RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 Q6ZR54 194 aa9.65□□□□□ -0.86
CCDC43-203ENST00000588210 USP17L23D6RBM5 183 aa9.64□□□□□ -0.87
CCDC43-203ENST00000588210 H3BQ85 93 aa9.64□□□□□ -0.87
CCDC43-203ENST00000588210 Q6ZQT0 140 aa9.64□□□□□ -0.87
CCDC43-203ENST00000588210 RBM3P98179 157 aaKnown RBP9.63□□□□□ -0.87
CCDC43-203ENST00000588210 SERP2Q8N6R1 65 aa9.63□□□□□ -0.87
CCDC43-203ENST00000588210 TRAV23DV6A0A075B6W5 121 aa9.63□□□□□ -0.87
CCDC43-203ENST00000588210 WFDC10BQ8IUB3 73 aa9.63□□□□□ -0.87
CCDC43-203ENST00000588210 TRBV10-3A0A0K0K1G6 114 aa9.62□□□□□ -0.87
CCDC43-203ENST00000588210 UBL5Q9BZL1 73 aa9.62□□□□□ -0.87
CCDC43-203ENST00000588210 DIRC1Q969H9 104 aa9.62□□□□□ -0.87
CCDC43-203ENST00000588210 DNAH10OSP0CZ25 163 aa9.61□□□□□ -0.87
CCDC43-203ENST00000588210 Q6ZQY7 126 aa9.6□□□□□ -0.87
CCDC43-203ENST00000588210 LAMTOR3Q9UHA4 124 aa9.6□□□□□ -0.87
CCDC43-203ENST00000588210 KRTAP26-1Q6PEX3 210 aa9.6□□□□□ -0.87
CCDC43-203ENST00000588210 XAGE1AQ9HD64 81 aa9.6□□□□□ -0.87
CCDC43-203ENST00000588210 LINC01556Q5JQF7 62 aa9.59□□□□□ -0.87
CCDC43-203ENST00000588210 C1orf134Q5TEV5 83 aa9.59□□□□□ -0.87
CCDC43-203ENST00000588210 TRBV7-6A0A0J9YX20 115 aa9.59□□□□□ -0.87
CCDC43-203ENST00000588210 KRTAP1-5Q9BYS1 174 aa9.59□□□□□ -0.87
CCDC43-203ENST00000588210 DNAH2Q9P225 4427 aa9.58□□□□□ -0.88
CCDC43-203ENST00000588210 ZNF73O43830 326 aaPredicted RBP9.58□□□□□ -0.88
CCDC43-203ENST00000588210 PDE6GP18545 87 aa9.58□□□□□ -0.88
CCDC43-203ENST00000588210 CAMK2N2Q96S95 79 aa9.58□□□□□ -0.88
CCDC43-203ENST00000588210 VPREB1P12018 145 aa9.57□□□□□ -0.88
CCDC43-203ENST00000588210 COX7BP24311 80 aa9.57□□□□□ -0.88
CCDC43-203ENST00000588210 ELOF1P60002 83 aaKnown RBP9.57□□□□□ -0.88
CCDC43-203ENST00000588210 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.57□□□□□ -0.88
CCDC43-203ENST00000588210 HIGD2BQ4VC39 106 aa9.57□□□□□ -0.88
CCDC43-203ENST00000588210 DSCR8Q96T75 97 aa9.57□□□□□ -0.88
CCDC43-203ENST00000588210 FRAS1Q86XX4 4008 aa9.56□□□□□ -0.88
CCDC43-203ENST00000588210 DNAH10Q8IVF4 4471 aa9.56□□□□□ -0.88
CCDC43-203ENST00000588210 FAM19A1Q7Z5A9 133 aa9.56□□□□□ -0.88
CCDC43-203ENST00000588210 GHRHP01286 108 aa9.55□□□□□ -0.88
CCDC43-203ENST00000588210 C15orf56Q8N910 161 aa9.55□□□□□ -0.88
CCDC43-203ENST00000588210 RTL8CO15255 209 aa9.55□□□□□ -0.88
CCDC43-203ENST00000588210 LINC00336Q6ZUF6 198 aa9.55□□□□□ -0.88
CCDC43-203ENST00000588210 M0R378 163 aa9.54□□□□□ -0.88
CCDC43-203ENST00000588210 Q6ZRU5 148 aa9.54□□□□□ -0.88
CCDC43-203ENST00000588210 CYSTM1Q9H1C7 97 aa9.54□□□□□ -0.88
CCDC43-203ENST00000588210 NDUFC2-KCTD14E9PQ53 114 aa9.54□□□□□ -0.88
CCDC43-203ENST00000588210 TRBV7-4A0A0J9YYF1 115 aa9.52□□□□□ -0.88
CCDC43-203ENST00000588210 Q6ZVQ6 151 aa9.52□□□□□ -0.88
CCDC43-203ENST00000588210 TMEM258P61165 79 aa9.52□□□□□ -0.89
CCDC43-203ENST00000588210 F8WDY8 70 aa9.51□□□□□ -0.89
CCDC43-203ENST00000588210 LINC01547P58512 204 aaPredicted RBP9.51□□□□□ -0.89
CCDC43-203ENST00000588210 DNAH17Q9UFH2 4485 aa9.5□□□□□ -0.89
CCDC43-203ENST00000588210 FAT2Q9NYQ8 4349 aa9.5□□□□□ -0.89
CCDC43-203ENST00000588210 J3KT08 172 aa9.5□□□□□ -0.89
CCDC43-203ENST00000588210 BCE1O60756 84 aa9.5□□□□□ -0.89
CCDC43-203ENST00000588210 LINC00528Q8N1L1 170 aa9.5□□□□□ -0.89
CCDC43-203ENST00000588210 C1orf43Q9BWL3 253 aa9.5□□□□□ -0.89
CCDC43-203ENST00000588210 CXCL6P80162 114 aa9.49□□□□□ -0.89
CCDC43-203ENST00000588210 Q6ZRN7 208 aaPredicted RBP9.48□□□□□ -0.89
CCDC43-203ENST00000588210 RPS28P62857 69 aaKnown RBP9.47□□□□□ -0.89
CCDC43-203ENST00000588210 EPPK1P58107 5090 aaKnown RBP9.46□□□□□ -0.89
CCDC43-203ENST00000588210 HAMPP81172 84 aa9.46□□□□□ -0.89
CCDC43-203ENST00000588210 Q6ZRP5 223 aa9.46□□□□□ -0.89
CCDC43-203ENST00000588210 TNP2Q05952 138 aa9.46□□□□□ -0.9
CCDC43-203ENST00000588210 IGKV2D-24A0A075B6R9 120 aa9.44□□□□□ -0.9
CCDC43-203ENST00000588210 SYCNQ0VAF6 134 aa9.44□□□□□ -0.9
CCDC43-203ENST00000588210 RMI2Q96E14 147 aa9.43□□□□□ -0.9
CCDC43-203ENST00000588210 TRAV7A0A075B6U4 112 aa9.43□□□□□ -0.9
CCDC43-203ENST00000588210 LOC107984640A0A0U1RRK4 108 aa9.43□□□□□ -0.9
CCDC43-203ENST00000588210 A0A1B0GVY2 172 aa9.43□□□□□ -0.9
CCDC43-203ENST00000588210 PSCAO43653 123 aa9.43□□□□□ -0.9
CCDC43-203ENST00000588210 DPH3Q96FX2 82 aa9.41□□□□□ -0.9
CCDC43-203ENST00000588210 KCNQ1DNQ9H478 68 aa9.41□□□□□ -0.9
CCDC43-203ENST00000588210 HECTD4Q9Y4D8 3996 aa9.4□□□□□ -0.9
CCDC43-203ENST00000588210 TLX1NBP0CAT3 122 aa9.4□□□□□ -0.91
CCDC43-203ENST00000588210 NKAPP1Q8N9T2 125 aa9.4□□□□□ -0.91
CCDC43-203ENST00000588210 C20orf197Q8N268 126 aa9.39□□□□□ -0.91
CCDC43-203ENST00000588210 PLA2G2DQ9UNK4 145 aa9.39□□□□□ -0.91
CCDC43-203ENST00000588210 PKD1P98161 4303 aa9.39□□□□□ -0.91
CCDC43-203ENST00000588210 A0A087WTM6 91 aa9.38□□□□□ -0.91
CCDC43-203ENST00000588210 SERTAD4-AS1Q5TG53 156 aa9.38□□□□□ -0.91
CCDC43-203ENST00000588210 C7orf33Q8WU49 177 aa9.38□□□□□ -0.91
CCDC43-203ENST00000588210 DNAH11Q96DT5 4516 aa9.37□□□□□ -0.91
CCDC43-203ENST00000588210 LRCOL1A6NCL2 159 aa9.36□□□□□ -0.91
CCDC43-203ENST00000588210 FAM19A5Q7Z5A7 132 aaPredicted RBP9.36□□□□□ -0.91
CCDC43-203ENST00000588210 SCXQ7RTU7 201 aa9.36□□□□□ -0.91
CCDC43-203ENST00000588210 IGLV5-37A0A075B6J1 123 aa9.35□□□□□ -0.91
CCDC43-203ENST00000588210 PKHD1P08F94 4074 aa9.34□□□□□ -0.91
CCDC43-203ENST00000588210 KLKP1Q107X0 134 aa9.34□□□□□ -0.91
CCDC43-203ENST00000588210 PRYO14603 147 aa9.33□□□□□ -0.92
CCDC43-203ENST00000588210 Q8N377 158 aa9.33□□□□□ -0.92
CCDC43-203ENST00000588210 BIRC6Q9NR09 4857 aa9.33□□□□□ -0.92
CCDC43-203ENST00000588210 DHRS4-AS1Q9P1J3 65 aa9.33□□□□□ -0.92
CCDC43-203ENST00000588210 IGLV5-48A0A075B6I7 105 aa9.32□□□□□ -0.92
CCDC43-203ENST00000588210 OXTP01178 125 aa9.32□□□□□ -0.92
CCDC43-203ENST00000588210 Q6ZRX8 168 aa9.32□□□□□ -0.92
CCDC43-203ENST00000588210 KRTAP4-16G5E9R7 235 aaPredicted RBP9.32□□□□□ -0.92
CCDC43-203ENST00000588210 H7BZZ5 65 aa9.32□□□□□ -0.92
CCDC43-203ENST00000588210 SPRR1AP35321 89 aa9.32□□□□□ -0.92
CCDC43-203ENST00000588210 KRTAP10-2P60368 255 aa9.32□□□□□ -0.92
CCDC43-203ENST00000588210 FAM236DA0A1B0GTK5 79 aa9.31□□□□□ -0.92
CCDC43-203ENST00000588210 FAM236CP0DP71 79 aa9.31□□□□□ -0.92
CCDC43-203ENST00000588210 DYNC1H1Q14204 4646 aaKnown RBP9.3□□□□□ -0.92
CCDC43-203ENST00000588210 IGLV1-50A0A075B6I6 118 aa9.3□□□□□ -0.92
CCDC43-203ENST00000588210 IGKV4-1P06312 121 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms