RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 HIST1H2BLQ99880 126 aa13.76□□□□□ -0.21
CHAF1A-205ENST00000587580 UBR4Q5T4S7 5183 aa13.75□□□□□ -0.21
CHAF1A-205ENST00000587580 S100A6P06703 90 aa13.75□□□□□ -0.21
CHAF1A-205ENST00000587580 SCGB1D4Q6XE38 83 aa13.75□□□□□ -0.21
CHAF1A-205ENST00000587580 LRP2P98164 4655 aa13.75□□□□□ -0.21
CHAF1A-205ENST00000587580 C3orf22Q8N5N4 141 aa13.73□□□□□ -0.21
CHAF1A-205ENST00000587580 Q6ZRX8 168 aa13.72□□□□□ -0.21
CHAF1A-205ENST00000587580 LINC00304Q8N9R0 145 aa13.72□□□□□ -0.21
CHAF1A-205ENST00000587580 ZNF73O43830 326 aaPredicted RBP13.7□□□□□ -0.22
CHAF1A-205ENST00000587580 PRR4Q16378 134 aa13.7□□□□□ -0.22
CHAF1A-205ENST00000587580 PCP2Q8IVA1 136 aa13.7□□□□□ -0.22
CHAF1A-205ENST00000587580 OR13C6PQ8NH95 151 aa13.7□□□□□ -0.22
CHAF1A-205ENST00000587580 SPANXDQ9BXN6 97 aa13.7□□□□□ -0.22
CHAF1A-205ENST00000587580 Q9BRP9 147 aa13.69□□□□□ -0.22
CHAF1A-205ENST00000587580 PPDPFQ9H3Y8 114 aa13.69□□□□□ -0.22
CHAF1A-205ENST00000587580 CBY1Q9Y3M2 126 aa13.69□□□□□ -0.22
CHAF1A-205ENST00000587580 ERC2-IT1O76042 136 aa13.68□□□□□ -0.22
CHAF1A-205ENST00000587580 SNRPEP62304 92 aaKnown RBP13.68□□□□□ -0.22
CHAF1A-205ENST00000587580 JOSD1Q15040 202 aaPredicted RBP13.66□□□□□ -0.22
CHAF1A-205ENST00000587580 GAGE2AQ6NT46 116 aa13.65□□□□□ -0.22
CHAF1A-205ENST00000587580 LINC00483Q53H64 154 aa13.64□□□□□ -0.23
CHAF1A-205ENST00000587580 LINC00518Q8N0U6 118 aa13.64□□□□□ -0.23
CHAF1A-205ENST00000587580 COPS9Q8WXC6 57 aa13.64□□□□□ -0.23
CHAF1A-205ENST00000587580 HINT1P49773 126 aaPredicted RBP13.63□□□□□ -0.23
CHAF1A-205ENST00000587580 HSBP1L1C9JCN9 74 aa13.62□□□□□ -0.23
CHAF1A-205ENST00000587580 IFITM1P13164 125 aa13.62□□□□□ -0.23
CHAF1A-205ENST00000587580 Q6ZVH6 145 aa13.61□□□□□ -0.23
CHAF1A-205ENST00000587580 LPAP08519 4548 aa13.6□□□□□ -0.23
CHAF1A-205ENST00000587580 MUSTN1Q8IVN3 82 aa13.58□□□□□ -0.24
CHAF1A-205ENST00000587580 C5orf52A6NGY3 159 aa13.57□□□□□ -0.24
CHAF1A-205ENST00000587580 CTAG1AP78358 180 aa13.56□□□□□ -0.24
CHAF1A-205ENST00000587580 Q8NBF4 154 aa13.56□□□□□ -0.24
CHAF1A-205ENST00000587580 RETNLBQ9BQ08 111 aa13.56□□□□□ -0.24
CHAF1A-205ENST00000587580 SCGB1D1O95968 90 aa13.55□□□□□ -0.24
CHAF1A-205ENST00000587580 SPAG11AQ6PDA7 123 aa13.55□□□□□ -0.24
CHAF1A-205ENST00000587580 IGLV9-49A0A0B4J1Y8 123 aa13.54□□□□□ -0.24
CHAF1A-205ENST00000587580 C6orf99Q4VX62 202 aa13.54□□□□□ -0.24
CHAF1A-205ENST00000587580 MOBPQ13875 183 aa13.53□□□□□ -0.24
CHAF1A-205ENST00000587580 C4orf48Q5BLP8 95 aa13.53□□□□□ -0.24
CHAF1A-205ENST00000587580 ST20-AS1Q8NBB2 130 aa13.53□□□□□ -0.24
CHAF1A-205ENST00000587580 A6NDN8 102 aa13.52□□□□□ -0.25
CHAF1A-205ENST00000587580 COX7BP24311 80 aa13.52□□□□□ -0.25
CHAF1A-205ENST00000587580 DHRS4-AS1Q9P1J3 65 aa13.52□□□□□ -0.25
CHAF1A-205ENST00000587580 ELOF1P60002 83 aaKnown RBP13.51□□□□□ -0.25
CHAF1A-205ENST00000587580 TRAV13-2A0A0B4J235 113 aa13.46□□□□□ -0.25
CHAF1A-205ENST00000587580 C9orf153Q5TBE3 101 aa13.46□□□□□ -0.25
CHAF1A-205ENST00000587580 SSBP3-AS1Q7Z2R9 100 aa13.46□□□□□ -0.25
CHAF1A-205ENST00000587580 TRBV7-6A0A0J9YX20 115 aa13.44□□□□□ -0.26
CHAF1A-205ENST00000587580 A0A1B0GWB2 263 aa13.43□□□□□ -0.26
CHAF1A-205ENST00000587580 SPINK1P00995 79 aa13.43□□□□□ -0.26
CHAF1A-205ENST00000587580 COX8AP10176 69 aa13.41□□□□□ -0.26
CHAF1A-205ENST00000587580 SPRR1BP22528 89 aa13.41□□□□□ -0.26
CHAF1A-205ENST00000587580 IGLV7-46A0A075B6I9 117 aa13.4□□□□□ -0.26
CHAF1A-205ENST00000587580 A4D1N5 150 aa13.4□□□□□ -0.26
CHAF1A-205ENST00000587580 SLC25A34Q6PIV7 304 aa13.39□□□□□ -0.27
CHAF1A-205ENST00000587580 SMIM11BQ8TCY0 68 aa13.39□□□□□ -0.27
CHAF1A-205ENST00000587580 RNF213Q63HN8 5207 aa13.36□□□□□ -0.27
CHAF1A-205ENST00000587580 TAL2Q16559 108 aa13.36□□□□□ -0.27
CHAF1A-205ENST00000587580 DEFB105AQ8NG35 78 aa13.36□□□□□ -0.27
CHAF1A-205ENST00000587580 HIST1H4GQ99525 98 aa13.36□□□□□ -0.27
CHAF1A-205ENST00000587580 LAMTOR3Q9UHA4 124 aa13.36□□□□□ -0.27
CHAF1A-205ENST00000587580 RPS29P62273 56 aaKnown RBP13.35□□□□□ -0.27
CHAF1A-205ENST00000587580 TPRXLQ17RH7 258 aa13.35□□□□□ -0.27
CHAF1A-205ENST00000587580 PAM16Q9Y3D7 125 aa13.35□□□□□ -0.27
CHAF1A-205ENST00000587580 DLEU1O43261 78 aa13.34□□□□□ -0.27
CHAF1A-205ENST00000587580 SPATA45Q537H7 98 aa13.34□□□□□ -0.27
CHAF1A-205ENST00000587580 FP248Q71RG6 208 aaPredicted RBP13.33□□□□□ -0.28
CHAF1A-205ENST00000587580 C14orf144Q96I85 54 aa13.33□□□□□ -0.28
CHAF1A-205ENST00000587580 VAMP8Q9BV40 100 aa13.32□□□□□ -0.28
CHAF1A-205ENST00000587580 TEX49A0A1B0GTD5 131 aa13.31□□□□□ -0.28
CHAF1A-205ENST00000587580 Q1RN00 199 aa13.31□□□□□ -0.28
CHAF1A-205ENST00000587580 C12orf57Q99622 126 aa13.31□□□□□ -0.28
CHAF1A-205ENST00000587580 NHP2Q9NX24 153 aaKnown RBP13.31□□□□□ -0.28
CHAF1A-205ENST00000587580 Q8N377 158 aa13.3□□□□□ -0.28
CHAF1A-205ENST00000587580 CDIP1Q9H305 208 aa13.3□□□□□ -0.28
CHAF1A-205ENST00000587580 VAMP3Q15836 100 aa13.28□□□□□ -0.28
CHAF1A-205ENST00000587580 IGLV5-48A0A075B6I7 105 aa13.27□□□□□ -0.29
CHAF1A-205ENST00000587580 LINC01547P58512 204 aaPredicted RBP13.27□□□□□ -0.29
CHAF1A-205ENST00000587580 SLC25A20O43772 301 aa13.25□□□□□ -0.29
CHAF1A-205ENST00000587580 HIGD1BQ9P298 99 aa13.25□□□□□ -0.29
CHAF1A-205ENST00000587580 SMIM29Q86T20 159 aa13.24□□□□□ -0.29
CHAF1A-205ENST00000587580 HRCT1Q6UXD1 115 aa13.23□□□□□ -0.29
CHAF1A-205ENST00000587580 LINC00575Q6W349 94 aa13.22□□□□□ -0.29
CHAF1A-205ENST00000587580 C2orf91Q6ZV80 131 aa13.22□□□□□ -0.29
CHAF1A-205ENST00000587580 PRO1933Q9H354 126 aa13.2□□□□□ -0.3
CHAF1A-205ENST00000587580 TMA7Q9Y2S6 64 aaKnown RBP13.2□□□□□ -0.3
CHAF1A-205ENST00000587580 hADV29S1A0JD25 119 aa13.18□□□□□ -0.3
CHAF1A-205ENST00000587580 KRTAP13-3Q3SY46 172 aa13.18□□□□□ -0.3
CHAF1A-205ENST00000587580 LIMD2Q9BT23 127 aa13.18□□□□□ -0.3
CHAF1A-205ENST00000587580 CFC1BP0CG36 223 aa13.17□□□□□ -0.3
CHAF1A-205ENST00000587580 CFC1P0CG37 223 aa13.17□□□□□ -0.3
CHAF1A-205ENST00000587580 PYY3Q5JQD4 70 aa13.17□□□□□ -0.3
CHAF1A-205ENST00000587580 BVES-AS1Q5T3Y7 98 aa13.17□□□□□ -0.3
CHAF1A-205ENST00000587580 RAB37Q96AX2 223 aa13.17□□□□□ -0.3
CHAF1A-205ENST00000587580 H7C2G1 150 aa13.16□□□□□ -0.3
CHAF1A-205ENST00000587580 Q6ZQY7 126 aa13.16□□□□□ -0.3
CHAF1A-205ENST00000587580 A0A0B4J2C4 111 aa13.14□□□□□ -0.31
CHAF1A-205ENST00000587580 CD164Q04900 197 aa13.14□□□□□ -0.31
CHAF1A-205ENST00000587580 CEND1Q8N111 149 aa13.12□□□□□ -0.31
CHAF1A-205ENST00000587580 A0A0G2JQZ4 141 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms