00000588555 GHRHP01286 108 aa15.92■□□□□ 0.14
SCAMP4-210ENST00000588555 Q8N377 158 aa15.91■□□□□ 0.14
SCAMP4-210ENST00000588555 DEFB105AQ8NG35 78 aa15.9■□□□□ 0.14
SCAMP4-210ENST00000588555 PPDPFLQ8WWR9 84 aa15.89■□□□□ 0.13
SCAMP4-210ENST00000588555 OBSCN-AS1Q96MR7 158 aa15.89■□□□□ 0.13
SCAMP4-210ENST00000588555 ZNF861PO60384 105 aa15.87■□□□□ 0.13
SCAMP4-210ENST00000588555 IGLV7-43P04211 117 aa15.87■□□□□ 0.13
SCAMP4-210ENST00000588555 VPS13BQ7Z7G8 4022 aa15.86■□□□□ 0.13
SCAMP4-210ENST00000588555 LAMTOR3Q9UHA4 124 aa15.83■□□□□ 0.12
SCAMP4-210ENST00000588555 NDUFV3P56181 108 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-210ENST00000588555 A0A1B0GV72 72 aa15.81■□□□□ 0.12
SCAMP4-210ENST00000588555 JMJD7-PLA2G4BH0Y9G9 81 aa15.8■□□□□ 0.12
SCAMP4-210ENST00000588555 C3orf22Q8N5N4 141 aa15.8■□□□□ 0.12
SCAMP4-210ENST00000588555 SPRR1BP22528 89 aa15.78■□□□□ 0.12
SCAMP4-210ENST00000588555 SMIM29Q86T20 159 aa15.78■□□□□ 0.12
SCAMP4-210ENST00000588555 C14orf132Q9NPU4 83 aa15.77■□□□□ 0.12
SCAMP4-210ENST00000588555 FAT1Q14517 4588 aa15.75■□□□□ 0.11
SCAMP4-210ENST00000588555 GAGE2AQ6NT46 116 aa15.75■□□□□ 0.11
SCAMP4-210ENST00000588555 RBM3P98179 157 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-210ENST00000588555 SPRR4Q96PI1 79 aa15.75■□□□□ 0.11
SCAMP4-210ENST00000588555 K7ERU9 68 aa15.73■□□□□ 0.11
SCAMP4-210ENST00000588555 SMR3BP02814 79 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms